EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000024749 (Gene tree)
Gene ID: 101169319
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1104 bases
Position: chr18:28886300-28887403
Accession: 101169319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000014520	RRM_5	PF13893.6	3.8e-06	1	1
ENSORLP00000014520	RRM_1	PF00076.22	4.3e-25	1	2
ENSORLP00000014520	RRM_1	PF00076.22	4.3e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000014521	-	1030	XM_004080058	ENSORLP00000014520	335 (aa)	XP_004080106	H2M7R2

Gene Model

Click here to download ENSORLG00000024749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000024749	rbm4.3	96	52.450	ENSORLG00000011589	rbm4.3	96	54.070
ENSORLG00000024749	rbm4.3	96	51.009	ENSORLG00000012473	rbm4.3	96	52.616
ENSORLG00000024749	rbm4.3	89	50.649	ENSORLG00000012496	rbm4.1	95	50.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024749	rbm4.3	95	55.357	ENSAPOG00000002953	rbm4.3	96	60.714	Acanthochromis_polyacanthus
ENSORLG00000024749	rbm4.3	100	68.696	ENSAPOG00000002991	rbm4.3	100	69.855	Acanthochromis_polyacanthus
ENSORLG00000024749	rbm4.3	95	53.412	ENSACIG00000021311	-	96	57.270	Amphilophus_citrinellus
ENSORLG00000024749	rbm4.3	100	70.317	ENSACIG00000021295	rbm4.3	100	70.605	Amphilophus_citrinellus
ENSORLG00000024749	rbm4.3	100	70.231	ENSAOCG00000007992	rbm4.3	100	69.653	Amphiprion_ocellaris
ENSORLG00000024749	rbm4.3	95	55.689	ENSAOCG00000008015	rbm4.3	96	61.377	Amphiprion_ocellaris
ENSORLG00000024749	rbm4.3	100	69.942	ENSAPEG00000017288	rbm4.3	100	69.364	Amphiprion_percula
ENSORLG00000024749	rbm4.3	95	57.658	ENSAPEG00000017324	rbm4.3	96	60.961	Amphiprion_percula
ENSORLG00000024749	rbm4.3	96	69.880	ENSATEG00000019395	rbm4.3	96	70.091	Anabas_testudineus
ENSORLG00000024749	rbm4.3	95	56.973	ENSATEG00000019375	rbm4.3	96	61.078	Anabas_testudineus
ENSORLG00000024749	rbm4.3	95	52.679	ENSACLG00000010620	-	96	57.567	Astatotilapia_calliptera
ENSORLG00000024749	rbm4.3	100	70.029	ENSACLG00000010642	rbm4.3	100	70.029	Astatotilapia_calliptera
ENSORLG00000024749	rbm4.3	56	64.249	ENSAMXG00000040224	rbm4.3	78	62.694	Astyanax_mexicanus
ENSORLG00000024749	rbm4.3	99	53.390	ENSCSEG00000013659	rbm4.3	96	57.692	Cynoglossus_semilaevis
ENSORLG00000024749	rbm4.3	96	56.176	ENSCVAG00000008508	rbm4.3	96	57.310	Cyprinodon_variegatus
ENSORLG00000024749	rbm4.3	100	67.147	ENSCVAG00000008502	rbm4.3	100	68.678	Cyprinodon_variegatus
ENSORLG00000024749	rbm4.3	98	56.322	ENSDARG00000022129	rbm4.3	99	60.227	Danio_rerio
ENSORLG00000024749	rbm4.3	97	60.345	ENSELUG00000022155	rbm4.3	97	60.997	Esox_lucius
ENSORLG00000024749	rbm4.3	97	59.366	ENSELUG00000022150	rbm4.3	97	60.588	Esox_lucius
ENSORLG00000024749	rbm4.3	97	61.877	ENSELUG00000022168	rbm4.3	97	62.059	Esox_lucius
ENSORLG00000024749	rbm4.3	100	64.023	ENSFHEG00000023096	rbm4.3	100	66.006	Fundulus_heteroclitus
ENSORLG00000024749	rbm4.3	79	59.353	ENSFHEG00000023137	rbm4.3	82	61.597	Fundulus_heteroclitus
ENSORLG00000024749	rbm4.3	96	64.776	ENSGAFG00000001935	rbm4.3	97	63.881	Gambusia_affinis
ENSORLG00000024749	rbm4.3	100	65.143	ENSGACG00000019980	rbm4.3	100	64.857	Gasterosteus_aculeatus
ENSORLG00000024749	rbm4.3	96	69.578	ENSHBUG00000009051	rbm4.3	100	70.029	Haplochromis_burtoni
ENSORLG00000024749	rbm4.3	95	52.679	ENSHBUG00000009020	-	96	57.567	Haplochromis_burtoni
ENSORLG00000024749	rbm4.3	94	53.754	ENSHCOG00000010349	rbm4.3	99	58.046	Hippocampus_comes
ENSORLG00000024749	rbm4.3	96	57.185	ENSIPUG00000022943	RBM4B	97	58.065	Ictalurus_punctatus
ENSORLG00000024749	rbm4.3	97	53.198	ENSKMAG00000017468	rbm4.3	96	55.457	Kryptolebias_marmoratus
ENSORLG00000024749	rbm4.3	95	66.265	ENSKMAG00000014541	rbm4.3	94	67.976	Kryptolebias_marmoratus
ENSORLG00000024749	rbm4.3	56	68.617	ENSLBEG00000001025	rbm4.3	84	67.914	Labrus_bergylta
ENSORLG00000024749	rbm4.3	95	56.380	ENSLBEG00000001071	-	96	60.299	Labrus_bergylta
ENSORLG00000024749	rbm4.3	94	50.824	ENSLOCG00000002755	rbm4.3	97	51.226	Lepisosteus_oculatus
ENSORLG00000024749	rbm4.3	95	56.548	ENSMAMG00000004715	-	81	61.194	Mastacembelus_armatus
ENSORLG00000024749	rbm4.3	96	69.697	ENSMAMG00000004701	rbm4.3	96	69.697	Mastacembelus_armatus
ENSORLG00000024749	rbm4.3	100	70.029	ENSMZEG00005028540	rbm4.3	100	70.029	Maylandia_zebra
ENSORLG00000024749	rbm4.3	83	70.345	ENSMZEG00005007441	rbm4.3	79	70.000	Maylandia_zebra
ENSORLG00000024749	rbm4.3	95	49.405	ENSMZEG00005007417	-	97	53.982	Maylandia_zebra
ENSORLG00000024749	rbm4.3	77	52.453	ENSMZEG00005028537	-	85	55.229	Maylandia_zebra
ENSORLG00000024749	rbm4.3	100	67.836	ENSMMOG00000012191	rbm4.3	100	67.544	Mola_mola
ENSORLG00000024749	rbm4.3	85	54.785	ENSMALG00000003001	rbm4.3	87	61.486	Monopterus_albus
ENSORLG00000024749	rbm4.3	100	68.895	ENSMALG00000015014	-	100	68.895	Monopterus_albus
ENSORLG00000024749	rbm4.3	93	67.391	ENSMALG00000003032	rbm4.3	95	69.256	Monopterus_albus
ENSORLG00000024749	rbm4.3	100	70.231	ENSNBRG00000012372	rbm4.3	100	70.231	Neolamprologus_brichardi
ENSORLG00000024749	rbm4.3	100	68.000	ENSONIG00000018378	rbm4.3	100	68.000	Oreochromis_niloticus
ENSORLG00000024749	rbm4.3	95	52.679	ENSONIG00000018380	-	96	57.567	Oreochromis_niloticus
ENSORLG00000024749	rbm4.3	96	52.450	ENSORLG00020012474	rbm4.3	96	54.070	Oryzias_latipes_hni
ENSORLG00000024749	rbm4.3	96	51.009	ENSORLG00020012464	rbm4.3	96	52.616	Oryzias_latipes_hni
ENSORLG00000024749	rbm4.3	100	97.910	ENSORLG00020012482	rbm4.3	100	97.910	Oryzias_latipes_hni
ENSORLG00000024749	rbm4.3	96	52.174	ENSORLG00015013698	rbm4.3	96	54.360	Oryzias_latipes_hsok
ENSORLG00000024749	rbm4.3	100	97.313	ENSORLG00015013721	rbm4.3	100	97.313	Oryzias_latipes_hsok
ENSORLG00000024749	rbm4.3	96	51.585	ENSORLG00015013686	rbm4.3	96	53.198	Oryzias_latipes_hsok
ENSORLG00000024749	rbm4.3	99	50.689	ENSOMEG00000005918	rbm4.3	94	55.422	Oryzias_melastigma
ENSORLG00000024749	rbm4.3	100	80.588	ENSOMEG00000005950	rbm4.3	100	80.588	Oryzias_melastigma
ENSORLG00000024749	rbm4.3	96	50.142	ENSOMEG00000005929	rbm4.3	96	53.913	Oryzias_melastigma
ENSORLG00000024749	rbm4.3	92	56.418	ENSPKIG00000007001	rbm4.3	97	56.380	Paramormyrops_kingsleyae
ENSORLG00000024749	rbm4.3	100	67.236	ENSPLAG00000006077	rbm4.3	100	67.898	Poecilia_latipinna
ENSORLG00000024749	rbm4.3	99	54.722	ENSPLAG00000006131	rbm4.3	97	56.105	Poecilia_latipinna
ENSORLG00000024749	rbm4.3	99	54.722	ENSPMEG00000024271	rbm4.3	97	56.395	Poecilia_mexicana
ENSORLG00000024749	rbm4.3	100	68.000	ENSPMEG00000024260	rbm4.3	100	68.661	Poecilia_mexicana
ENSORLG00000024749	rbm4.3	96	56.069	ENSPMEG00000024263	rbm4.3	97	57.558	Poecilia_mexicana
ENSORLG00000024749	rbm4.3	100	68.661	ENSPREG00000002093	-	100	68.661	Poecilia_reticulata
ENSORLG00000024749	rbm4.3	99	56.140	ENSPREG00000002156	rbm4.3	96	55.120	Poecilia_reticulata
ENSORLG00000024749	rbm4.3	95	52.679	ENSPNYG00000018541	rbm4.3	96	57.567	Pundamilia_nyererei
ENSORLG00000024749	rbm4.3	100	69.540	ENSPNYG00000018564	rbm4.3	100	69.540	Pundamilia_nyererei
ENSORLG00000024749	rbm4.3	97	54.237	ENSPNAG00000013053	rbm4.3	97	58.286	Pygocentrus_nattereri
ENSORLG00000024749	rbm4.3	97	54.420	ENSSFOG00015015563	rbm4.3	97	54.749	Scleropages_formosus
ENSORLG00000024749	rbm4.3	96	55.490	ENSSMAG00000013644	rbm4.3	96	59.104	Scophthalmus_maximus
ENSORLG00000024749	rbm4.3	100	64.928	ENSSMAG00000013653	rbm4.3	100	64.928	Scophthalmus_maximus
ENSORLG00000024749	rbm4.3	96	55.882	ENSSDUG00000018435	rbm4.3	97	60.896	Seriola_dumerili
ENSORLG00000024749	rbm4.3	100	68.497	ENSSDUG00000018422	rbm4.3	100	68.497	Seriola_dumerili
ENSORLG00000024749	rbm4.3	96	55.882	ENSSLDG00000017204	rbm4.3	97	60.896	Seriola_lalandi_dorsalis
ENSORLG00000024749	rbm4.3	100	68.208	ENSSLDG00000017182	rbm4.3	96	68.485	Seriola_lalandi_dorsalis
ENSORLG00000024749	rbm4.3	96	66.767	ENSSPAG00000008041	rbm4.3	82	67.372	Stegastes_partitus
ENSORLG00000024749	rbm4.3	99	55.301	ENSSPAG00000008062	rbm4.3	97	60.896	Stegastes_partitus
ENSORLG00000024749	rbm4.3	100	66.957	ENSTRUG00000023874	rbm4.3	100	67.435	Takifugu_rubripes
ENSORLG00000024749	rbm4.3	97	55.780	ENSTRUG00000020901	rbm4.3	96	60.534	Takifugu_rubripes
ENSORLG00000024749	rbm4.3	97	55.102	ENSTNIG00000005668	rbm4.3	96	58.683	Tetraodon_nigroviridis
ENSORLG00000024749	rbm4.3	96	57.310	ENSXCOG00000006001	rbm4.3	96	57.602	Xiphophorus_couchianus
ENSORLG00000024749	rbm4.3	96	68.263	ENSXCOG00000005996	rbm4.3	97	69.552	Xiphophorus_couchianus
ENSORLG00000024749	rbm4.3	96	67.857	ENSXMAG00000025173	rbm4.3	97	69.139	Xiphophorus_maculatus
ENSORLG00000024749	rbm4.3	99	57.627	ENSXMAG00000011698	rbm4.3	97	56.686	Xiphophorus_maculatus
ENSORLG00000024749	rbm4.3	96	57.310	ENSXMAG00000021997	rbm4.3	96	57.602	Xiphophorus_maculatus