EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5788 bases
Position: chr10:6518911-6524698
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043841	RRM_1	PF00076.22	4.9e-32	1	2
ENSORLP00000043841	RRM_1	PF00076.22	4.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039941	-	876	-	ENSORLP00000043841	291 (aa)	-	-

Gene Model

Click here to download ENSORLG00000023542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023542	-	64	32.275	ENSORLG00000019978	-	57	32.447
ENSORLG00000023542	-	70	97.740	ENSORLG00000027074	-	87	97.740
ENSORLG00000023542	-	59	33.333	ENSORLG00000005188	tardbpl	65	31.818
ENSORLG00000023542	-	58	41.333	ENSORLG00000001833	hnrnpd	80	33.721
ENSORLG00000023542	-	67	68.041	ENSORLG00000025332	-	66	67.005
ENSORLG00000023542	-	63	35.106	ENSORLG00000029593	MSI1	58	35.106
ENSORLG00000023542	-	56	34.722	ENSORLG00000000087	-	81	34.722
ENSORLG00000023542	-	71	39.535	ENSORLG00000026044	hnrnpabb	56	39.535
ENSORLG00000023542	-	69	70.000	ENSORLG00000029240	-	99	70.558
ENSORLG00000023542	-	50	40.278	ENSORLG00000015433	cirbpa	52	38.095
ENSORLG00000023542	-	99	91.000	ENSORLG00000023176	-	99	91.000
ENSORLG00000023542	-	67	68.041	ENSORLG00000025015	-	66	67.005
ENSORLG00000023542	-	61	50.568	ENSORLG00000008001	-	54	50.568
ENSORLG00000023542	-	67	69.697	ENSORLG00000030284	-	70	70.229
ENSORLG00000023542	-	70	96.429	ENSORLG00000026571	-	90	96.429
ENSORLG00000023542	-	60	37.975	ENSORLG00000009671	msi2a	56	37.975
ENSORLG00000023542	-	61	33.588	ENSORLG00000003593	tardbp	50	33.588
ENSORLG00000023542	-	99	94.138	ENSORLG00000024157	-	99	94.138
ENSORLG00000023542	-	62	47.514	ENSORLG00000017561	hnrnpa3	94	38.782
ENSORLG00000023542	-	58	38.636	ENSORLG00000005327	hnrnpaba	53	38.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023542	-	61	62.069	ENSAOCG00000015914	-	65	60.894	Amphiprion_ocellaris
ENSORLG00000023542	-	62	73.248	ENSAOCG00000015951	-	95	73.248	Amphiprion_ocellaris
ENSORLG00000023542	-	62	62.069	ENSAPEG00000002224	-	76	60.894	Amphiprion_percula
ENSORLG00000023542	-	62	73.248	ENSAPEG00000002274	-	95	73.248	Amphiprion_percula
ENSORLG00000023542	-	61	62.644	ENSACLG00000008978	-	83	61.453	Astatotilapia_calliptera
ENSORLG00000023542	-	61	59.195	ENSCVAG00000008324	-	78	58.101	Cyprinodon_variegatus
ENSORLG00000023542	-	61	43.678	FBgn0004237	Hrb87F	84	36.503	Drosophila_melanogaster
ENSORLG00000023542	-	60	44.767	FBgn0001215	Hrb98DE	73	37.302	Drosophila_melanogaster
ENSORLG00000023542	-	58	37.805	ENSEBUG00000010003	-	79	38.000	Eptatretus_burgeri
ENSORLG00000023542	-	62	61.250	ENSELUG00000014407	-	96	61.250	Esox_lucius
ENSORLG00000023542	-	61	62.644	ENSHBUG00000023867	-	83	61.453	Haplochromis_burtoni
ENSORLG00000023542	-	62	59.649	ENSHCOG00000007180	-	77	58.523	Hippocampus_comes
ENSORLG00000023542	-	62	57.407	ENSLBEG00000006362	-	78	57.407	Labrus_bergylta
ENSORLG00000023542	-	58	61.261	ENSLOCG00000012121	-	60	61.261	Lepisosteus_oculatus
ENSORLG00000023542	-	61	59.770	ENSMAMG00000017728	-	68	58.659	Mastacembelus_armatus
ENSORLG00000023542	-	61	62.644	ENSMZEG00005001063	-	82	61.453	Maylandia_zebra
ENSORLG00000023542	-	62	69.620	ENSMMOG00000004242	-	96	69.620	Mola_mola
ENSORLG00000023542	-	75	42.661	ENSMEUG00000003051	-	90	39.437	Notamacropus_eugenii
ENSORLG00000023542	-	70	95.455	ENSORLG00020007084	-	82	95.455	Oryzias_latipes_hni
ENSORLG00000023542	-	62	58.580	ENSORLG00020007171	-	95	58.580	Oryzias_latipes_hni
ENSORLG00000023542	-	96	91.786	ENSORLG00020006029	-	93	91.786	Oryzias_latipes_hni
ENSORLG00000023542	-	96	66.092	ENSOMEG00000002000	-	86	65.714	Oryzias_melastigma
ENSORLG00000023542	-	96	56.502	ENSOMEG00000006903	-	85	60.606	Oryzias_melastigma
ENSORLG00000023542	-	96	67.052	ENSOMEG00000021030	-	85	66.667	Oryzias_melastigma
ENSORLG00000023542	-	96	52.124	ENSOMEG00000012368	-	82	66.286	Oryzias_melastigma
ENSORLG00000023542	-	96	60.914	ENSOMEG00000002509	-	88	60.914	Oryzias_melastigma
ENSORLG00000023542	-	60	65.584	ENSOMEG00000009566	-	80	65.584	Oryzias_melastigma
ENSORLG00000023542	-	73	58.871	ENSOMEG00000002084	-	70	61.905	Oryzias_melastigma
ENSORLG00000023542	-	98	42.532	ENSOMEG00000006327	-	97	45.205	Oryzias_melastigma
ENSORLG00000023542	-	96	55.378	ENSOMEG00000023475	-	85	62.944	Oryzias_melastigma
ENSORLG00000023542	-	61	59.195	ENSPREG00000010603	-	60	58.101	Poecilia_reticulata
ENSORLG00000023542	-	61	62.644	ENSPNYG00000020763	-	83	61.453	Pundamilia_nyererei
ENSORLG00000023542	-	62	61.875	ENSPNAG00000018051	-	80	61.875	Pygocentrus_nattereri
ENSORLG00000023542	-	73	54.749	ENSSHAG00000015609	-	81	54.749	Sarcophilus_harrisii
ENSORLG00000023542	-	61	60.494	ENSSDUG00000002394	-	86	60.494	Seriola_dumerili
ENSORLG00000023542	-	64	71.069	ENSSLDG00000024685	-	89	71.975	Seriola_lalandi_dorsalis