EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000024423 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3744 bases
Position: chr22:17092870-17096613
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043497	RVT_1	PF00078.27	2.7e-45	1	1
ENSORLP00000043497	RNase_H	PF00075.24	5e-09	1	1
ENSORLP00000043497	Exo_endo_phos	PF03372.23	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000038306	-	3744	-	ENSORLP00000043497	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00000024423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000024423	-	100	96.953	ENSORLG00000026314	-	100	96.953
ENSORLG00000024423	-	100	97.354	ENSORLG00000027174	-	100	97.354
ENSORLG00000024423	-	100	97.033	ENSORLG00000023592	-	100	97.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024423	-	99	44.125	ENSAMXG00000043500	-	99	44.125	Astyanax_mexicanus
ENSORLG00000024423	-	100	44.877	ENSDARG00000103436	BX548028.1	99	44.877	Danio_rerio
ENSORLG00000024423	-	100	45.737	ENSDARG00000103037	CR848788.1	100	45.737	Danio_rerio
ENSORLG00000024423	-	100	45.737	ENSDARG00000099201	BX908731.1	100	45.737	Danio_rerio
ENSORLG00000024423	-	99	45.744	ENSKMAG00000004415	-	100	45.744	Kryptolebias_marmoratus
ENSORLG00000024423	-	65	47.304	ENSKMAG00000021014	-	100	47.304	Kryptolebias_marmoratus
ENSORLG00000024423	-	99	45.744	ENSKMAG00000003982	-	100	45.744	Kryptolebias_marmoratus
ENSORLG00000024423	-	68	45.667	ENSKMAG00000012711	-	100	45.667	Kryptolebias_marmoratus
ENSORLG00000024423	-	71	98.988	ENSORLG00020019901	-	100	98.988	Oryzias_latipes_hni
ENSORLG00000024423	-	100	98.957	ENSORLG00020011427	-	100	98.957	Oryzias_latipes_hni
ENSORLG00000024423	-	100	98.957	ENSORLG00020018543	-	100	98.957	Oryzias_latipes_hni
ENSORLG00000024423	-	100	98.957	ENSORLG00020020238	-	100	98.957	Oryzias_latipes_hni
ENSORLG00000024423	-	88	97.532	ENSORLG00015013792	-	100	97.532	Oryzias_latipes_hsok
ENSORLG00000024423	-	85	48.636	ENSOMEG00000003836	-	98	48.636	Oryzias_melastigma
ENSORLG00000024423	-	97	45.765	ENSPKIG00000019189	-	96	45.765	Paramormyrops_kingsleyae
ENSORLG00000024423	-	99	46.099	ENSXMAG00000021061	-	100	46.099	Xiphophorus_maculatus
ENSORLG00000024423	-	92	43.078	ENSXMAG00000029466	-	99	43.078	Xiphophorus_maculatus
ENSORLG00000024423	-	63	46.086	ENSXMAG00000023377	-	100	46.086	Xiphophorus_maculatus
ENSORLG00000024423	-	90	45.782	ENSXMAG00000022223	-	99	45.782	Xiphophorus_maculatus
ENSORLG00000024423	-	99	47.059	ENSXMAG00000021755	-	100	47.059	Xiphophorus_maculatus
ENSORLG00000024423	-	64	45.668	ENSXMAG00000023126	-	100	45.668	Xiphophorus_maculatus
ENSORLG00000024423	-	78	44.919	ENSXMAG00000029923	-	99	43.865	Xiphophorus_maculatus
ENSORLG00000024423	-	82	44.155	ENSXMAG00000027130	-	99	44.155	Xiphophorus_maculatus
ENSORLG00000024423	-	61	39.712	ENSXMAG00000025430	-	99	39.712	Xiphophorus_maculatus
ENSORLG00000024423	-	99	46.820	ENSXMAG00000028309	-	100	46.820	Xiphophorus_maculatus
ENSORLG00000024423	-	99	47.059	ENSXMAG00000021070	-	100	47.059	Xiphophorus_maculatus
ENSORLG00000024423	-	90	45.782	ENSXMAG00000026588	-	99	45.782	Xiphophorus_maculatus
ENSORLG00000024423	-	78	45.020	ENSXMAG00000023078	-	99	43.961	Xiphophorus_maculatus
ENSORLG00000024423	-	90	45.782	ENSXMAG00000026248	-	99	45.782	Xiphophorus_maculatus
ENSORLG00000024423	-	71	43.604	ENSXMAG00000024143	-	100	43.604	Xiphophorus_maculatus
ENSORLG00000024423	-	69	45.757	ENSXMAG00000020874	-	95	45.757	Xiphophorus_maculatus