EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000024765 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2744 bases
Position: chr11:19172915-19175658
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039861	zf-C2H2	PF00096.26	8e-20	1	3
ENSORLP00000039861	zf-C2H2	PF00096.26	8e-20	2	3
ENSORLP00000039861	zf-C2H2	PF00096.26	8e-20	3	3
ENSORLP00000039861	zf-met	PF12874.7	1.3e-11	1	2
ENSORLP00000039861	zf-met	PF12874.7	1.3e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000038207	-	1365	-	ENSORLP00000039861	454 (aa)	-	-

Gene Model

Click here to download ENSORLG00000024765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000024765	-	52	37.415	ENSORLG00000024789	-	74	37.415
ENSORLG00000024765	-	56	44.444	ENSORLG00000030610	-	66	46.795
ENSORLG00000024765	-	53	44.030	ENSORLG00000007097	-	95	45.882
ENSORLG00000024765	-	52	41.463	ENSORLG00000022187	-	61	41.667
ENSORLG00000024765	-	72	43.558	ENSORLG00000029896	-	91	43.558
ENSORLG00000024765	-	96	83.333	ENSORLG00000020718	sall3a	52	83.333
ENSORLG00000024765	-	55	42.675	ENSORLG00000028381	-	89	40.645
ENSORLG00000024765	-	50	46.809	ENSORLG00000005060	GFI1	90	46.809
ENSORLG00000024765	-	52	45.324	ENSORLG00000027186	-	83	44.516
ENSORLG00000024765	-	56	36.232	ENSORLG00000012472	znf319b	92	36.232
ENSORLG00000024765	-	56	39.744	ENSORLG00000025717	-	84	43.182
ENSORLG00000024765	-	53	36.036	ENSORLG00000027418	-	65	38.750
ENSORLG00000024765	-	50	43.210	ENSORLG00000028091	-	83	43.827
ENSORLG00000024765	-	83	35.227	ENSORLG00000001615	-	72	35.227
ENSORLG00000024765	-	58	42.105	ENSORLG00000023744	-	74	45.161
ENSORLG00000024765	-	50	56.818	ENSORLG00000000956	znf341	62	56.818
ENSORLG00000024765	-	65	40.385	ENSORLG00000029027	-	94	40.385
ENSORLG00000024765	-	61	41.899	ENSORLG00000025080	-	87	45.324
ENSORLG00000024765	-	64	38.217	ENSORLG00000022704	-	78	37.821
ENSORLG00000024765	-	52	42.208	ENSORLG00000027982	-	99	42.208
ENSORLG00000024765	-	52	39.773	ENSORLG00000016981	-	92	39.773
ENSORLG00000024765	-	52	38.043	ENSORLG00000022677	-	75	40.659
ENSORLG00000024765	-	59	41.912	ENSORLG00000024652	-	96	42.945
ENSORLG00000024765	-	58	40.761	ENSORLG00000029172	-	76	43.293
ENSORLG00000024765	-	56	37.931	ENSORLG00000029814	-	88	37.931
ENSORLG00000024765	-	59	33.704	ENSORLG00000023094	-	67	41.935
ENSORLG00000024765	-	58	35.323	ENSORLG00000028433	-	99	40.909
ENSORLG00000024765	-	56	46.795	ENSORLG00000007032	-	94	43.243
ENSORLG00000024765	-	58	40.000	ENSORLG00000022699	-	86	38.994
ENSORLG00000024765	-	52	46.622	ENSORLG00000007009	-	90	46.000
ENSORLG00000024765	-	88	75.926	ENSORLG00000013827	sall1a	63	63.855

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024765	-	99	85.185	ENSAOCG00000012779	sall3b	50	64.634	Amphiprion_ocellaris
ENSORLG00000024765	-	99	83.333	ENSATEG00000024524	sall3a	58	83.333	Anabas_testudineus
ENSORLG00000024765	-	93	79.630	ENSACAG00000000478	SALL3	51	79.630	Anolis_carolinensis
ENSORLG00000024765	-	53	65.772	ENSCAFG00020015092	SALL3	53	63.830	Canis_lupus_dingo
ENSORLG00000024765	-	92	79.630	ENSCPBG00000003657	SALL3	53	63.462	Chrysemys_picta_bellii
ENSORLG00000024765	-	88	79.630	ENSCGRG00001018203	Sall3	52	63.462	Cricetulus_griseus_chok1gshd
ENSORLG00000024765	-	54	81.481	ENSCSEG00000009058	sall3a	60	81.481	Cynoglossus_semilaevis
ENSORLG00000024765	-	98	90.196	ENSCVAG00000017005	sall3b	65	88.235	Cyprinodon_variegatus
ENSORLG00000024765	-	73	82.353	ENSDNOG00000025483	SALL3	63	64.286	Dasypus_novemcinctus
ENSORLG00000024765	-	97	83.333	ENSELUG00000020351	sall3a	50	83.333	Esox_lucius
ENSORLG00000024765	-	65	82.353	ENSFCAG00000028839	SALL3	51	82.353	Felis_catus
ENSORLG00000024765	-	65	83.333	ENSGMOG00000006649	sall3a	53	83.333	Gadus_morhua
ENSORLG00000024765	-	92	79.630	ENSGALG00000041404	SALL3	55	63.462	Gallus_gallus
ENSORLG00000024765	-	99	87.037	ENSGAFG00000014435	-	51	87.037	Gambusia_affinis
ENSORLG00000024765	-	99	88.889	ENSHCOG00000004745	sall3b	50	88.889	Hippocampus_comes
ENSORLG00000024765	-	97	63.462	ENSLAFG00000013521	SALL3	55	63.462	Loxodonta_africana
ENSORLG00000024765	-	55	82.353	ENSMICG00000017395	SALL3	55	64.286	Microcebus_murinus
ENSORLG00000024765	-	55	87.037	ENSMALG00000015200	sall3b	52	87.037	Monopterus_albus
ENSORLG00000024765	-	88	75.926	ENSOCUG00000004364	-	60	63.095	Oryctolagus_cuniculus
ENSORLG00000024765	-	87	82.353	ENSOCUG00000029398	SALL3	55	82.353	Oryctolagus_cuniculus
ENSORLG00000024765	-	99	90.741	ENSORLG00015005877	sall3b	95	91.284	Oryzias_latipes_hsok
ENSORLG00000024765	-	63	83.333	ENSOMEG00000011390	sall3a	52	83.333	Oryzias_melastigma
ENSORLG00000024765	-	88	63.462	ENSOGAG00000031681	SALL3	50	63.462	Otolemur_garnettii
ENSORLG00000024765	-	93	79.630	ENSPCIG00000002472	SALL3	50	63.462	Phascolarctos_cinereus
ENSORLG00000024765	-	88	63.462	ENSRNOG00000026116	Sall3	58	63.462	Rattus_norvegicus
ENSORLG00000024765	-	95	63.462	ENSSSCG00000004858	SALL3	58	63.462	Sus_scrofa
ENSORLG00000024765	-	98	88.462	ENSTRUG00000003369	sall3b	61	88.462	Takifugu_rubripes
ENSORLG00000024765	-	95	87.037	ENSXCOG00000018799	sall3b	56	87.037	Xiphophorus_couchianus
ENSORLG00000024765	-	98	90.196	ENSXMAG00000000798	sall3b	51	90.196	Xiphophorus_maculatus