EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023176 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4982 bases
Position: chr10:4515118-4520099
Accession: 101168026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040188	RRM_1	PF00076.22	1.2e-33	1	2
ENSORLP00000040188	RRM_1	PF00076.22	1.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036181	-	912	XM_004086553	ENSORLP00000040188	303 (aa)	XP_004086601	-

Gene Model

Click here to download ENSORLG00000023176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023176	-	62	37.681	ENSORLG00000012435	elavl1a	76	37.681
ENSORLG00000023176	-	65	67.513	ENSORLG00000025015	-	66	67.513
ENSORLG00000023176	-	97	94.881	ENSORLG00000024157	-	99	94.881
ENSORLG00000023176	-	56	39.080	ENSORLG00000001833	hnrnpd	80	35.260
ENSORLG00000023176	-	58	35.556	ENSORLG00000005188	tardbpl	54	35.556
ENSORLG00000023176	-	60	34.351	ENSORLG00000003593	tardbp	50	34.351
ENSORLG00000023176	-	67	69.458	ENSORLG00000029240	-	99	71.066
ENSORLG00000023176	-	59	49.162	ENSORLG00000017561	hnrnpa3	94	39.748
ENSORLG00000023176	-	56	39.773	ENSORLG00000005327	hnrnpaba	53	39.773
ENSORLG00000023176	-	54	32.500	ENSORLG00000000087	-	83	32.500
ENSORLG00000023176	-	53	39.130	ENSORLG00000028487	elavl4	53	39.130
ENSORLG00000023176	-	61	37.037	ENSORLG00000029593	MSI1	58	36.559
ENSORLG00000023176	-	68	98.324	ENSORLG00000027074	-	87	98.324
ENSORLG00000023176	-	71	64.352	ENSORLG00000030284	-	70	69.466
ENSORLG00000023176	-	69	40.909	ENSORLG00000026044	hnrnpabb	57	40.909
ENSORLG00000023176	-	68	36.957	ENSORLG00000008278	dazap1	51	36.957
ENSORLG00000023176	-	58	53.448	ENSORLG00000008001	-	54	53.448
ENSORLG00000023176	-	68	35.802	ENSORLG00000009671	msi2a	56	37.143
ENSORLG00000023176	-	99	91.000	ENSORLG00000023542	-	99	91.000
ENSORLG00000023176	-	65	67.513	ENSORLG00000025332	-	66	67.513
ENSORLG00000023176	-	61	33.684	ENSORLG00000019978	-	56	33.684
ENSORLG00000023176	-	68	96.471	ENSORLG00000026571	-	90	96.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023176	-	58	62.428	ENSAOCG00000015914	-	65	61.236	Amphiprion_ocellaris
ENSORLG00000023176	-	59	73.718	ENSAOCG00000015951	-	95	73.718	Amphiprion_ocellaris
ENSORLG00000023176	-	59	62.428	ENSAPEG00000002224	-	75	61.236	Amphiprion_percula
ENSORLG00000023176	-	59	73.718	ENSAPEG00000002274	-	95	73.718	Amphiprion_percula
ENSORLG00000023176	-	58	63.006	ENSACLG00000008978	-	83	61.798	Astatotilapia_calliptera
ENSORLG00000023176	-	58	59.538	ENSCVAG00000008324	-	78	58.427	Cyprinodon_variegatus
ENSORLG00000023176	-	58	44.186	FBgn0004237	Hrb87F	84	37.695	Drosophila_melanogaster
ENSORLG00000023176	-	58	45.665	FBgn0001215	Hrb98DE	52	45.665	Drosophila_melanogaster
ENSORLG00000023176	-	57	37.086	ENSEBUG00000010003	-	80	37.086	Eptatretus_burgeri
ENSORLG00000023176	-	59	61.635	ENSELUG00000014407	-	96	61.635	Esox_lucius
ENSORLG00000023176	-	58	63.006	ENSHBUG00000023867	-	83	61.798	Haplochromis_burtoni
ENSORLG00000023176	-	57	58.382	ENSHCOG00000007180	-	76	57.627	Hippocampus_comes
ENSORLG00000023176	-	60	56.970	ENSLBEG00000006362	-	78	57.764	Labrus_bergylta
ENSORLG00000023176	-	55	61.261	ENSLOCG00000012121	-	60	61.261	Lepisosteus_oculatus
ENSORLG00000023176	-	59	59.322	ENSMAMG00000017728	-	69	58.242	Mastacembelus_armatus
ENSORLG00000023176	-	58	63.006	ENSMZEG00005001063	-	81	61.798	Maylandia_zebra
ENSORLG00000023176	-	60	68.944	ENSMMOG00000004242	-	96	70.064	Mola_mola
ENSORLG00000023176	-	73	42.534	ENSMEUG00000003051	-	91	36.721	Notamacropus_eugenii
ENSORLG00000023176	-	61	58.960	ENSORLG00020007171	-	96	58.960	Oryzias_latipes_hni
ENSORLG00000023176	-	68	97.436	ENSORLG00020007084	-	84	97.436	Oryzias_latipes_hni
ENSORLG00000023176	-	96	82.131	ENSORLG00020006029	-	93	87.629	Oryzias_latipes_hni
ENSORLG00000023176	-	99	50.355	ENSOMEG00000012368	-	84	64.171	Oryzias_melastigma
ENSORLG00000023176	-	98	41.214	ENSOMEG00000006327	-	96	43.478	Oryzias_melastigma
ENSORLG00000023176	-	96	60.386	ENSOMEG00000002509	-	88	61.111	Oryzias_melastigma
ENSORLG00000023176	-	98	65.000	ENSOMEG00000002000	-	87	64.641	Oryzias_melastigma
ENSORLG00000023176	-	99	56.957	ENSOMEG00000006903	-	87	59.048	Oryzias_melastigma
ENSORLG00000023176	-	96	66.667	ENSOMEG00000021030	-	85	66.286	Oryzias_melastigma
ENSORLG00000023176	-	73	61.290	ENSOMEG00000002084	-	72	64.762	Oryzias_melastigma
ENSORLG00000023176	-	99	54.167	ENSOMEG00000023475	-	87	61.244	Oryzias_melastigma
ENSORLG00000023176	-	58	65.806	ENSOMEG00000009566	-	80	65.806	Oryzias_melastigma
ENSORLG00000023176	-	58	59.538	ENSPREG00000010603	-	60	58.427	Poecilia_reticulata
ENSORLG00000023176	-	58	63.006	ENSPNYG00000020763	-	83	61.798	Pundamilia_nyererei
ENSORLG00000023176	-	59	62.025	ENSPNAG00000018051	-	80	62.025	Pygocentrus_nattereri
ENSORLG00000023176	-	68	56.069	ENSSHAG00000015609	-	80	56.395	Sarcophilus_harrisii
ENSORLG00000023176	-	59	60.870	ENSSDUG00000002394	-	86	60.870	Seriola_dumerili
ENSORLG00000023176	-	62	70.440	ENSSLDG00000024685	-	89	71.338	Seriola_lalandi_dorsalis