EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023270 (Gene tree)
Gene ID: 101167961
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 6822 bases
Position: chr8:6896002-6902823
Accession: 101167961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000030308	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030860	-	3380	XM_004071313	ENSORLP00000030308	180 (aa)	XP_004071361	UPI0000EA0D81

Gene Model

Click here to download ENSORLG00000023270's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023270	-	98	45.455	ENSORLG00000002960	arl5c	100	45.732
ENSORLG00000023270	-	84	35.443	ENSORLG00000018307	-	80	38.333
ENSORLG00000023270	-	92	59.639	ENSORLG00000008909	arl1	98	59.639
ENSORLG00000023270	-	63	30.081	ENSORLG00000028104	rab1ab	58	30.081
ENSORLG00000023270	-	92	46.386	ENSORLG00000010952	arl3	95	46.386
ENSORLG00000023270	-	83	32.911	ENSORLG00000001879	arl15a	77	32.911
ENSORLG00000023270	-	88	48.780	ENSORLG00000029448	arl4aa	85	48.780
ENSORLG00000023270	-	100	92.818	ENSORLG00000025025	arf3b	100	92.818
ENSORLG00000023270	-	93	45.509	ENSORLG00000005005	arl3l2	89	45.509
ENSORLG00000023270	-	91	46.951	ENSORLG00000005571	arl2	89	46.951
ENSORLG00000023270	-	94	34.615	ENSORLG00000010647	arfrp1	89	34.615
ENSORLG00000023270	-	94	30.387	ENSORLG00000009132	-	82	30.387
ENSORLG00000023270	-	96	47.191	ENSORLG00000013843	arl4cb	91	47.191
ENSORLG00000023270	-	97	50.575	ENSORLG00000009664	arl5a	97	50.575
ENSORLG00000023270	-	98	92.697	ENSORLG00000017594	-	98	93.023
ENSORLG00000023270	-	96	30.460	ENSORLG00000028909	arl8a	93	30.460
ENSORLG00000023270	-	90	32.164	ENSORLG00000006350	arl13b	68	32.164
ENSORLG00000023270	-	90	45.679	ENSORLG00000007235	-	86	45.679
ENSORLG00000023270	-	100	93.923	ENSORLG00000029190	arf2b	87	93.923
ENSORLG00000023270	-	86	45.161	ENSORLG00000018486	arl11	93	45.161
ENSORLG00000023270	-	96	31.609	ENSORLG00000027941	arl8ba	94	31.609
ENSORLG00000023270	-	96	50.000	ENSORLG00000010847	arl8	96	50.000
ENSORLG00000023270	-	100	92.818	ENSORLG00000007661	-	100	92.818
ENSORLG00000023270	-	88	46.988	ENSORLG00000026726	-	87	46.988
ENSORLG00000023270	-	96	32.759	ENSORLG00000012782	arl8bb	94	32.759
ENSORLG00000023270	-	87	41.615	ENSORLG00000027330	arl14	87	41.615
ENSORLG00000023270	-	91	41.916	ENSORLG00000015588	-	80	41.916
ENSORLG00000023270	-	100	42.935	ENSORLG00000005063	ARL6	99	42.935
ENSORLG00000023270	-	63	30.081	ENSORLG00000021846	-	58	30.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023270	-	100	96.667	ENSACIG00000012192	-	100	96.667	Amphilophus_citrinellus
ENSORLG00000023270	-	84	96.689	ENSAOCG00000001275	-	88	96.689	Amphiprion_ocellaris
ENSORLG00000023270	-	100	96.667	ENSAPEG00000016909	-	100	96.667	Amphiprion_percula
ENSORLG00000023270	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSORLG00000023270	-	100	95.556	ENSACLG00000004123	-	100	95.556	Astatotilapia_calliptera
ENSORLG00000023270	-	100	93.923	ENSAMXG00000019845	arf1	100	93.923	Astyanax_mexicanus
ENSORLG00000023270	-	100	97.222	ENSCVAG00000013374	-	100	97.222	Cyprinodon_variegatus
ENSORLG00000023270	-	100	93.923	ENSDARG00000009484	arf1	100	93.923	Danio_rerio
ENSORLG00000023270	-	100	94.475	ENSELUG00000022533	arf1	79	94.475	Esox_lucius
ENSORLG00000023270	-	100	97.778	ENSFHEG00000005859	-	100	97.778	Fundulus_heteroclitus
ENSORLG00000023270	-	96	88.439	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSORLG00000023270	-	100	97.222	ENSGAFG00000018151	-	100	97.222	Gambusia_affinis
ENSORLG00000023270	-	100	85.556	ENSGACG00000014195	-	97	85.556	Gasterosteus_aculeatus
ENSORLG00000023270	-	100	95.556	ENSHBUG00000002636	-	100	95.556	Haplochromis_burtoni
ENSORLG00000023270	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSORLG00000023270	-	100	96.111	ENSKMAG00000018315	-	100	96.111	Kryptolebias_marmoratus
ENSORLG00000023270	-	99	89.326	ENSLBEG00000023263	-	98	89.326	Labrus_bergylta
ENSORLG00000023270	-	99	88.202	ENSLBEG00000001998	arf1	99	88.202	Labrus_bergylta
ENSORLG00000023270	-	100	97.778	ENSMAMG00000001553	-	100	97.778	Mastacembelus_armatus
ENSORLG00000023270	-	100	95.556	ENSMZEG00005022594	-	100	95.556	Maylandia_zebra
ENSORLG00000023270	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSORLG00000023270	-	100	95.556	ENSNBRG00000016455	-	100	95.556	Neolamprologus_brichardi
ENSORLG00000023270	-	100	95.556	ENSONIG00000001286	-	100	95.556	Oreochromis_niloticus
ENSORLG00000023270	-	100	99.444	ENSORLG00020006712	-	100	99.444	Oryzias_latipes_hni
ENSORLG00000023270	-	100	100.000	ENSORLG00015019836	-	100	100.000	Oryzias_latipes_hsok
ENSORLG00000023270	-	100	100.000	ENSOMEG00000023784	-	100	100.000	Oryzias_melastigma
ENSORLG00000023270	-	100	89.503	ENSPMGG00000014174	arf1	100	89.503	Periophthalmus_magnuspinnatus
ENSORLG00000023270	-	100	93.333	ENSPMAG00000002035	arf1	100	93.333	Petromyzon_marinus
ENSORLG00000023270	-	100	97.222	ENSPFOG00000014787	-	100	97.222	Poecilia_formosa
ENSORLG00000023270	-	100	97.222	ENSPLAG00000001041	-	100	97.222	Poecilia_latipinna
ENSORLG00000023270	-	100	97.222	ENSPMEG00000024077	-	100	97.222	Poecilia_mexicana
ENSORLG00000023270	-	100	97.222	ENSPREG00000009009	-	100	97.222	Poecilia_reticulata
ENSORLG00000023270	-	100	95.556	ENSPNYG00000009472	-	100	95.556	Pundamilia_nyererei
ENSORLG00000023270	-	94	96.450	ENSPNAG00000000098	arf1	93	96.450	Pygocentrus_nattereri
ENSORLG00000023270	-	99	77.654	YDL137W	-	99	77.654	Saccharomyces_cerevisiae
ENSORLG00000023270	-	99	78.333	YDL192W	-	99	78.333	Saccharomyces_cerevisiae
ENSORLG00000023270	-	100	90.556	ENSSMAG00000006125	-	100	90.556	Scophthalmus_maximus
ENSORLG00000023270	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSORLG00000023270	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSORLG00000023270	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSORLG00000023270	-	100	96.111	ENSTRUG00000019870	-	100	96.111	Takifugu_rubripes
ENSORLG00000023270	-	100	94.444	ENSTNIG00000011685	-	100	94.444	Tetraodon_nigroviridis
ENSORLG00000023270	-	100	97.222	ENSXCOG00000016687	-	98	97.222	Xiphophorus_couchianus
ENSORLG00000023270	-	100	97.222	ENSXMAG00000009193	-	100	97.222	Xiphophorus_maculatus