EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000022253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 5110 bases
Position: chr1:4248708-4253817
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000038812	RVT_1	PF00078.27	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028093	-	816	-	ENSORLP00000038812	271 (aa)	-	-

Gene Model

Click here to download ENSORLG00000022253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000022253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000022253	-	62	93.452	ENSORLG00000025007	-	70	93.452
ENSORLG00000022253	-	51	92.806	ENSORLG00000030475	-	60	90.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000022253	-	51	37.063	ENSHCOG00000010320	-	58	37.063	Hippocampus_comes
ENSORLG00000022253	-	52	31.250	ENSIPUG00000000759	-	65	31.250	Ictalurus_punctatus
ENSORLG00000022253	-	50	30.935	ENSIPUG00000002371	-	52	30.935	Ictalurus_punctatus
ENSORLG00000022253	-	65	31.111	ENSMZEG00005010519	-	70	31.111	Maylandia_zebra
ENSORLG00000022253	-	61	89.157	ENSORLG00020015610	-	73	89.157	Oryzias_latipes_hni
ENSORLG00000022253	-	62	94.611	ENSORLG00020011085	-	59	94.611	Oryzias_latipes_hni
ENSORLG00000022253	-	66	92.697	ENSORLG00015006868	-	77	92.697	Oryzias_latipes_hsok
ENSORLG00000022253	-	59	93.750	ENSORLG00015009826	-	58	93.750	Oryzias_latipes_hsok
ENSORLG00000022253	-	61	90.361	ENSORLG00015002242	-	66	90.361	Oryzias_latipes_hsok
ENSORLG00000022253	-	68	91.803	ENSORLG00015020776	-	72	91.803	Oryzias_latipes_hsok
ENSORLG00000022253	-	68	88.587	ENSORLG00015017583	-	92	88.587	Oryzias_latipes_hsok
ENSORLG00000022253	-	63	94.118	ENSORLG00015001384	-	74	94.118	Oryzias_latipes_hsok
ENSORLG00000022253	-	65	90.055	ENSORLG00015019974	-	65	90.055	Oryzias_latipes_hsok
ENSORLG00000022253	-	69	35.829	ENSPSIG00000001771	-	60	35.829	Pelodiscus_sinensis