EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023496 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1985 bases
Position: chr20:4711283-4713267
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036768	zf-CCHC	PF00098.23	0.00052	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036789	-	1041	-	ENSORLP00000036768	346 (aa)	-	-

Gene Model

Click here to download ENSORLG00000023496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023496	-	95	97.866	ENSORLG00000029602	-	97	94.253
ENSORLG00000023496	-	96	64.412	ENSORLG00000027391	-	89	64.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023496	-	99	33.616	ENSAMXG00000042165	-	93	33.616	Astyanax_mexicanus
ENSORLG00000023496	-	68	34.894	ENSAMXG00000036244	-	80	32.226	Astyanax_mexicanus
ENSORLG00000023496	-	95	30.330	ENSFHEG00000001818	-	81	30.330	Fundulus_heteroclitus
ENSORLG00000023496	-	92	32.812	ENSHBUG00000010718	-	95	32.812	Haplochromis_burtoni
ENSORLG00000023496	-	90	35.312	ENSHCOG00000001473	-	89	35.312	Hippocampus_comes
ENSORLG00000023496	-	56	35.204	ENSLOCG00000010704	-	93	35.204	Lepisosteus_oculatus
ENSORLG00000023496	-	85	30.263	ENSMAMG00000007057	-	89	30.263	Mastacembelus_armatus
ENSORLG00000023496	-	68	37.288	ENSMZEG00005021915	-	71	37.288	Maylandia_zebra
ENSORLG00000023496	-	92	33.438	ENSMZEG00005007727	-	95	33.438	Maylandia_zebra
ENSORLG00000023496	-	92	82.919	ENSORLG00020001780	-	88	82.919	Oryzias_latipes_hni
ENSORLG00000023496	-	98	69.883	ENSORLG00020020969	-	86	69.883	Oryzias_latipes_hni
ENSORLG00000023496	-	98	77.581	ENSORLG00020007518	-	95	77.581	Oryzias_latipes_hni
ENSORLG00000023496	-	91	34.783	ENSPREG00000001860	-	86	34.783	Poecilia_reticulata
ENSORLG00000023496	-	69	34.310	ENSPNAG00000011784	-	78	34.310	Pygocentrus_nattereri
ENSORLG00000023496	-	91	34.161	ENSPNAG00000026690	-	78	34.161	Pygocentrus_nattereri
ENSORLG00000023496	-	69	33.054	ENSPNAG00000001406	-	70	33.054	Pygocentrus_nattereri