EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSORLG00000023325 (Gene tree)
Gene ID
101164538
Gene Symbol
-
Alias
-
Full Name
matrin-3
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
17701 bases
Position
chr10:3432633-3450333
Accession
101164538
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000025454RRM_1PF00076.223.2e-1011
ENSORLP00000030623RRM_1PF00076.229.4e-1011
ENSORLP00000044555RRM_1PF00076.229.8e-1011
ENSORLP00000041392RRM_1PF00076.223.9e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000034376-3537-ENSORLP000000445551178 (aa)--
ENSORLT00000042668-3498-ENSORLP000000306231165 (aa)--
ENSORLT00000025455-2580-ENSORLP00000025454859 (aa)-H2N1Y9
ENSORLT00000042616-3254XM_023959520ENSORLP000000413921066 (aa)XP_023815288-
Gene Model
Click here to download ENSORLG00000023325's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023325's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000023325-7656.716ENSAPEG00000003827-9144.618Amphiprion_percula
ENSORLG00000023325-9250.528ENSATEG00000018501-9451.070Anabas_testudineus
ENSORLG00000023325-5151.667ENSAMXG00000010682-6951.724Astyanax_mexicanus
ENSORLG00000023325-5146.751ENSCSEG00000012656-8363.333Cynoglossus_semilaevis
ENSORLG00000023325-9575.806ENSCVAG00000005349-8877.966Cyprinodon_variegatus
ENSORLG00000023325-9130.507ENSELUG00000022000-6130.043Esox_lucius
ENSORLG00000023325-10047.753ENSKMAG00000007525-8860.215Kryptolebias_marmoratus
ENSORLG00000023325-6331.884ENSONIG00000004400-9546.531Oreochromis_niloticus
ENSORLG00000023325-10096.154ENSORLG00020009274-10096.154Oryzias_latipes_hni
ENSORLG00000023325-9392.456ENSORLG00015018491-9395.115Oryzias_latipes_hsok
ENSORLG00000023325-10067.614ENSOMEG00000022255-10072.052Oryzias_melastigma

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