EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000023958 (Gene tree)
Gene ID: 110015225
Gene Symbol: si:ch1073-296i8.2
Alias: -
Full Name: uncharacterized LOC110015225
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7122 bases
Position: chr6:8662338-8669459
Accession: 110015225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036599	RNase_T	PF00929.24	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000033733	-	1516	XM_023955609	ENSORLP00000036599	220 (aa)	XP_023811377	UPI000CE22A04

Gene Model

Click here to download ENSORLG00000023958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000023958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000023958	si:ch1073-296i8.2	87	41.451	ENSORLG00000030645	si:ch1073-385f13.3	86	41.451

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000023958	si:ch1073-296i8.2	95	56.680	ENSAOCG00000011593	si:ch1073-296i8.2	87	56.680	Amphiprion_ocellaris
ENSORLG00000023958	si:ch1073-296i8.2	100	54.651	ENSAPEG00000012492	si:ch1073-296i8.2	89	54.651	Amphiprion_percula
ENSORLG00000023958	si:ch1073-296i8.2	84	40.860	ENSATEG00000021542	si:ch1073-385f13.3	94	40.860	Anabas_testudineus
ENSORLG00000023958	si:ch1073-296i8.2	95	70.000	ENSATEG00000021547	si:ch1073-296i8.2	82	70.000	Anabas_testudineus
ENSORLG00000023958	si:ch1073-296i8.2	80	42.938	ENSACLG00000023991	-	54	42.938	Astatotilapia_calliptera
ENSORLG00000023958	si:ch1073-296i8.2	89	41.414	ENSCVAG00000001533	-	96	41.414	Cyprinodon_variegatus
ENSORLG00000023958	si:ch1073-296i8.2	92	45.631	ENSDARG00000092584	si:ch1073-385f13.3	84	45.631	Danio_rerio
ENSORLG00000023958	si:ch1073-296i8.2	86	58.201	ENSDARG00000093773	si:ch1073-296i8.2	80	58.201	Danio_rerio
ENSORLG00000023958	si:ch1073-296i8.2	88	40.513	ENSFHEG00000018181	-	97	40.513	Fundulus_heteroclitus
ENSORLG00000023958	si:ch1073-296i8.2	95	69.811	ENSFHEG00000018188	si:ch1073-296i8.2	86	69.811	Fundulus_heteroclitus
ENSORLG00000023958	si:ch1073-296i8.2	80	64.205	ENSGMOG00000019335	si:ch1073-296i8.2	99	64.205	Gadus_morhua
ENSORLG00000023958	si:ch1073-296i8.2	82	46.995	ENSGMOG00000019565	-	96	46.995	Gadus_morhua
ENSORLG00000023958	si:ch1073-296i8.2	80	69.143	ENSGACG00000007185	si:ch1073-296i8.2	97	69.143	Gasterosteus_aculeatus
ENSORLG00000023958	si:ch1073-296i8.2	84	44.086	ENSHBUG00000007541	si:ch1073-385f13.3	94	44.086	Haplochromis_burtoni
ENSORLG00000023958	si:ch1073-296i8.2	90	59.799	ENSHCOG00000008574	si:ch1073-296i8.2	84	59.799	Hippocampus_comes
ENSORLG00000023958	si:ch1073-296i8.2	93	70.244	ENSKMAG00000015660	si:ch1073-296i8.2	90	70.244	Kryptolebias_marmoratus
ENSORLG00000023958	si:ch1073-296i8.2	82	44.809	ENSKMAG00000015669	-	92	44.809	Kryptolebias_marmoratus
ENSORLG00000023958	si:ch1073-296i8.2	86	61.257	ENSLBEG00000019623	si:ch1073-296i8.2	74	61.257	Labrus_bergylta
ENSORLG00000023958	si:ch1073-296i8.2	90	44.444	ENSLOCG00000014933	-	99	44.444	Lepisosteus_oculatus
ENSORLG00000023958	si:ch1073-296i8.2	79	44.886	ENSMAMG00000023075	si:ch1073-385f13.3	90	44.886	Mastacembelus_armatus
ENSORLG00000023958	si:ch1073-296i8.2	66	68.493	ENSMMOG00000018979	si:ch1073-296i8.2	69	68.493	Mola_mola
ENSORLG00000023958	si:ch1073-296i8.2	86	42.188	ENSMALG00000015952	si:ch1073-385f13.3	97	42.188	Monopterus_albus
ENSORLG00000023958	si:ch1073-296i8.2	84	44.624	ENSONIG00000012794	si:ch1073-385f13.3	94	44.624	Oreochromis_niloticus
ENSORLG00000023958	si:ch1073-296i8.2	100	97.727	ENSORLG00020021912	si:ch1073-296i8.2	100	97.727	Oryzias_latipes_hni
ENSORLG00000023958	si:ch1073-296i8.2	83	42.162	ENSORLG00020021903	-	93	42.162	Oryzias_latipes_hni
ENSORLG00000023958	si:ch1073-296i8.2	100	96.818	ENSORLG00015015303	si:ch1073-296i8.2	100	96.818	Oryzias_latipes_hsok
ENSORLG00000023958	si:ch1073-296i8.2	87	37.824	ENSPKIG00000023552	-	90	37.824	Paramormyrops_kingsleyae
ENSORLG00000023958	si:ch1073-296i8.2	86	38.220	ENSPFOG00000005521	si:ch1073-385f13.3	96	38.220	Poecilia_formosa
ENSORLG00000023958	si:ch1073-296i8.2	79	42.614	ENSPFOG00000021742	-	92	42.614	Poecilia_formosa
ENSORLG00000023958	si:ch1073-296i8.2	81	42.222	ENSPMEG00000013087	si:ch1073-385f13.3	93	42.222	Poecilia_mexicana
ENSORLG00000023958	si:ch1073-296i8.2	86	38.220	ENSPMEG00000013096	si:ch1073-385f13.3	96	38.220	Poecilia_mexicana
ENSORLG00000023958	si:ch1073-296i8.2	79	36.453	ENSPREG00000013537	-	76	36.453	Poecilia_reticulata
ENSORLG00000023958	si:ch1073-296i8.2	84	47.568	ENSPNAG00000018956	si:ch1073-385f13.3	98	47.568	Pygocentrus_nattereri
ENSORLG00000023958	si:ch1073-296i8.2	92	68.473	ENSSMAG00000004874	si:ch1073-296i8.2	83	66.667	Scophthalmus_maximus
ENSORLG00000023958	si:ch1073-296i8.2	84	46.237	ENSSLDG00000002379	si:ch1073-385f13.3	93	46.237	Seriola_lalandi_dorsalis
ENSORLG00000023958	si:ch1073-296i8.2	65	32.886	ENSSPUG00000015575	-	59	32.886	Sphenodon_punctatus
ENSORLG00000023958	si:ch1073-296i8.2	85	70.745	ENSSPAG00000012797	si:ch1073-296i8.2	96	70.745	Stegastes_partitus
ENSORLG00000023958	si:ch1073-296i8.2	85	66.489	ENSTNIG00000010399	si:ch1073-296i8.2	82	66.489	Tetraodon_nigroviridis
ENSORLG00000023958	si:ch1073-296i8.2	88	39.487	ENSXMAG00000021869	si:ch1073-385f13.3	98	39.487	Xiphophorus_maculatus