EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023592 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3744 bases
Position: chr16:7446184-7449927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000033914	RVT_1	PF00078.27	3.8e-45	1	1
ENSORLP00000033914	RNase_H	PF00075.24	4.7e-11	1	1
ENSORLP00000033914	Exo_endo_phos	PF03372.23	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040109	-	3744	-	ENSORLP00000033914	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00000023592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023592	-	100	99.920	ENSORLG00000026314	-	100	99.920
ENSORLG00000023592	-	100	99.679	ENSORLG00000027174	-	100	99.679
ENSORLG00000023592	-	100	97.033	ENSORLG00000024423	-	100	97.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023592	-	99	44.365	ENSAMXG00000043500	-	99	44.365	Astyanax_mexicanus
ENSORLG00000023592	-	100	45.939	ENSDARG00000099201	BX908731.1	100	45.939	Danio_rerio
ENSORLG00000023592	-	100	45.115	ENSDARG00000103436	BX548028.1	99	45.115	Danio_rerio
ENSORLG00000023592	-	100	45.939	ENSDARG00000103037	CR848788.1	100	45.939	Danio_rerio
ENSORLG00000023592	-	99	45.866	ENSKMAG00000003982	-	100	45.866	Kryptolebias_marmoratus
ENSORLG00000023592	-	99	45.866	ENSKMAG00000004415	-	100	45.866	Kryptolebias_marmoratus
ENSORLG00000023592	-	65	47.672	ENSKMAG00000021014	-	100	47.672	Kryptolebias_marmoratus
ENSORLG00000023592	-	68	45.785	ENSKMAG00000012711	-	100	45.785	Kryptolebias_marmoratus
ENSORLG00000023592	-	71	97.188	ENSORLG00020019901	-	100	97.188	Oryzias_latipes_hni
ENSORLG00000023592	-	100	97.354	ENSORLG00020018543	-	100	97.354	Oryzias_latipes_hni
ENSORLG00000023592	-	100	97.354	ENSORLG00020020238	-	100	97.354	Oryzias_latipes_hni
ENSORLG00000023592	-	100	97.354	ENSORLG00020011427	-	100	97.354	Oryzias_latipes_hni
ENSORLG00000023592	-	88	99.360	ENSORLG00015013792	-	100	99.360	Oryzias_latipes_hsok
ENSORLG00000023592	-	85	48.590	ENSOMEG00000003836	-	98	48.590	Oryzias_melastigma
ENSORLG00000023592	-	97	45.765	ENSPKIG00000019189	-	96	45.765	Paramormyrops_kingsleyae
ENSORLG00000023592	-	78	44.817	ENSXMAG00000023078	-	99	43.865	Xiphophorus_maculatus
ENSORLG00000023592	-	90	46.046	ENSXMAG00000026248	-	99	46.046	Xiphophorus_maculatus
ENSORLG00000023592	-	71	44.271	ENSXMAG00000024143	-	100	44.271	Xiphophorus_maculatus
ENSORLG00000023592	-	61	39.608	ENSXMAG00000025430	-	99	39.608	Xiphophorus_maculatus
ENSORLG00000023592	-	69	45.958	ENSXMAG00000020874	-	95	45.958	Xiphophorus_maculatus
ENSORLG00000023592	-	99	47.096	ENSXMAG00000021755	-	100	47.096	Xiphophorus_maculatus
ENSORLG00000023592	-	99	46.258	ENSXMAG00000021061	-	100	46.258	Xiphophorus_maculatus
ENSORLG00000023592	-	92	43.605	ENSXMAG00000029466	-	100	43.605	Xiphophorus_maculatus
ENSORLG00000023592	-	90	46.046	ENSXMAG00000026588	-	99	46.046	Xiphophorus_maculatus
ENSORLG00000023592	-	63	46.018	ENSXMAG00000023377	-	100	46.018	Xiphophorus_maculatus
ENSORLG00000023592	-	90	46.046	ENSXMAG00000022223	-	99	46.046	Xiphophorus_maculatus
ENSORLG00000023592	-	64	45.792	ENSXMAG00000023126	-	100	45.792	Xiphophorus_maculatus
ENSORLG00000023592	-	78	44.715	ENSXMAG00000029923	-	99	43.768	Xiphophorus_maculatus
ENSORLG00000023592	-	82	43.768	ENSXMAG00000027130	-	99	43.961	Xiphophorus_maculatus
ENSORLG00000023592	-	99	47.096	ENSXMAG00000021070	-	100	47.096	Xiphophorus_maculatus
ENSORLG00000023592	-	99	46.858	ENSXMAG00000028309	-	100	46.858	Xiphophorus_maculatus