EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000024893 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4371 bases
Position: chr1:23266162-23270532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029956	CAF1	PF04857.20	9.4e-37	1	1
ENSORLP00000045838	CAF1	PF04857.20	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043607	-	609	-	ENSORLP00000029956	202 (aa)	-	-
ENSORLT00000028449	-	237	-	ENSORLP00000045838	78 (aa)	-	-

Gene Model

Click here to download ENSORLG00000024893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000024893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000024893	-	100	73.529	ENSG00000140694	PARN	100	76.923	Homo_sapiens
ENSORLG00000024893	-	100	86.700	ENSAPOG00000019730	-	100	86.700	Acanthochromis_polyacanthus
ENSORLG00000024893	-	100	69.091	ENSACIG00000000619	parn	76	83.607	Amphilophus_citrinellus
ENSORLG00000024893	-	100	68.778	ENSANAG00000031516	PARN	100	76.923	Aotus_nancymaae
ENSORLG00000024893	-	100	68.326	ENSCJAG00000015866	PARN	100	76.923	Callithrix_jacchus
ENSORLG00000024893	-	100	68.326	ENSCCAG00000030367	PARN	100	76.923	Cebus_capucinus
ENSORLG00000024893	-	100	69.118	ENSCANG00000023734	-	100	69.118	Colobus_angolensis_palliatus
ENSORLG00000024893	-	100	79.310	ENSCSEG00000002064	parn	100	79.310	Cynoglossus_semilaevis
ENSORLG00000024893	-	100	65.297	ENSDARG00000102634	parn	77	80.000	Danio_rerio
ENSORLG00000024893	-	100	71.569	ENSDORG00000027812	-	100	71.569	Dipodomys_ordii
ENSORLG00000024893	-	100	71.889	ENSFHEG00000013738	parn	100	85.938	Fundulus_heteroclitus
ENSORLG00000024893	-	100	67.421	ENSGGOG00000025224	PARN	100	76.923	Gorilla_gorilla
ENSORLG00000024893	-	100	59.459	ENSLACG00000004207	PARN	52	59.459	Latimeria_chalumnae
ENSORLG00000024893	-	57	30.709	ENSMICG00000032375	-	52	30.709	Microcebus_murinus
ENSORLG00000024893	-	100	66.968	ENSMICG00000016053	PARN	100	75.385	Microcebus_murinus
ENSORLG00000024893	-	62	30.282	ENSMUSG00000073460	Pnldc1	66	30.370	Mus_musculus
ENSORLG00000024893	-	100	63.636	ENSMUSG00000022685	Parn	100	76.829	Mus_musculus
ENSORLG00000024893	-	100	71.921	ENSNGAG00000024082	-	100	71.921	Nannospalax_galili
ENSORLG00000024893	-	100	67.873	ENSNLEG00000010241	PARN	100	76.923	Nomascus_leucogenys
ENSORLG00000024893	-	70	60.000	ENSOANG00000029996	-	74	60.000	Ornithorhynchus_anatinus
ENSORLG00000024893	-	100	95.545	ENSOMEG00000019555	parn	97	95.545	Oryzias_melastigma
ENSORLG00000024893	-	57	32.283	ENSOGAG00000002298	-	56	32.283	Otolemur_garnettii
ENSORLG00000024893	-	100	67.873	ENSPPAG00000031438	PARN	100	76.923	Pan_paniscus
ENSORLG00000024893	-	100	67.421	ENSPTRG00000007792	PARN	100	76.923	Pan_troglodytes
ENSORLG00000024893	-	99	61.818	ENSPCIG00000001259	PARN	100	76.923	Phascolarctos_cinereus
ENSORLG00000024893	-	100	66.516	ENSPCOG00000019292	PARN	100	75.385	Propithecus_coquereli
ENSORLG00000024893	-	100	64.091	ENSRNOG00000002912	Parn	96	65.306	Rattus_norvegicus
ENSORLG00000024893	-	76	79.661	ENSRROG00000020116	-	86	78.689	Rhinopithecus_roxellana
ENSORLG00000024893	-	100	79.208	ENSSLDG00000007603	-	100	79.208	Seriola_lalandi_dorsalis
ENSORLG00000024893	-	86	74.627	ENSTRUG00000015208	-	96	74.627	Takifugu_rubripes