EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000024845 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3945 bases
Position: chr4:15182398-15186342
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000034014	RVT_1	PF00078.27	2.5e-42	1	1
ENSORLP00000034014	Exo_endo_phos	PF03372.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000041953	-	3945	-	ENSORLP00000034014	1314 (aa)	-	-

Gene Model

Click here to download ENSORLG00000024845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000024845	-	84	43.024	ENSORLG00000024114	-	99	43.024
ENSORLG00000024845	-	70	99.027	ENSORLG00000023632	-	100	99.027
ENSORLG00000024845	-	88	99.219	ENSORLG00000027187	-	100	99.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024845	-	99	41.622	ENSATEG00000021554	-	98	41.827	Anabas_testudineus
ENSORLG00000024845	-	81	48.835	ENSAMXG00000037575	-	97	48.868	Astyanax_mexicanus
ENSORLG00000024845	-	99	49.429	ENSDARG00000100303	CU638714.1	98	49.538	Danio_rerio
ENSORLG00000024845	-	99	40.061	ENSDARG00000101795	CABZ01033394.1	98	40.354	Danio_rerio
ENSORLG00000024845	-	98	41.249	ENSDARG00000098779	BX547930.4	98	41.249	Danio_rerio
ENSORLG00000024845	-	99	40.075	ENSDARG00000105157	BX649434.3	97	40.323	Danio_rerio
ENSORLG00000024845	-	97	38.251	ENSGMOG00000001470	-	98	38.251	Gadus_morhua
ENSORLG00000024845	-	99	39.530	ENSGACG00000000122	-	97	39.646	Gasterosteus_aculeatus
ENSORLG00000024845	-	67	44.621	ENSKMAG00000017599	-	97	45.012	Kryptolebias_marmoratus
ENSORLG00000024845	-	99	54.476	ENSLBEG00000012182	-	98	55.127	Labrus_bergylta
ENSORLG00000024845	-	76	55.731	ENSLBEG00000008569	-	96	56.609	Labrus_bergylta
ENSORLG00000024845	-	74	41.296	ENSLBEG00000008622	-	99	41.296	Labrus_bergylta
ENSORLG00000024845	-	58	55.802	ENSLBEG00000022930	-	93	55.802	Labrus_bergylta
ENSORLG00000024845	-	99	54.476	ENSLBEG00000007968	-	98	55.127	Labrus_bergylta
ENSORLG00000024845	-	86	40.628	ENSLBEG00000029018	-	99	40.628	Labrus_bergylta
ENSORLG00000024845	-	99	54.476	ENSLBEG00000008483	-	98	55.127	Labrus_bergylta
ENSORLG00000024845	-	99	54.476	ENSLBEG00000007872	-	98	55.050	Labrus_bergylta
ENSORLG00000024845	-	100	96.804	ENSORLG00020022348	-	100	96.804	Oryzias_latipes_hni
ENSORLG00000024845	-	99	51.300	ENSOMEG00000013951	-	97	51.473	Oryzias_melastigma
ENSORLG00000024845	-	98	39.878	ENSSDUG00000006191	-	98	40.185	Seriola_dumerili
ENSORLG00000024845	-	99	40.549	ENSXMAG00000025449	-	97	40.726	Xiphophorus_maculatus
ENSORLG00000024845	-	98	41.263	ENSXMAG00000028545	-	99	41.339	Xiphophorus_maculatus
ENSORLG00000024845	-	99	40.625	ENSXMAG00000024932	-	97	40.804	Xiphophorus_maculatus
ENSORLG00000024845	-	97	41.385	ENSXMAG00000028372	-	98	41.810	Xiphophorus_maculatus