EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000023473 (Gene tree)
Gene ID: 101156418
Gene Symbol: rnaseh2c
Alias: -
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7332 bases
Position: chr10:12027892-12035223
Accession: 101156418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042824	RNase_H2_suC	PF08615.11	4.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046611	-	5587	XM_004073155	ENSORLP00000042824	136 (aa)	XP_004073203	UPI0002A48327

Gene Model

Click here to download ENSORLG00000023473's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023473	rnaseh2c	100	80.147	ENSAPOG00000012901	rnaseh2c	99	80.147	Acanthochromis_polyacanthus
ENSORLG00000023473	rnaseh2c	100	78.676	ENSACIG00000022433	rnaseh2c	100	78.676	Amphilophus_citrinellus
ENSORLG00000023473	rnaseh2c	100	79.412	ENSAOCG00000016855	rnaseh2c	100	79.412	Amphiprion_ocellaris
ENSORLG00000023473	rnaseh2c	100	80.147	ENSAPEG00000009850	rnaseh2c	100	80.147	Amphiprion_percula
ENSORLG00000023473	rnaseh2c	100	77.941	ENSATEG00000014395	rnaseh2c	100	77.941	Anabas_testudineus
ENSORLG00000023473	rnaseh2c	100	76.471	ENSACLG00000016950	rnaseh2c	100	76.471	Astatotilapia_calliptera
ENSORLG00000023473	rnaseh2c	99	61.481	ENSAMXG00000001210	rnaseh2c	100	61.481	Astyanax_mexicanus
ENSORLG00000023473	rnaseh2c	99	49.254	ENSCPBG00000023408	-	96	49.254	Chrysemys_picta_bellii
ENSORLG00000023473	rnaseh2c	100	74.265	ENSCSEG00000005808	rnaseh2c	99	74.265	Cynoglossus_semilaevis
ENSORLG00000023473	rnaseh2c	100	75.000	ENSCVAG00000006337	rnaseh2c	100	75.000	Cyprinodon_variegatus
ENSORLG00000023473	rnaseh2c	100	61.765	ENSDARG00000089637	rnaseh2c	99	61.765	Danio_rerio
ENSORLG00000023473	rnaseh2c	78	50.000	ENSEBUG00000014939	rnaseh2c	69	50.000	Eptatretus_burgeri
ENSORLG00000023473	rnaseh2c	99	65.185	ENSELUG00000007345	rnaseh2c	99	65.185	Esox_lucius
ENSORLG00000023473	rnaseh2c	96	74.615	ENSFHEG00000002419	rnaseh2c	95	74.615	Fundulus_heteroclitus
ENSORLG00000023473	rnaseh2c	65	70.787	ENSGMOG00000008727	rnaseh2c	99	70.787	Gadus_morhua
ENSORLG00000023473	rnaseh2c	100	73.529	ENSGAFG00000016755	rnaseh2c	83	73.529	Gambusia_affinis
ENSORLG00000023473	rnaseh2c	99	49.254	ENSGAGG00000008193	-	96	49.254	Gopherus_agassizii
ENSORLG00000023473	rnaseh2c	100	76.471	ENSHBUG00000012806	rnaseh2c	100	76.471	Haplochromis_burtoni
ENSORLG00000023473	rnaseh2c	100	72.059	ENSHCOG00000007177	rnaseh2c	100	72.059	Hippocampus_comes
ENSORLG00000023473	rnaseh2c	100	58.824	ENSIPUG00000018044	rnaseh2c	100	58.824	Ictalurus_punctatus
ENSORLG00000023473	rnaseh2c	100	76.471	ENSKMAG00000004184	rnaseh2c	100	76.471	Kryptolebias_marmoratus
ENSORLG00000023473	rnaseh2c	100	75.182	ENSLBEG00000005742	rnaseh2c	100	75.182	Labrus_bergylta
ENSORLG00000023473	rnaseh2c	95	55.039	ENSLACG00000010120	-	92	55.725	Latimeria_chalumnae
ENSORLG00000023473	rnaseh2c	100	76.471	ENSMAMG00000021610	rnaseh2c	100	76.471	Mastacembelus_armatus
ENSORLG00000023473	rnaseh2c	100	77.206	ENSMZEG00005004796	rnaseh2c	100	77.206	Maylandia_zebra
ENSORLG00000023473	rnaseh2c	100	75.000	ENSMMOG00000002869	rnaseh2c	97	78.226	Mola_mola
ENSORLG00000023473	rnaseh2c	100	77.372	ENSMALG00000012198	rnaseh2c	100	77.372	Monopterus_albus
ENSORLG00000023473	rnaseh2c	100	76.471	ENSNBRG00000001462	rnaseh2c	100	76.471	Neolamprologus_brichardi
ENSORLG00000023473	rnaseh2c	100	75.735	ENSONIG00000005338	rnaseh2c	99	75.735	Oreochromis_niloticus
ENSORLG00000023473	rnaseh2c	100	97.794	ENSORLG00020019053	rnaseh2c	91	97.794	Oryzias_latipes_hni
ENSORLG00000023473	rnaseh2c	100	97.794	ENSORLG00015017067	rnaseh2c	91	97.794	Oryzias_latipes_hsok
ENSORLG00000023473	rnaseh2c	100	91.912	ENSOMEG00000018607	rnaseh2c	100	91.912	Oryzias_melastigma
ENSORLG00000023473	rnaseh2c	100	58.088	ENSPKIG00000019331	rnaseh2c	100	58.088	Paramormyrops_kingsleyae
ENSORLG00000023473	rnaseh2c	100	72.794	ENSPFOG00000009415	rnaseh2c	100	72.794	Poecilia_formosa
ENSORLG00000023473	rnaseh2c	100	72.059	ENSPLAG00000023330	rnaseh2c	100	72.059	Poecilia_latipinna
ENSORLG00000023473	rnaseh2c	100	72.794	ENSPMEG00000003696	rnaseh2c	100	72.794	Poecilia_mexicana
ENSORLG00000023473	rnaseh2c	100	68.027	ENSPREG00000015384	rnaseh2c	73	68.027	Poecilia_reticulata
ENSORLG00000023473	rnaseh2c	100	76.471	ENSPNYG00000014766	rnaseh2c	100	76.471	Pundamilia_nyererei
ENSORLG00000023473	rnaseh2c	99	62.222	ENSPNAG00000019111	rnaseh2c	99	62.222	Pygocentrus_nattereri
ENSORLG00000023473	rnaseh2c	99	64.444	ENSSFOG00015005760	rnaseh2c	99	64.444	Scleropages_formosus
ENSORLG00000023473	rnaseh2c	100	78.676	ENSSMAG00000017738	rnaseh2c	100	78.676	Scophthalmus_maximus
ENSORLG00000023473	rnaseh2c	100	77.941	ENSSDUG00000017285	rnaseh2c	100	77.941	Seriola_dumerili
ENSORLG00000023473	rnaseh2c	100	77.941	ENSSLDG00000016030	rnaseh2c	100	77.941	Seriola_lalandi_dorsalis
ENSORLG00000023473	rnaseh2c	96	48.872	ENSSPUG00000000842	-	88	48.507	Sphenodon_punctatus
ENSORLG00000023473	rnaseh2c	100	75.735	ENSSPAG00000007536	rnaseh2c	100	75.735	Stegastes_partitus
ENSORLG00000023473	rnaseh2c	100	69.853	ENSTRUG00000021845	rnaseh2c	100	69.853	Takifugu_rubripes
ENSORLG00000023473	rnaseh2c	100	72.059	ENSTNIG00000000431	rnaseh2c	100	72.059	Tetraodon_nigroviridis
ENSORLG00000023473	rnaseh2c	84	50.877	ENSXETG00000032466	-	83	50.877	Xenopus_tropicalis
ENSORLG00000023473	rnaseh2c	100	74.265	ENSXCOG00000001611	rnaseh2c	100	74.265	Xiphophorus_couchianus
ENSORLG00000023473	rnaseh2c	100	75.000	ENSXMAG00000003147	rnaseh2c	83	75.000	Xiphophorus_maculatus