EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023072 (Gene tree)
Gene ID: 101155175
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 668
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2180 bases
Position: chr16:1065721-1067900
Accession: 101155175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043977	zf-C2H2	PF00096.26	4.2e-29	1	5
ENSORLP00000043977	zf-C2H2	PF00096.26	4.2e-29	2	5
ENSORLP00000043977	zf-C2H2	PF00096.26	4.2e-29	3	5
ENSORLP00000043977	zf-C2H2	PF00096.26	4.2e-29	4	5
ENSORLP00000043977	zf-C2H2	PF00096.26	4.2e-29	5	5
ENSORLP00000043977	zf-met	PF12874.7	1.3e-08	1	1
ENSORLP00000043977	zf-C2H2_jaz	PF12171.8	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028446	-	1251	XM_004086647	ENSORLP00000043977	416 (aa)	XP_004086695	UPI0002A4C8AB

Gene Model

Click here to download ENSORLG00000023072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023072	-	86	43.902	ENSORLG00000024399	-	91	35.714
ENSORLG00000023072	-	91	31.013	ENSORLG00000025717	-	84	33.333
ENSORLG00000023072	-	85	32.955	ENSORLG00000023497	-	62	33.333
ENSORLG00000023072	-	85	35.052	ENSORLG00000027186	-	83	35.714
ENSORLG00000023072	-	86	35.135	ENSORLG00000024652	-	95	33.735
ENSORLG00000023072	-	85	33.962	ENSORLG00000028323	-	89	34.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023072	-	98	60.096	ENSAMXG00000038507	-	98	60.096	Astyanax_mexicanus
ENSORLG00000023072	-	83	36.752	ENSCSEG00000012798	-	98	36.963	Cynoglossus_semilaevis
ENSORLG00000023072	-	97	62.302	ENSELUG00000020907	-	98	58.980	Esox_lucius
ENSORLG00000023072	-	100	41.412	ENSELUG00000009258	-	100	44.418	Esox_lucius
ENSORLG00000023072	-	99	77.427	ENSFHEG00000005807	-	98	78.641	Fundulus_heteroclitus
ENSORLG00000023072	-	99	79.469	ENSGAFG00000003348	-	98	79.952	Gambusia_affinis
ENSORLG00000023072	-	98	60.341	ENSIPUG00000002513	-	98	60.341	Ictalurus_punctatus
ENSORLG00000023072	-	100	80.529	ENSKMAG00000014028	-	93	80.048	Kryptolebias_marmoratus
ENSORLG00000023072	-	99	78.398	ENSMMOG00000009859	-	99	78.398	Mola_mola
ENSORLG00000023072	-	100	98.798	ENSORLG00020002684	-	100	98.798	Oryzias_latipes_hni
ENSORLG00000023072	-	100	98.558	ENSORLG00015018897	-	100	98.558	Oryzias_latipes_hsok
ENSORLG00000023072	-	100	92.788	ENSOMEG00000010520	-	95	92.788	Oryzias_melastigma
ENSORLG00000023072	-	99	78.986	ENSPLAG00000005849	-	98	79.952	Poecilia_latipinna
ENSORLG00000023072	-	99	78.261	ENSPMEG00000020957	-	98	79.952	Poecilia_mexicana
ENSORLG00000023072	-	99	78.554	ENSPREG00000007939	-	98	79.518	Poecilia_reticulata
ENSORLG00000023072	-	98	61.594	ENSPNAG00000003839	-	98	62.439	Pygocentrus_nattereri
ENSORLG00000023072	-	98	59.903	ENSSFOG00015019679	-	98	61.928	Scleropages_formosus
ENSORLG00000023072	-	99	78.125	ENSXCOG00000015432	-	98	79.567	Xiphophorus_couchianus
ENSORLG00000023072	-	99	78.125	ENSXMAG00000029995	-	88	79.567	Xiphophorus_maculatus