EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000022825 (Gene tree)
Gene ID
101155400
Gene Symbol
-
Alias
-
Full Name
transcriptional repressor scratch 1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
10761 bases
Position
chr11:228207-238967
Accession
101155400
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000033147zf-C2H2PF00096.269.4e-2514
ENSORLP00000033147zf-C2H2PF00096.269.4e-2524
ENSORLP00000033147zf-C2H2PF00096.269.4e-2534
ENSORLP00000033147zf-C2H2PF00096.269.4e-2544
ENSORLP00000033147zf-metPF12874.71.4e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000037664-4985XM_004084573ENSORLP00000033147301 (aa)XP_004084621UPI0002A48687
Gene Model
Click here to download ENSORLG00000022825's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000022825's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000022825-6034.532ENSORLG00000012533PRDM155434.532
ENSORLG00000022825-6636.090ENSORLG00000022704-7036.090
ENSORLG00000022825-6237.594ENSORLG00000023094-6837.594
ENSORLG00000022825-6637.143ENSORLG00000001749-8840.602
ENSORLG00000022825-5336.842ENSORLG00000028433-8036.111
ENSORLG00000022825-5137.879ENSORLG00000027418-5337.879
ENSORLG00000022825-5041.772ENSORLG00000009152zbtb416041.772
ENSORLG00000022825-6235.780ENSORLG00000012610znf710b5235.780
ENSORLG00000022825-5434.848ENSORLG00000025719-5934.848
ENSORLG00000022825-5341.584ENSORLG00000029896-7242.857
ENSORLG00000022825-6938.346ENSORLG00000024174-8442.424
ENSORLG00000022825-5339.098ENSORLG00000025540-5637.419
ENSORLG00000022825-5635.971ENSORLG00000024896-7235.971
ENSORLG00000022825-5934.328ENSORLG00000014168-5434.328
ENSORLG00000022825-6339.130ENSORLG00000002268-8839.130
ENSORLG00000022825-5337.594ENSORLG00000027303-6437.594
ENSORLG00000022825-6536.496ENSORLG00000024652-9639.000
ENSORLG00000022825-5145.588ENSORLG00000027186-8345.588
ENSORLG00000022825-9640.678ENSORLG00000017475snai29840.678
ENSORLG00000022825-7338.346ENSORLG00000000247-8538.346
ENSORLG00000022825-5540.000ENSORLG00000025080-9240.000
ENSORLG00000022825-5036.634ENSORLG00000016981-6536.275
ENSORLG00000022825-5441.071ENSORLG00000027974-6941.071
ENSORLG00000022825-5136.765ENSORLG00000022502-8536.232
ENSORLG00000022825-9348.485ENSORLG00000027982-9748.485
ENSORLG00000022825-5038.710ENSORLG00000027271-8838.710
ENSORLG00000022825-5037.267ENSORLG00000012485-5437.594
ENSORLG00000022825-8444.000ENSORLG00000007097-9344.000
ENSORLG00000022825-6839.416ENSORLG00000023806-9543.662
ENSORLG00000022825-9758.514ENSORLG00000024051scrt29758.514
ENSORLG00000022825-5238.596ENSORLG00000030630-8338.596
ENSORLG00000022825-5037.500ENSORLG00000027575-6237.500
ENSORLG00000022825-6333.766ENSORLG00000019331zbtb485733.566
ENSORLG00000022825-6739.098ENSORLG00000027822-9239.098
ENSORLG00000022825-5046.429ENSORLG00000007263-7445.977
ENSORLG00000022825-7940.594ENSORLG00000025717-8442.268
ENSORLG00000022825-5135.294ENSORLG00000027765-6335.294
ENSORLG00000022825-5136.090ENSORLG00000025576-9436.090
ENSORLG00000022825-5436.364ENSORLG00000024399-7547.619
ENSORLG00000022825-9973.090ENSORLG00000025651scrt1b9974.086
ENSORLG00000022825-5639.098ENSORLG00000026852-7238.931
ENSORLG00000022825-5235.294ENSORLG00000012472znf319b6937.121
ENSORLG00000022825-5037.908ENSORLG00000016243-5937.908
ENSORLG00000022825-5339.098ENSORLG00000027053-5637.419
ENSORLG00000022825-5038.519ENSORLG00000007009-9239.759
ENSORLG00000022825-6537.168ENSORLG00000029027-8737.168
ENSORLG00000022825-6638.806ENSORLG00000028323-8649.091
ENSORLG00000022825-7639.286ENSORLG00000028381-8639.516
ENSORLG00000022825-5639.423ENSORLG00000024183-9539.423
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000022825-9974.751ENSAPOG00000009279scrt1b9974.751Acanthochromis_polyacanthus
ENSORLG00000022825-10084.488ENSAPOG00000015197-10084.488Acanthochromis_polyacanthus
ENSORLG00000022825-9761.279ENSAPOG00000003680scrt29661.279Acanthochromis_polyacanthus
ENSORLG00000022825-9754.921ENSACIG00000001296-9657.556Amphilophus_citrinellus
ENSORLG00000022825-10089.439ENSACIG00000006586-10089.439Amphilophus_citrinellus
ENSORLG00000022825-10060.065ENSACIG00000012604scrt29960.065Amphilophus_citrinellus
ENSORLG00000022825-9973.090ENSACIG00000013613scrt1b9973.090Amphilophus_citrinellus
ENSORLG00000022825-9761.279ENSAOCG00000021557scrt29661.279Amphiprion_ocellaris
ENSORLG00000022825-9974.751ENSAOCG00000003910scrt1b9974.751Amphiprion_ocellaris
ENSORLG00000022825-10089.439ENSAOCG00000023304-10089.439Amphiprion_ocellaris
ENSORLG00000022825-9761.279ENSAPEG00000022558scrt29661.279Amphiprion_percula
ENSORLG00000022825-9974.419ENSAPEG00000000869scrt1b9974.419Amphiprion_percula
ENSORLG00000022825-10089.439ENSAPEG00000005677-10089.439Amphiprion_percula
ENSORLG00000022825-10082.508ENSATEG00000011660-10082.508Anabas_testudineus
ENSORLG00000022825-10058.559ENSATEG00000023998scrt29958.559Anabas_testudineus
ENSORLG00000022825-9752.239ENSATEG00000003195-9752.239Anabas_testudineus
ENSORLG00000022825-9973.090ENSATEG00000002302scrt1b9974.419Anabas_testudineus
ENSORLG00000022825-6877.941ENSACAG00000016109SCRT29177.941Anolis_carolinensis
ENSORLG00000022825-9974.419ENSACLG00000007162scrt1b9974.419Astatotilapia_calliptera
ENSORLG00000022825-10088.449ENSACLG00000012046-10088.449Astatotilapia_calliptera
ENSORLG00000022825-9870.270ENSAMXG00000042624SCRT19970.270Astyanax_mexicanus
ENSORLG00000022825-6580.402ENSAMXG00000034158scrt27180.402Astyanax_mexicanus
ENSORLG00000022825-9978.000ENSAMXG00000038085scrt1a9978.000Astyanax_mexicanus
ENSORLG00000022825-5460.123WBGene00000468ces-16158.929Caenorhabditis_elegans
ENSORLG00000022825-8755.720ENSCPBG00000027613SCRT210055.720Chrysemys_picta_bellii
ENSORLG00000022825-9972.333ENSCPBG00000018899SCRT19972.333Chrysemys_picta_bellii
ENSORLG00000022825-10087.129ENSCSEG00000014892-10087.129Cynoglossus_semilaevis
ENSORLG00000022825-10058.716ENSCSEG00000021542scrt29958.716Cynoglossus_semilaevis
ENSORLG00000022825-9972.093ENSCSEG00000008596scrt1b9973.754Cynoglossus_semilaevis
ENSORLG00000022825-10056.928ENSCVAG00000021038scrt29956.928Cyprinodon_variegatus
ENSORLG00000022825-10089.769ENSCVAG00000003190-10089.769Cyprinodon_variegatus
ENSORLG00000022825-9974.086ENSCVAG00000009561scrt1b9974.086Cyprinodon_variegatus
ENSORLG00000022825-9975.000ENSDARG00000040214scrt1b9975.000Danio_rerio
ENSORLG00000022825-9976.412ENSDARG00000100821scrt1a9976.412Danio_rerio
ENSORLG00000022825-9660.897ENSELUG00000023883scrt29559.875Esox_lucius
ENSORLG00000022825-9876.094ENSELUG00000005435scrt1b9876.094Esox_lucius
ENSORLG00000022825-10075.497ENSELUG00000022228scrt1a10075.497Esox_lucius
ENSORLG00000022825-6678.000ENSFALG00000005718SCRT28378.000Ficedula_albicollis
ENSORLG00000022825-10062.215ENSFHEG00000005732scrt29962.215Fundulus_heteroclitus
ENSORLG00000022825-10090.099ENSFHEG00000009794-10090.099Fundulus_heteroclitus
ENSORLG00000022825-9973.754ENSFHEG00000014820scrt1b9973.754Fundulus_heteroclitus
ENSORLG00000022825-9972.667ENSGMOG00000000629scrt1b9972.667Gadus_morhua
ENSORLG00000022825-10053.474ENSGMOG00000019519scrt29853.474Gadus_morhua
ENSORLG00000022825-5594.444ENSGMOG00000013833-5694.444Gadus_morhua
ENSORLG00000022825-9760.204ENSGALG00000028912SCRT29760.667Gallus_gallus
ENSORLG00000022825-10059.062ENSGAFG00000003093scrt29959.062Gambusia_affinis
ENSORLG00000022825-9974.086ENSGAFG00000007636scrt1b9974.086Gambusia_affinis
ENSORLG00000022825-10083.389ENSGAFG00000009650-10083.389Gambusia_affinis
ENSORLG00000022825-9972.575ENSGACG00000008982scrt1b9972.575Gasterosteus_aculeatus
ENSORLG00000022825-10084.158ENSGACG00000004072-10084.158Gasterosteus_aculeatus
ENSORLG00000022825-9660.616ENSGAGG00000020761SCRT29660.616Gopherus_agassizii
ENSORLG00000022825-6871.698ENSGAGG00000020760-8171.698Gopherus_agassizii
ENSORLG00000022825-9874.074ENSGAGG00000011736SCRT19974.074Gopherus_agassizii
ENSORLG00000022825-9761.279ENSHBUG00000012492scrt29661.279Haplochromis_burtoni
ENSORLG00000022825-10089.109ENSHBUG00000019101-10089.109Haplochromis_burtoni
ENSORLG00000022825-9974.419ENSHBUG00000016621scrt1b9974.419Haplochromis_burtoni
ENSORLG00000022825-9973.422ENSHCOG00000016704scrt1b9973.422Hippocampus_comes
ENSORLG00000022825-10071.521ENSHCOG00000016179-10071.521Hippocampus_comes
ENSORLG00000022825-9759.807ENSHCOG00000008116scrt29759.807Hippocampus_comes
ENSORLG00000022825-9868.243ENSIPUG00000005547-9968.243Ictalurus_punctatus
ENSORLG00000022825-9876.174ENSIPUG00000004551scrt1a9976.174Ictalurus_punctatus
ENSORLG00000022825-10058.133ENSKMAG00000018087scrt29958.133Kryptolebias_marmoratus
ENSORLG00000022825-10090.759ENSKMAG00000009489-10090.759Kryptolebias_marmoratus
ENSORLG00000022825-9973.754ENSKMAG00000005484scrt1b9973.754Kryptolebias_marmoratus
ENSORLG00000022825-10057.784ENSLBEG00000015419scrt29957.784Labrus_bergylta
ENSORLG00000022825-10087.043ENSLBEG00000023388-10087.043Labrus_bergylta
ENSORLG00000022825-9973.510ENSLACG00000003588SCRT19973.510Latimeria_chalumnae
ENSORLG00000022825-9975.667ENSLOCG00000007573scrt1b9975.667Lepisosteus_oculatus
ENSORLG00000022825-9753.727ENSLOCG00000002246scrt29755.280Lepisosteus_oculatus
ENSORLG00000022825-9691.111ENSMFAG00000035496SCRT17185.526Macaca_fascicularis
ENSORLG00000022825-10057.958ENSMAMG00000001291scrt29957.357Mastacembelus_armatus
ENSORLG00000022825-9973.090ENSMAMG00000011698scrt1b9974.419Mastacembelus_armatus
ENSORLG00000022825-9761.279ENSMZEG00005026445scrt29661.279Maylandia_zebra
ENSORLG00000022825-10089.109ENSMZEG00005026702-10089.109Maylandia_zebra
ENSORLG00000022825-9974.419ENSMZEG00005005627scrt1b9974.419Maylandia_zebra
ENSORLG00000022825-6479.793ENSMGAG00000016579SCRT28079.793Meleagris_gallopavo
ENSORLG00000022825-9973.090ENSMMOG00000003327scrt1b9973.090Mola_mola
ENSORLG00000022825-10058.182ENSMMOG00000009272scrt29958.485Mola_mola
ENSORLG00000022825-10087.829ENSMMOG00000018345-10087.829Mola_mola
ENSORLG00000022825-9762.245ENSMALG00000013656scrt29662.245Monopterus_albus
ENSORLG00000022825-9973.090ENSMALG00000012704scrt1b9974.419Monopterus_albus
ENSORLG00000022825-5081.208ENSNGAG00000020815Scrt27579.870Nannospalax_galili
ENSORLG00000022825-10060.131ENSNBRG00000007221scrt29960.131Neolamprologus_brichardi
ENSORLG00000022825-10089.439ENSNBRG00000014882-10089.439Neolamprologus_brichardi
ENSORLG00000022825-9972.667ENSNBRG00000013983scrt1b9972.667Neolamprologus_brichardi
ENSORLG00000022825-10057.831ENSONIG00000016758scrt29957.831Oreochromis_niloticus
ENSORLG00000022825-9973.754ENSONIG00000006007scrt1b9973.754Oreochromis_niloticus
ENSORLG00000022825-9757.045ENSONIG00000003152-9657.045Oreochromis_niloticus
ENSORLG00000022825-9785.761ENSONIG00000019809-10085.761Oreochromis_niloticus
ENSORLG00000022825-9758.514ENSORLG00020011478scrt29758.514Oryzias_latipes_hni
ENSORLG00000022825-9973.090ENSORLG00020012967scrt1b9974.086Oryzias_latipes_hni
ENSORLG00000022825-9758.514ENSORLG00015005524scrt29758.514Oryzias_latipes_hsok
ENSORLG00000022825-9973.090ENSORLG00015019165scrt1b9974.086Oryzias_latipes_hsok
ENSORLG00000022825-10098.007ENSORLG00015010104-10098.007Oryzias_latipes_hsok
ENSORLG00000022825-9759.133ENSOMEG00000002661scrt29759.133Oryzias_melastigma
ENSORLG00000022825-9973.090ENSOMEG00000003925scrt1b9974.086Oryzias_melastigma
ENSORLG00000022825-10093.688ENSOMEG00000000286-10093.688Oryzias_melastigma
ENSORLG00000022825-9975.000ENSPKIG00000022303SCRT19975.000Paramormyrops_kingsleyae
ENSORLG00000022825-9976.333ENSPKIG00000020085scrt1a9976.333Paramormyrops_kingsleyae
ENSORLG00000022825-10062.706ENSPMGG00000016561scrt29962.706Periophthalmus_magnuspinnatus
ENSORLG00000022825-10085.479ENSPMGG00000021402-10085.479Periophthalmus_magnuspinnatus
ENSORLG00000022825-9971.333ENSPMGG00000002260scrt1b9971.333Periophthalmus_magnuspinnatus
ENSORLG00000022825-9974.086ENSPFOG00000017719scrt1b9974.086Poecilia_formosa
ENSORLG00000022825-10057.229ENSPFOG00000007738scrt29957.229Poecilia_formosa
ENSORLG00000022825-10090.365ENSPFOG00000005616-10090.365Poecilia_formosa
ENSORLG00000022825-10061.438ENSPLAG00000005765scrt29961.438Poecilia_latipinna
ENSORLG00000022825-10090.365ENSPLAG00000011718-10090.365Poecilia_latipinna
ENSORLG00000022825-9974.086ENSPLAG00000009876scrt1b9974.086Poecilia_latipinna
ENSORLG00000022825-10061.438ENSPMEG00000001538scrt29961.438Poecilia_mexicana
ENSORLG00000022825-9974.086ENSPMEG00000013274scrt1b9974.086Poecilia_mexicana
ENSORLG00000022825-10090.365ENSPMEG00000011706-10090.365Poecilia_mexicana
ENSORLG00000022825-9974.086ENSPREG00000018985scrt1b9974.086Poecilia_reticulata
ENSORLG00000022825-10057.229ENSPREG00000001147scrt29957.229Poecilia_reticulata
ENSORLG00000022825-10090.365ENSPREG00000012166-10090.365Poecilia_reticulata
ENSORLG00000022825-9761.279ENSPNYG00000013109scrt29661.279Pundamilia_nyererei
ENSORLG00000022825-10088.779ENSPNYG00000008865-10088.779Pundamilia_nyererei
ENSORLG00000022825-9974.419ENSPNYG00000017733scrt1b9974.419Pundamilia_nyererei
ENSORLG00000022825-9976.667ENSPNAG00000017415scrt1a9976.667Pygocentrus_nattereri
ENSORLG00000022825-9872.483ENSPNAG00000027880-9972.483Pygocentrus_nattereri
ENSORLG00000022825-9975.667ENSSFOG00015001195SCRT19975.667Scleropages_formosus
ENSORLG00000022825-10072.848ENSSMAG00000019207scrt1b10072.848Scophthalmus_maximus
ENSORLG00000022825-10086.755ENSSMAG00000005122-10086.755Scophthalmus_maximus
ENSORLG00000022825-9974.419ENSSDUG00000007752scrt1b9974.419Seriola_dumerili
ENSORLG00000022825-9859.688ENSSDUG00000001637scrt29659.375Seriola_dumerili
ENSORLG00000022825-10089.769ENSSDUG00000013215-10089.769Seriola_dumerili
ENSORLG00000022825-10089.769ENSSLDG00000016454-10089.769Seriola_lalandi_dorsalis
ENSORLG00000022825-10057.658ENSSLDG00000013565scrt29957.357Seriola_lalandi_dorsalis
ENSORLG00000022825-9974.419ENSSLDG00000017166scrt1b9974.419Seriola_lalandi_dorsalis
ENSORLG00000022825-9759.932ENSSPUG00000018637SCRT29759.932Sphenodon_punctatus
ENSORLG00000022825-10089.439ENSSPAG00000006788-10089.439Stegastes_partitus
ENSORLG00000022825-9974.419ENSSPAG00000002200scrt1b9974.419Stegastes_partitus
ENSORLG00000022825-10060.784ENSSPAG00000014018scrt29960.784Stegastes_partitus
ENSORLG00000022825-6677.889ENSTGUG00000006801SCRT28677.889Taeniopygia_guttata
ENSORLG00000022825-9761.146ENSTRUG00000007620scrt29761.146Takifugu_rubripes
ENSORLG00000022825-10085.479ENSTRUG00000012719-10085.479Takifugu_rubripes
ENSORLG00000022825-8777.863ENSTRUG00000019558-8277.863Takifugu_rubripes
ENSORLG00000022825-9874.161ENSTRUG00000011637scrt1b9974.161Takifugu_rubripes
ENSORLG00000022825-10062.829ENSTNIG00000012473scrt210062.829Tetraodon_nigroviridis
ENSORLG00000022825-9973.754ENSTNIG00000018384scrt1b9973.754Tetraodon_nigroviridis
ENSORLG00000022825-9973.754ENSXCOG00000019675scrt1b9973.754Xiphophorus_couchianus
ENSORLG00000022825-10059.375ENSXCOG00000014367scrt29959.375Xiphophorus_couchianus
ENSORLG00000022825-10082.724ENSXCOG00000019861-10082.724Xiphophorus_couchianus
ENSORLG00000022825-9973.754ENSXMAG00000027885scrt1b9973.754Xiphophorus_maculatus
ENSORLG00000022825-10057.530ENSXMAG00000028567scrt29957.530Xiphophorus_maculatus
ENSORLG00000022825-10089.701ENSXMAG00000015353-10089.701Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us