EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000022248 (Gene tree)
Gene ID: 101165397
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC101165397
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 8476 bases
Position: chr8:18865598-18874073
Accession: 101165397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039281	tRNA-synt_2	PF00152.20	7.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039650	-	4725	XM_023957725	ENSORLP00000039281	1574 (aa)	XP_023813493	-

Gene Model

Click here to download ENSORLG00000022248's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola00250	Alanine, aspartate and glutamate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000022248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000022248	si:ch211-256m1.8	100	75.601	ENSAPOG00000007012	si:ch211-256m1.8	100	75.601	Acanthochromis_polyacanthus
ENSORLG00000022248	si:ch211-256m1.8	100	75.631	ENSAOCG00000012258	si:ch211-256m1.8	100	75.631	Amphiprion_ocellaris
ENSORLG00000022248	si:ch211-256m1.8	100	75.694	ENSAPEG00000002724	si:ch211-256m1.8	100	75.694	Amphiprion_percula
ENSORLG00000022248	si:ch211-256m1.8	100	75.142	ENSATEG00000006278	si:ch211-256m1.8	100	75.142	Anabas_testudineus
ENSORLG00000022248	si:ch211-256m1.8	100	76.957	ENSACLG00000011503	si:ch211-256m1.8	100	76.957	Astatotilapia_calliptera
ENSORLG00000022248	si:ch211-256m1.8	100	65.725	ENSAMXG00000038245	si:ch211-256m1.8	100	65.725	Astyanax_mexicanus
ENSORLG00000022248	si:ch211-256m1.8	100	70.518	ENSCSEG00000006255	si:ch211-256m1.8	100	70.518	Cynoglossus_semilaevis
ENSORLG00000022248	si:ch211-256m1.8	100	75.696	ENSCVAG00000003376	si:ch211-256m1.8	100	75.696	Cyprinodon_variegatus
ENSORLG00000022248	si:ch211-256m1.8	100	64.169	ENSDARG00000055172	si:ch211-256m1.8	100	64.254	Danio_rerio
ENSORLG00000022248	si:ch211-256m1.8	100	68.543	ENSELUG00000010546	si:ch211-256m1.8	100	68.543	Esox_lucius
ENSORLG00000022248	si:ch211-256m1.8	100	74.224	ENSFHEG00000005847	si:ch211-256m1.8	100	74.224	Fundulus_heteroclitus
ENSORLG00000022248	si:ch211-256m1.8	100	76.266	ENSGAFG00000010269	si:ch211-256m1.8	100	76.266	Gambusia_affinis
ENSORLG00000022248	si:ch211-256m1.8	100	76.894	ENSHBUG00000014407	si:ch211-256m1.8	100	76.894	Haplochromis_burtoni
ENSORLG00000022248	si:ch211-256m1.8	100	70.019	ENSHCOG00000006884	si:ch211-256m1.8	100	70.679	Hippocampus_comes
ENSORLG00000022248	si:ch211-256m1.8	100	64.119	ENSIPUG00000022659	si:ch211-256m1.8	100	64.119	Ictalurus_punctatus
ENSORLG00000022248	si:ch211-256m1.8	100	77.342	ENSKMAG00000016377	si:ch211-256m1.8	100	77.342	Kryptolebias_marmoratus
ENSORLG00000022248	si:ch211-256m1.8	100	74.811	ENSLBEG00000010639	si:ch211-256m1.8	100	74.811	Labrus_bergylta
ENSORLG00000022248	si:ch211-256m1.8	100	59.925	ENSLOCG00000011127	si:ch211-256m1.8	100	59.925	Lepisosteus_oculatus
ENSORLG00000022248	si:ch211-256m1.8	99	74.192	ENSMAMG00000005651	si:ch211-256m1.8	99	74.192	Mastacembelus_armatus
ENSORLG00000022248	si:ch211-256m1.8	100	76.957	ENSMZEG00005006924	si:ch211-256m1.8	100	76.957	Maylandia_zebra
ENSORLG00000022248	si:ch211-256m1.8	100	71.094	ENSMMOG00000001736	si:ch211-256m1.8	100	71.094	Mola_mola
ENSORLG00000022248	si:ch211-256m1.8	100	76.641	ENSNBRG00000005143	si:ch211-256m1.8	100	76.641	Neolamprologus_brichardi
ENSORLG00000022248	si:ch211-256m1.8	100	98.666	ENSORLG00020000214	si:ch211-256m1.8	100	98.666	Oryzias_latipes_hni
ENSORLG00000022248	si:ch211-256m1.8	100	98.475	ENSORLG00015020297	si:ch211-256m1.8	100	98.696	Oryzias_latipes_hsok
ENSORLG00000022248	si:ch211-256m1.8	100	91.076	ENSOMEG00000004519	si:ch211-256m1.8	100	91.076	Oryzias_melastigma
ENSORLG00000022248	si:ch211-256m1.8	95	66.639	ENSPKIG00000007399	si:ch211-256m1.8	99	66.639	Paramormyrops_kingsleyae
ENSORLG00000022248	si:ch211-256m1.8	100	63.631	ENSPMGG00000007698	si:ch211-256m1.8	100	63.631	Periophthalmus_magnuspinnatus
ENSORLG00000022248	si:ch211-256m1.8	100	76.013	ENSPFOG00000005178	si:ch211-256m1.8	100	76.013	Poecilia_formosa
ENSORLG00000022248	si:ch211-256m1.8	100	75.949	ENSPLAG00000006872	si:ch211-256m1.8	100	75.949	Poecilia_latipinna
ENSORLG00000022248	si:ch211-256m1.8	100	75.886	ENSPMEG00000021815	si:ch211-256m1.8	100	75.886	Poecilia_mexicana
ENSORLG00000022248	si:ch211-256m1.8	100	75.823	ENSPREG00000018669	si:ch211-256m1.8	100	75.823	Poecilia_reticulata
ENSORLG00000022248	si:ch211-256m1.8	100	76.641	ENSPNYG00000018038	si:ch211-256m1.8	100	76.641	Pundamilia_nyererei
ENSORLG00000022248	si:ch211-256m1.8	99	65.406	ENSPNAG00000018965	-	99	65.406	Pygocentrus_nattereri
ENSORLG00000022248	si:ch211-256m1.8	99	66.289	ENSPNAG00000003552	si:ch211-256m1.8	99	66.352	Pygocentrus_nattereri
ENSORLG00000022248	si:ch211-256m1.8	100	64.506	ENSSFOG00015008344	si:ch211-256m1.8	100	64.506	Scleropages_formosus
ENSORLG00000022248	si:ch211-256m1.8	100	74.684	ENSSMAG00000007562	si:ch211-256m1.8	100	74.684	Scophthalmus_maximus
ENSORLG00000022248	si:ch211-256m1.8	100	76.962	ENSSDUG00000018180	si:ch211-256m1.8	100	76.962	Seriola_dumerili
ENSORLG00000022248	si:ch211-256m1.8	100	76.835	ENSSLDG00000020310	si:ch211-256m1.8	100	76.835	Seriola_lalandi_dorsalis
ENSORLG00000022248	si:ch211-256m1.8	100	75.884	ENSSPAG00000013419	si:ch211-256m1.8	100	75.884	Stegastes_partitus
ENSORLG00000022248	si:ch211-256m1.8	100	66.562	ENSTRUG00000023803	si:ch211-256m1.8	100	66.625	Takifugu_rubripes
ENSORLG00000022248	si:ch211-256m1.8	100	76.709	ENSXCOG00000017726	si:ch211-256m1.8	100	76.709	Xiphophorus_couchianus
ENSORLG00000022248	si:ch211-256m1.8	100	76.582	ENSXMAG00000026576	si:ch211-256m1.8	100	76.582	Xiphophorus_maculatus