EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3318 bases
Position: chr4:3867443-3870760
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033608	RVT_1	PF00078.27	1e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039617	-	3318	-	ENSORLP00000033608	1105 (aa)	-	-

Gene Model

Click here to download ENSORLG00000023054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023054	-	60	31.811	ENSORLG00000022764	-	94	30.726
ENSORLG00000023054	-	64	31.359	ENSORLG00000021915	-	98	31.436
ENSORLG00000023054	-	63	30.197	ENSORLG00000028204	-	69	30.197
ENSORLG00000023054	-	60	30.281	ENSORLG00000030445	-	95	30.330
ENSORLG00000023054	-	60	31.370	ENSORLG00000025312	-	93	31.370
ENSORLG00000023054	-	60	32.047	ENSORLG00000024475	-	95	32.047
ENSORLG00000023054	-	52	53.780	ENSORLG00000024294	-	99	53.780
ENSORLG00000023054	-	58	30.655	ENSORLG00000022274	-	80	31.055
ENSORLG00000023054	-	90	55.321	ENSORLG00000025129	-	89	55.487
ENSORLG00000023054	-	57	32.812	ENSORLG00000022342	-	95	32.812
ENSORLG00000023054	-	60	31.696	ENSORLG00000028484	-	95	32.101
ENSORLG00000023054	-	66	30.481	ENSORLG00000026699	-	96	30.481
ENSORLG00000023054	-	61	32.127	ENSORLG00000025495	-	92	32.127
ENSORLG00000023054	-	57	32.412	ENSORLG00000027920	-	96	32.412
ENSORLG00000023054	-	83	30.325	ENSORLG00000030164	-	87	30.664
ENSORLG00000023054	-	60	31.548	ENSORLG00000022724	-	95	31.953
ENSORLG00000023054	-	60	31.811	ENSORLG00000028549	-	95	31.811
ENSORLG00000023054	-	61	32.179	ENSORLG00000028326	-	87	32.179
ENSORLG00000023054	-	52	30.268	ENSORLG00000023890	-	97	30.268
ENSORLG00000023054	-	90	55.422	ENSORLG00000024201	-	89	55.590
ENSORLG00000023054	-	82	31.297	ENSORLG00000025871	-	75	31.297
ENSORLG00000023054	-	56	31.761	ENSORLG00000025964	-	95	31.761
ENSORLG00000023054	-	60	31.899	ENSORLG00000029236	-	95	31.899
ENSORLG00000023054	-	60	32.101	ENSORLG00000023505	-	90	32.101
ENSORLG00000023054	-	64	30.265	ENSORLG00000030233	-	93	30.652
ENSORLG00000023054	-	54	30.880	ENSORLG00000022026	-	93	31.118
ENSORLG00000023054	-	52	99.301	ENSORLG00000025054	-	100	99.301
ENSORLG00000023054	-	60	31.696	ENSORLG00000029550	-	92	32.101
ENSORLG00000023054	-	51	30.940	ENSORLG00000022703	-	90	31.111
ENSORLG00000023054	-	63	30.465	ENSORLG00000025670	-	92	30.856
ENSORLG00000023054	-	72	30.361	ENSORLG00000026492	-	98	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023054	-	61	57.016	ENSACLG00000006988	-	99	57.016	Astatotilapia_calliptera
ENSORLG00000023054	-	52	57.958	ENSACLG00000016231	-	99	57.958	Astatotilapia_calliptera
ENSORLG00000023054	-	68	56.390	ENSACLG00000009813	-	86	56.150	Astatotilapia_calliptera
ENSORLG00000023054	-	50	31.514	ENSACLG00000020009	-	95	31.514	Astatotilapia_calliptera
ENSORLG00000023054	-	72	44.431	ENSAMXG00000029265	-	85	44.431	Astyanax_mexicanus
ENSORLG00000023054	-	62	31.683	ENSLBEG00000015802	-	96	31.683	Labrus_bergylta
ENSORLG00000023054	-	85	37.277	ENSORLG00020003695	-	99	37.277	Oryzias_latipes_hni
ENSORLG00000023054	-	70	56.516	ENSORLG00020002955	-	99	56.516	Oryzias_latipes_hni
ENSORLG00000023054	-	65	55.278	ENSORLG00020013338	-	85	55.508	Oryzias_latipes_hni
ENSORLG00000023054	-	52	40.696	ENSORLG00020009687	-	99	40.696	Oryzias_latipes_hni
ENSORLG00000023054	-	58	98.585	ENSORLG00015005330	-	100	98.585	Oryzias_latipes_hsok
ENSORLG00000023054	-	59	55.692	ENSORLG00015020629	-	99	55.692	Oryzias_latipes_hsok
ENSORLG00000023054	-	89	55.589	ENSOMEG00000015999	-	89	55.396	Oryzias_melastigma
ENSORLG00000023054	-	82	52.418	ENSOMEG00000007525	-	95	52.691	Oryzias_melastigma