EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000024887 (Gene tree)
Gene ID: 101155501
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5577 bases
Position: chr10:4692823-4698399
Accession: 101155501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040501	SLBP_RNA_bind	PF15247.6	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040600	-	2312	XM_004086508	ENSORLP00000040501	268 (aa)	XP_004086556	UPI0002A4A94F

Gene Model

Click here to download ENSORLG00000024887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024887	-	89	49.791	ENSG00000163950	SLBP	82	54.808	Homo_sapiens
ENSORLG00000024887	-	100	63.958	ENSAPOG00000004953	slbp	100	63.958	Acanthochromis_polyacanthus
ENSORLG00000024887	-	75	50.732	ENSAMEG00000016915	SLBP	89	55.072	Ailuropoda_melanoleuca
ENSORLG00000024887	-	89	68.699	ENSACIG00000022308	slbp	94	68.699	Amphilophus_citrinellus
ENSORLG00000024887	-	100	63.251	ENSAOCG00000024545	slbp	100	63.251	Amphiprion_ocellaris
ENSORLG00000024887	-	100	63.604	ENSAPEG00000017629	slbp	100	63.604	Amphiprion_percula
ENSORLG00000024887	-	100	63.732	ENSATEG00000016358	slbp	100	63.732	Anabas_testudineus
ENSORLG00000024887	-	76	48.544	ENSAPLG00000015989	-	90	51.707	Anas_platyrhynchos
ENSORLG00000024887	-	89	47.561	ENSANAG00000034769	SLBP	87	53.881	Aotus_nancymaae
ENSORLG00000024887	-	90	65.370	ENSACLG00000007036	-	92	64.591	Astatotilapia_calliptera
ENSORLG00000024887	-	95	55.431	ENSAMXG00000014527	slbp	97	55.431	Astyanax_mexicanus
ENSORLG00000024887	-	74	53.535	ENSBTAG00000001328	SLBP	84	51.639	Bos_taurus
ENSORLG00000024887	-	89	49.372	ENSCJAG00000001790	SLBP	84	50.800	Callithrix_jacchus
ENSORLG00000024887	-	74	54.040	ENSCAFG00000015016	SLBP	71	57.426	Canis_familiaris
ENSORLG00000024887	-	74	54.040	ENSCAFG00020012334	SLBP	71	57.426	Canis_lupus_dingo
ENSORLG00000024887	-	77	52.885	ENSCHIG00000019364	SLBP	88	51.181	Capra_hircus
ENSORLG00000024887	-	89	49.372	ENSTSYG00000000376	SLBP	89	52.915	Carlito_syrichta
ENSORLG00000024887	-	61	49.390	ENSCAPG00000016340	SLBP	87	53.571	Cavia_aperea
ENSORLG00000024887	-	79	50.926	ENSCPOG00000000031	SLBP	82	52.675	Cavia_porcellus
ENSORLG00000024887	-	89	49.791	ENSCATG00000029173	SLBP	82	54.808	Cercocebus_atys
ENSORLG00000024887	-	78	49.057	ENSCLAG00000008157	SLBP	84	51.240	Chinchilla_lanigera
ENSORLG00000024887	-	88	37.815	ENSCSAG00000015628	SLBP	83	40.909	Chlorocebus_sabaeus
ENSORLG00000024887	-	88	49.174	ENSCPBG00000000746	SLBP	84	49.174	Chrysemys_picta_bellii
ENSORLG00000024887	-	75	51.485	ENSCANG00000041008	SLBP	89	54.369	Colobus_angolensis_palliatus
ENSORLG00000024887	-	91	46.748	ENSCGRG00001012991	-	88	50.000	Cricetulus_griseus_chok1gshd
ENSORLG00000024887	-	88	48.319	ENSCGRG00001009760	-	84	51.440	Cricetulus_griseus_chok1gshd
ENSORLG00000024887	-	88	48.319	ENSCGRG00000004506	Slbp	84	51.440	Cricetulus_griseus_crigri
ENSORLG00000024887	-	99	63.869	ENSCSEG00000020337	-	99	63.869	Cynoglossus_semilaevis
ENSORLG00000024887	-	93	68.872	ENSCVAG00000019592	-	95	68.627	Cyprinodon_variegatus
ENSORLG00000024887	-	90	55.777	ENSDARG00000100558	slbp	84	55.469	Danio_rerio
ENSORLG00000024887	-	74	52.427	ENSDNOG00000047539	SLBP	73	55.714	Dasypus_novemcinctus
ENSORLG00000024887	-	60	55.556	ENSDORG00000003028	Slbp	90	62.745	Dipodomys_ordii
ENSORLG00000024887	-	77	50.917	ENSETEG00000004641	SLBP	90	53.333	Echinops_telfairi
ENSORLG00000024887	-	50	57.778	ENSEASG00005022714	SLBP	91	51.351	Equus_asinus_asinus
ENSORLG00000024887	-	69	56.757	ENSECAG00000011689	SLBP	59	60.317	Equus_caballus
ENSORLG00000024887	-	94	54.682	ENSELUG00000012854	slbp	94	57.303	Esox_lucius
ENSORLG00000024887	-	80	52.315	ENSFCAG00000000169	SLBP	83	54.762	Felis_catus
ENSORLG00000024887	-	91	47.177	ENSFALG00000010003	-	87	47.177	Ficedula_albicollis
ENSORLG00000024887	-	75	54.726	ENSFDAG00000007592	SLBP	91	52.245	Fukomys_damarensis
ENSORLG00000024887	-	89	69.231	ENSFHEG00000007497	slbp	92	68.826	Fundulus_heteroclitus
ENSORLG00000024887	-	56	70.130	ENSGMOG00000015352	slbp	98	68.153	Gadus_morhua
ENSORLG00000024887	-	89	49.180	ENSGALG00000015712	SLBP	86	48.770	Gallus_gallus
ENSORLG00000024887	-	96	66.792	ENSGAFG00000019577	slbp	100	67.442	Gambusia_affinis
ENSORLG00000024887	-	91	60.800	ENSGACG00000019596	slbp	94	60.800	Gasterosteus_aculeatus
ENSORLG00000024887	-	74	55.172	ENSGAGG00000012096	SLBP	81	55.172	Gopherus_agassizii
ENSORLG00000024887	-	89	49.791	ENSGGOG00000003167	SLBP	82	54.808	Gorilla_gorilla
ENSORLG00000024887	-	90	65.759	ENSHBUG00000003338	-	92	64.981	Haplochromis_burtoni
ENSORLG00000024887	-	62	53.488	ENSHGLG00000010461	-	86	45.339	Heterocephalus_glaber_female
ENSORLG00000024887	-	64	50.568	ENSHGLG00000008313	-	86	44.538	Heterocephalus_glaber_female
ENSORLG00000024887	-	62	53.488	ENSHGLG00100014906	-	86	45.339	Heterocephalus_glaber_male
ENSORLG00000024887	-	64	51.705	ENSHGLG00100010510	-	86	45.378	Heterocephalus_glaber_male
ENSORLG00000024887	-	73	55.612	ENSHGLG00100014018	-	90	60.526	Heterocephalus_glaber_male
ENSORLG00000024887	-	100	61.314	ENSHCOG00000013425	slbp	100	61.314	Hippocampus_comes
ENSORLG00000024887	-	79	59.722	ENSIPUG00000016780	slbp	82	58.904	Ictalurus_punctatus
ENSORLG00000024887	-	80	52.778	ENSSTOG00000003262	SLBP	88	50.391	Ictidomys_tridecemlineatus
ENSORLG00000024887	-	77	53.589	ENSJJAG00000002394	-	83	51.029	Jaculus_jaculus
ENSORLG00000024887	-	88	49.160	ENSJJAG00000020549	-	84	51.852	Jaculus_jaculus
ENSORLG00000024887	-	100	64.769	ENSKMAG00000008187	slbp	100	64.769	Kryptolebias_marmoratus
ENSORLG00000024887	-	98	65.568	ENSLBEG00000024709	slbp	99	65.568	Labrus_bergylta
ENSORLG00000024887	-	93	46.992	ENSLACG00000014623	SLBP	89	48.221	Latimeria_chalumnae
ENSORLG00000024887	-	97	53.763	ENSLOCG00000011027	slbp	88	55.303	Lepisosteus_oculatus
ENSORLG00000024887	-	72	55.385	ENSLAFG00000012933	SLBP	83	57.488	Loxodonta_africana
ENSORLG00000024887	-	88	49.789	ENSMFAG00000030130	SLBP	73	52.479	Macaca_fascicularis
ENSORLG00000024887	-	89	48.374	ENSMMUG00000032303	SLBP	86	54.545	Macaca_mulatta
ENSORLG00000024887	-	53	46.980	ENSMNEG00000008082	SLBP	64	51.634	Macaca_nemestrina
ENSORLG00000024887	-	76	51.220	ENSMLEG00000024639	SLBP	78	54.545	Mandrillus_leucophaeus
ENSORLG00000024887	-	98	60.507	ENSMAMG00000001046	-	98	60.507	Mastacembelus_armatus
ENSORLG00000024887	-	90	65.759	ENSMZEG00005017261	-	92	64.981	Maylandia_zebra
ENSORLG00000024887	-	76	51.232	ENSMGAG00000013085	SLBP	90	51.232	Meleagris_gallopavo
ENSORLG00000024887	-	89	47.699	ENSMAUG00000009490	Slbp	84	51.029	Mesocricetus_auratus
ENSORLG00000024887	-	76	50.980	ENSMICG00000014244	SLBP	82	54.327	Microcebus_murinus
ENSORLG00000024887	-	74	54.040	ENSMOCG00000015826	Slbp	85	59.788	Microtus_ochrogaster
ENSORLG00000024887	-	92	60.729	ENSMMOG00000010181	slbp	95	60.729	Mola_mola
ENSORLG00000024887	-	91	47.012	ENSMODG00000004304	SLBP	92	50.787	Monodelphis_domestica
ENSORLG00000024887	-	99	61.972	ENSMALG00000013883	-	74	61.972	Monopterus_albus
ENSORLG00000024887	-	89	48.750	MGP_CAROLIEiJ_G0027117	Slbp	82	59.788	Mus_caroli
ENSORLG00000024887	-	88	48.739	ENSMUSG00000004642	Slbp	83	59.788	Mus_musculus
ENSORLG00000024887	-	88	48.739	MGP_PahariEiJ_G0016901	Slbp	82	59.788	Mus_pahari
ENSORLG00000024887	-	88	48.739	MGP_SPRETEiJ_G0028113	Slbp	83	59.788	Mus_spretus
ENSORLG00000024887	-	62	52.096	ENSMPUG00000011139	SLBP	83	56.140	Mustela_putorius_furo
ENSORLG00000024887	-	61	60.976	ENSMLUG00000004425	SLBP	84	55.072	Myotis_lucifugus
ENSORLG00000024887	-	74	52.525	ENSNGAG00000020799	Slbp	83	50.413	Nannospalax_galili
ENSORLG00000024887	-	81	66.522	ENSNBRG00000006044	-	87	66.522	Neolamprologus_brichardi
ENSORLG00000024887	-	89	48.374	ENSNLEG00000000048	SLBP	82	54.808	Nomascus_leucogenys
ENSORLG00000024887	-	62	56.287	ENSMEUG00000002501	SLBP	91	59.884	Notamacropus_eugenii
ENSORLG00000024887	-	75	52.970	ENSODEG00000012641	SLBP	86	51.440	Octodon_degus
ENSORLG00000024887	-	96	64.727	ENSONIG00000017469	-	97	64.727	Oreochromis_niloticus
ENSORLG00000024887	-	76	52.941	ENSOANG00000014243	SLBP	85	52.941	Ornithorhynchus_anatinus
ENSORLG00000024887	-	100	95.522	ENSORLG00020007798	slbp	100	95.522	Oryzias_latipes_hni
ENSORLG00000024887	-	100	96.642	ENSORLG00015016656	slbp	100	96.642	Oryzias_latipes_hsok
ENSORLG00000024887	-	100	90.299	ENSOMEG00000010818	slbp	100	90.299	Oryzias_melastigma
ENSORLG00000024887	-	89	49.372	ENSOGAG00000009750	SLBP	83	52.263	Otolemur_garnettii
ENSORLG00000024887	-	60	57.669	ENSOARG00000016090	SLBP	90	54.545	Ovis_aries
ENSORLG00000024887	-	89	49.372	ENSPPAG00000033300	SLBP	88	49.091	Pan_paniscus
ENSORLG00000024887	-	62	58.434	ENSPPRG00000016897	SLBP	92	52.066	Panthera_pardus
ENSORLG00000024887	-	50	58.519	ENSPTIG00000015057	SLBP	89	54.144	Panthera_tigris_altaica
ENSORLG00000024887	-	88	49.367	ENSPTRG00000015832	SLBP	82	54.808	Pan_troglodytes
ENSORLG00000024887	-	88	47.755	ENSPANG00000004932	SLBP	82	54.808	Papio_anubis
ENSORLG00000024887	-	97	53.506	ENSPKIG00000006183	slbp	94	54.579	Paramormyrops_kingsleyae
ENSORLG00000024887	-	87	60.851	ENSPMGG00000017684	-	99	64.000	Periophthalmus_magnuspinnatus
ENSORLG00000024887	-	74	54.040	ENSPEMG00000018369	Slbp	83	51.653	Peromyscus_maniculatus_bairdii
ENSORLG00000024887	-	74	51.174	ENSPCIG00000013575	SLBP	72	49.049	Phascolarctos_cinereus
ENSORLG00000024887	-	96	66.415	ENSPFOG00000000462	slbp	97	66.415	Poecilia_formosa
ENSORLG00000024887	-	96	66.541	ENSPLAG00000008300	slbp	98	66.016	Poecilia_latipinna
ENSORLG00000024887	-	96	66.415	ENSPMEG00000020807	slbp	97	66.415	Poecilia_mexicana
ENSORLG00000024887	-	96	66.792	ENSPREG00000004561	slbp	97	66.792	Poecilia_reticulata
ENSORLG00000024887	-	89	49.791	ENSPPYG00000014529	SLBP	83	52.675	Pongo_abelii
ENSORLG00000024887	-	88	49.160	ENSPCOG00000017399	SLBP	82	54.808	Propithecus_coquereli
ENSORLG00000024887	-	89	48.750	ENSPVAG00000002807	SLBP	83	51.429	Pteropus_vampyrus
ENSORLG00000024887	-	90	65.759	ENSPNYG00000005451	-	92	64.981	Pundamilia_nyererei
ENSORLG00000024887	-	91	55.159	ENSPNAG00000018503	slbp	92	55.159	Pygocentrus_nattereri
ENSORLG00000024887	-	88	48.739	ENSRNOG00000037162	Slbp	83	51.653	Rattus_norvegicus
ENSORLG00000024887	-	89	49.791	ENSRBIG00000039159	SLBP	82	54.808	Rhinopithecus_bieti
ENSORLG00000024887	-	88	50.000	ENSRROG00000030081	SLBP	85	52.675	Rhinopithecus_roxellana
ENSORLG00000024887	-	66	50.282	ENSSBOG00000033897	SLBP	89	53.591	Saimiri_boliviensis_boliviensis
ENSORLG00000024887	-	74	51.174	ENSSHAG00000013939	SLBP	84	49.049	Sarcophilus_harrisii
ENSORLG00000024887	-	97	55.351	ENSSFOG00015019429	slbp	98	55.351	Scleropages_formosus
ENSORLG00000024887	-	100	61.268	ENSSMAG00000016028	-	100	61.268	Scophthalmus_maximus
ENSORLG00000024887	-	96	66.171	ENSSDUG00000000855	-	97	66.171	Seriola_dumerili
ENSORLG00000024887	-	91	51.394	ENSSLDG00000007554	-	79	51.200	Seriola_lalandi_dorsalis
ENSORLG00000024887	-	53	71.233	ENSSLDG00000022893	-	87	71.233	Seriola_lalandi_dorsalis
ENSORLG00000024887	-	89	49.583	ENSSPUG00000016007	SLBP	88	53.279	Sphenodon_punctatus
ENSORLG00000024887	-	99	65.704	ENSSPAG00000004021	slbp	100	66.667	Stegastes_partitus
ENSORLG00000024887	-	74	53.535	ENSSSCG00000008676	SLBP	71	56.931	Sus_scrofa
ENSORLG00000024887	-	89	49.794	ENSTGUG00000010626	-	92	49.393	Taeniopygia_guttata
ENSORLG00000024887	-	98	64.945	ENSTRUG00000000688	slbp	98	64.945	Takifugu_rubripes
ENSORLG00000024887	-	88	63.374	ENSTNIG00000000484	-	96	63.374	Tetraodon_nigroviridis
ENSORLG00000024887	-	59	59.375	ENSTTRG00000010901	-	92	54.245	Tursiops_truncatus
ENSORLG00000024887	-	59	59.146	ENSTTRG00000004010	-	89	58.434	Tursiops_truncatus
ENSORLG00000024887	-	75	55.172	ENSUAMG00000012990	SLBP	82	52.697	Ursus_americanus
ENSORLG00000024887	-	74	54.040	ENSVVUG00000015578	-	71	57.426	Vulpes_vulpes
ENSORLG00000024887	-	96	48.092	ENSXETG00000003876	slbp	92	48.837	Xenopus_tropicalis
ENSORLG00000024887	-	94	66.409	ENSXCOG00000008275	slbp	100	66.409	Xiphophorus_couchianus
ENSORLG00000024887	-	96	66.415	ENSXMAG00000001331	-	97	65.918	Xiphophorus_maculatus