EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023794 (Gene tree)
Gene ID: 101156138
Gene Symbol: -
Alias: -
Full Name: retrovirus-related Pol polyprotein from transposon 412
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 1614 bases
Position: chr14:30534500-30536113
Accession: 101156138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042586	RVT_1	PF00078.27	9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046774	-	1614	XM_023962534	ENSORLP00000042586	537 (aa)	XP_023818302	UPI000CE18A4B

Gene Model

Click here to download ENSORLG00000023794's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023794	-	97	41.031	ENSORLG00000021791	-	51	41.031
ENSORLG00000023794	-	99	43.762	ENSORLG00000027443	-	89	43.762
ENSORLG00000023794	-	74	35.049	ENSORLG00000029095	-	54	35.049
ENSORLG00000023794	-	77	48.418	ENSORLG00000027869	-	90	48.418
ENSORLG00000023794	-	96	37.620	ENSORLG00000026847	-	54	37.620
ENSORLG00000023794	-	66	45.404	ENSORLG00000028640	-	67	45.404
ENSORLG00000023794	-	98	34.926	ENSORLG00000023615	-	60	34.926
ENSORLG00000023794	-	98	37.218	ENSORLG00000025169	-	55	37.218
ENSORLG00000023794	-	76	36.715	ENSORLG00000027231	-	78	36.715

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023794	-	59	37.188	ENSAPOG00000008925	-	88	37.188	Acanthochromis_polyacanthus
ENSORLG00000023794	-	70	32.637	ENSAOCG00000003030	-	51	32.637	Amphiprion_ocellaris
ENSORLG00000023794	-	97	36.961	ENSAPEG00000014936	-	53	37.121	Amphiprion_percula
ENSORLG00000023794	-	97	38.113	ENSAPEG00000014949	-	75	38.113	Amphiprion_percula
ENSORLG00000023794	-	68	30.534	ENSAPEG00000006765	-	60	30.280	Amphiprion_percula
ENSORLG00000023794	-	53	41.463	ENSAPEG00000005752	-	67	41.463	Amphiprion_percula
ENSORLG00000023794	-	91	34.661	ENSACLG00000007712	-	82	34.661	Astatotilapia_calliptera
ENSORLG00000023794	-	70	30.170	ENSACLG00000012278	-	51	30.170	Astatotilapia_calliptera
ENSORLG00000023794	-	99	34.317	ENSACLG00000004561	-	51	34.317	Astatotilapia_calliptera
ENSORLG00000023794	-	62	42.229	ENSACLG00000013289	-	99	42.229	Astatotilapia_calliptera
ENSORLG00000023794	-	78	41.981	ENSACLG00000013847	-	96	41.981	Astatotilapia_calliptera
ENSORLG00000023794	-	60	40.308	ENSACLG00000009861	-	64	40.308	Astatotilapia_calliptera
ENSORLG00000023794	-	67	30.789	ENSACLG00000005847	-	53	30.789	Astatotilapia_calliptera
ENSORLG00000023794	-	76	39.952	ENSACLG00000001380	-	70	39.952	Astatotilapia_calliptera
ENSORLG00000023794	-	68	39.892	ENSAMXG00000038502	-	74	39.892	Astyanax_mexicanus
ENSORLG00000023794	-	65	40.000	ENSAMXG00000039106	-	68	40.000	Astyanax_mexicanus
ENSORLG00000023794	-	66	40.000	ENSAMXG00000031032	-	94	40.000	Astyanax_mexicanus
ENSORLG00000023794	-	52	38.869	ENSAMXG00000043469	-	60	38.869	Astyanax_mexicanus
ENSORLG00000023794	-	61	33.634	ENSCPBG00000001119	-	73	33.728	Chrysemys_picta_bellii
ENSORLG00000023794	-	99	32.657	ENSCSEG00000010442	-	52	32.657	Cynoglossus_semilaevis
ENSORLG00000023794	-	97	32.022	ENSCVAG00000019870	-	69	32.022	Cyprinodon_variegatus
ENSORLG00000023794	-	91	39.837	ENSELUG00000022230	-	59	39.837	Esox_lucius
ENSORLG00000023794	-	70	32.461	ENSGAGG00000002613	-	51	32.461	Gopherus_agassizii
ENSORLG00000023794	-	76	30.476	ENSGAGG00000013650	-	74	30.476	Gopherus_agassizii
ENSORLG00000023794	-	74	33.577	ENSGAGG00000007173	-	63	33.577	Gopherus_agassizii
ENSORLG00000023794	-	98	30.983	ENSGAGG00000022002	-	62	30.983	Gopherus_agassizii
ENSORLG00000023794	-	63	37.427	ENSHBUG00000009088	-	92	37.427	Haplochromis_burtoni
ENSORLG00000023794	-	97	30.899	ENSHCOG00000019997	-	93	30.899	Hippocampus_comes
ENSORLG00000023794	-	72	31.472	ENSIPUG00000003645	-	79	31.472	Ictalurus_punctatus
ENSORLG00000023794	-	99	38.333	ENSKMAG00000013568	-	66	38.333	Kryptolebias_marmoratus
ENSORLG00000023794	-	89	37.552	ENSKMAG00000003188	-	65	37.552	Kryptolebias_marmoratus
ENSORLG00000023794	-	57	43.269	ENSKMAG00000007574	-	60	43.269	Kryptolebias_marmoratus
ENSORLG00000023794	-	59	36.562	ENSLBEG00000003912	-	81	36.562	Labrus_bergylta
ENSORLG00000023794	-	63	30.548	ENSLACG00000009347	-	55	30.548	Latimeria_chalumnae
ENSORLG00000023794	-	78	30.166	ENSLACG00000017143	-	62	30.166	Latimeria_chalumnae
ENSORLG00000023794	-	96	31.380	ENSLACG00000004818	-	50	31.380	Latimeria_chalumnae
ENSORLG00000023794	-	52	33.798	ENSLACG00000003900	-	87	33.798	Latimeria_chalumnae
ENSORLG00000023794	-	61	33.134	ENSLOCG00000017292	-	100	33.134	Lepisosteus_oculatus
ENSORLG00000023794	-	59	40.248	ENSMZEG00005023829	-	64	40.308	Maylandia_zebra
ENSORLG00000023794	-	68	30.051	ENSMZEG00005017878	-	59	30.280	Maylandia_zebra
ENSORLG00000023794	-	52	35.664	ENSMALG00000005075	-	88	35.664	Monopterus_albus
ENSORLG00000023794	-	51	39.427	ENSNBRG00000002791	-	90	39.427	Neolamprologus_brichardi
ENSORLG00000023794	-	55	38.333	ENSNBRG00000002477	-	87	38.333	Neolamprologus_brichardi
ENSORLG00000023794	-	97	35.448	ENSORLG00020019030	-	61	35.448	Oryzias_latipes_hni
ENSORLG00000023794	-	74	38.235	ENSORLG00020002002	-	64	38.235	Oryzias_latipes_hni
ENSORLG00000023794	-	69	38.095	ENSORLG00020016252	-	98	38.095	Oryzias_latipes_hni
ENSORLG00000023794	-	65	39.216	ENSORLG00020012706	-	89	39.216	Oryzias_latipes_hni
ENSORLG00000023794	-	74	36.765	ENSORLG00020009127	-	79	36.765	Oryzias_latipes_hni
ENSORLG00000023794	-	60	32.219	ENSORLG00020016924	-	77	32.219	Oryzias_latipes_hni
ENSORLG00000023794	-	72	38.107	ENSORLG00020000154	-	95	38.107	Oryzias_latipes_hni
ENSORLG00000023794	-	56	36.156	ENSORLG00020021288	-	93	36.156	Oryzias_latipes_hni
ENSORLG00000023794	-	98	34.007	ENSORLG00015017579	-	64	34.559	Oryzias_latipes_hsok
ENSORLG00000023794	-	91	44.057	ENSORLG00015009803	-	99	44.057	Oryzias_latipes_hsok
ENSORLG00000023794	-	67	38.904	ENSORLG00015021822	-	97	38.649	Oryzias_latipes_hsok
ENSORLG00000023794	-	97	35.634	ENSORLG00015017997	-	52	35.634	Oryzias_latipes_hsok
ENSORLG00000023794	-	96	30.608	ENSORLG00015003846	-	53	30.608	Oryzias_latipes_hsok
ENSORLG00000023794	-	77	34.670	ENSORLG00015008138	-	80	34.670	Oryzias_latipes_hsok
ENSORLG00000023794	-	99	36.969	ENSORLG00015013369	-	67	36.969	Oryzias_latipes_hsok
ENSORLG00000023794	-	99	62.172	ENSORLG00015022353	-	59	62.172	Oryzias_latipes_hsok
ENSORLG00000023794	-	97	41.221	ENSOMEG00000013073	-	84	41.221	Oryzias_melastigma
ENSORLG00000023794	-	65	31.564	ENSOMEG00000013479	-	57	31.564	Oryzias_melastigma
ENSORLG00000023794	-	97	34.888	ENSOMEG00000013437	-	88	34.888	Oryzias_melastigma
ENSORLG00000023794	-	98	34.823	ENSOMEG00000017295	-	51	34.686	Oryzias_melastigma
ENSORLG00000023794	-	71	35.325	ENSOMEG00000005634	-	52	35.325	Oryzias_melastigma
ENSORLG00000023794	-	52	30.526	ENSPKIG00000019619	-	99	30.526	Paramormyrops_kingsleyae
ENSORLG00000023794	-	76	33.656	ENSPKIG00000005406	-	68	33.656	Paramormyrops_kingsleyae
ENSORLG00000023794	-	66	30.412	ENSPKIG00000012990	-	56	30.412	Paramormyrops_kingsleyae
ENSORLG00000023794	-	67	31.608	ENSPKIG00000015048	-	52	31.608	Paramormyrops_kingsleyae
ENSORLG00000023794	-	65	42.697	ENSPKIG00000007140	-	80	42.697	Paramormyrops_kingsleyae
ENSORLG00000023794	-	68	30.481	ENSPSIG00000001205	-	79	30.481	Pelodiscus_sinensis
ENSORLG00000023794	-	55	31.596	ENSPSIG00000014032	-	88	31.596	Pelodiscus_sinensis
ENSORLG00000023794	-	70	30.457	ENSPSIG00000000226	-	73	30.457	Pelodiscus_sinensis
ENSORLG00000023794	-	64	32.558	ENSPSIG00000000007	-	85	32.558	Pelodiscus_sinensis
ENSORLG00000023794	-	68	31.818	ENSPSIG00000001757	-	90	31.818	Pelodiscus_sinensis
ENSORLG00000023794	-	56	30.844	ENSPSIG00000001249	-	87	30.844	Pelodiscus_sinensis
ENSORLG00000023794	-	68	31.915	ENSPSIG00000001197	-	90	31.915	Pelodiscus_sinensis
ENSORLG00000023794	-	63	31.322	ENSPSIG00000000193	-	68	31.322	Pelodiscus_sinensis
ENSORLG00000023794	-	70	31.593	ENSPSIG00000001150	-	50	31.593	Pelodiscus_sinensis
ENSORLG00000023794	-	69	31.234	ENSPSIG00000001614	-	54	31.234	Pelodiscus_sinensis
ENSORLG00000023794	-	66	31.608	ENSPSIG00000001800	-	80	31.608	Pelodiscus_sinensis
ENSORLG00000023794	-	69	41.534	ENSPMEG00000018862	-	75	41.534	Poecilia_mexicana
ENSORLG00000023794	-	92	30.845	ENSPMEG00000017235	-	80	30.648	Poecilia_mexicana
ENSORLG00000023794	-	70	40.209	ENSPREG00000022349	-	82	40.209	Poecilia_reticulata
ENSORLG00000023794	-	55	38.591	ENSPNYG00000004598	-	98	38.591	Pundamilia_nyererei
ENSORLG00000023794	-	62	33.136	ENSPNAG00000009058	-	67	33.136	Pygocentrus_nattereri
ENSORLG00000023794	-	68	32.075	ENSPNAG00000010299	-	72	32.075	Pygocentrus_nattereri
ENSORLG00000023794	-	67	40.437	ENSPNAG00000015949	-	94	40.437	Pygocentrus_nattereri
ENSORLG00000023794	-	72	39.642	ENSSDUG00000011043	-	50	39.642	Seriola_dumerili
ENSORLG00000023794	-	90	34.747	ENSSPAG00000008169	-	76	34.747	Stegastes_partitus
ENSORLG00000023794	-	89	30.832	ENSTRUG00000024803	-	94	30.832	Takifugu_rubripes
ENSORLG00000023794	-	56	33.333	ENSXMAG00000023507	-	59	33.333	Xiphophorus_maculatus