EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025015 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 2979 bases
Position: chr16:6944160-6947138
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000031192	RRM_1	PF00076.22	7e-32	1	2
ENSORLP00000031192	RRM_1	PF00076.22	7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000031474	-	903	-	ENSORLP00000031192	300 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025015	-	58	35.417	ENSORLG00000001833	hnrnpd	75	35.417
ENSORLG00000025015	-	59	31.818	ENSORLG00000026044	hnrnpabb	76	38.889
ENSORLG00000025015	-	66	67.513	ENSORLG00000023176	-	65	67.513
ENSORLG00000025015	-	81	30.682	ENSORLG00000019978	-	61	30.682
ENSORLG00000025015	-	100	100.000	ENSORLG00000025332	-	100	100.000
ENSORLG00000025015	-	60	69.565	ENSORLG00000027074	-	81	69.565
ENSORLG00000025015	-	59	49.727	ENSORLG00000017561	hnrnpa3	56	48.947
ENSORLG00000025015	-	84	30.682	ENSORLG00000029593	MSI1	65	32.093
ENSORLG00000025015	-	58	30.928	ENSORLG00000003593	tardbp	58	30.928
ENSORLG00000025015	-	66	68.041	ENSORLG00000024157	-	68	68.041
ENSORLG00000025015	-	73	91.964	ENSORLG00000029240	-	100	91.964
ENSORLG00000025015	-	66	67.005	ENSORLG00000023542	-	67	68.041
ENSORLG00000025015	-	59	33.529	ENSORLG00000009671	msi2a	55	33.529
ENSORLG00000025015	-	58	35.644	ENSORLG00000005327	hnrnpaba	65	35.644
ENSORLG00000025015	-	66	52.809	ENSORLG00000008001	-	55	52.809
ENSORLG00000025015	-	100	99.000	ENSORLG00000030284	-	100	99.000
ENSORLG00000025015	-	58	69.318	ENSORLG00000026571	-	94	69.318
ENSORLG00000025015	-	54	30.435	ENSORLG00000005188	tardbpl	57	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025015	-	57	58.523	ENSG00000177733	HNRNPA0	93	45.070	Homo_sapiens
ENSORLG00000025015	-	60	50.267	ENSAPOG00000014678	-	55	50.267	Acanthochromis_polyacanthus
ENSORLG00000025015	-	66	69.118	ENSAPOG00000003387	HNRNPA0	71	69.118	Acanthochromis_polyacanthus
ENSORLG00000025015	-	67	51.948	ENSAPOG00000003641	hnrnpa3	82	45.662	Acanthochromis_polyacanthus
ENSORLG00000025015	-	59	60.656	ENSAPOG00000003364	HNRNPA0	61	60.215	Acanthochromis_polyacanthus
ENSORLG00000025015	-	60	50.267	ENSAPOG00000003688	hnrnpa3	53	50.267	Acanthochromis_polyacanthus
ENSORLG00000025015	-	57	58.192	ENSAMEG00000016316	HNRNPA0	69	52.804	Ailuropoda_melanoleuca
ENSORLG00000025015	-	56	51.471	ENSAMEG00000004293	-	58	49.306	Ailuropoda_melanoleuca
ENSORLG00000025015	-	66	68.932	ENSACIG00000021834	HNRNPA0	91	69.417	Amphilophus_citrinellus
ENSORLG00000025015	-	60	50.267	ENSAOCG00000004095	hnrnpa3	52	49.474	Amphiprion_ocellaris
ENSORLG00000025015	-	60	50.267	ENSAPEG00000022522	hnrnpa3	52	49.474	Amphiprion_percula
ENSORLG00000025015	-	58	61.111	ENSATEG00000003526	-	95	61.111	Anabas_testudineus
ENSORLG00000025015	-	60	49.733	ENSATEG00000015304	hnrnpa3	57	48.947	Anabas_testudineus
ENSORLG00000025015	-	57	58.192	ENSANAG00000017086	HNRNPA0	92	45.035	Aotus_nancymaae
ENSORLG00000025015	-	59	52.198	ENSANAG00000037918	-	51	50.820	Aotus_nancymaae
ENSORLG00000025015	-	66	62.312	ENSACLG00000008973	HNRNPA0	65	62.312	Astatotilapia_calliptera
ENSORLG00000025015	-	58	50.556	ENSACLG00000008532	hnrnpa3	55	49.727	Astatotilapia_calliptera
ENSORLG00000025015	-	60	51.351	ENSAMXG00000007065	hnrnpa3	54	50.254	Astyanax_mexicanus
ENSORLG00000025015	-	57	58.192	ENSBTAG00000016929	HNRNPA0	69	52.294	Bos_taurus
ENSORLG00000025015	-	59	51.099	ENSCJAG00000013830	-	50	50.273	Callithrix_jacchus
ENSORLG00000025015	-	57	58.192	ENSCJAG00000006112	HNRNPA0	72	51.598	Callithrix_jacchus
ENSORLG00000025015	-	57	58.523	ENSCAFG00000001132	HNRNPA0	93	43.945	Canis_familiaris
ENSORLG00000025015	-	57	58.523	ENSCAFG00020008142	HNRNPA0	93	43.945	Canis_lupus_dingo
ENSORLG00000025015	-	57	58.523	ENSCHIG00000002602	HNRNPA0	93	45.230	Capra_hircus
ENSORLG00000025015	-	57	57.865	ENSCPOG00000026092	HNRNPA0	73	52.055	Cavia_porcellus
ENSORLG00000025015	-	57	58.192	ENSCCAG00000010302	HNRNPA0	92	44.876	Cebus_capucinus
ENSORLG00000025015	-	57	58.523	ENSCATG00000021167	HNRNPA0	72	52.252	Cercocebus_atys
ENSORLG00000025015	-	57	58.192	ENSCLAG00000015132	HNRNPA0	76	51.152	Chinchilla_lanigera
ENSORLG00000025015	-	57	58.523	ENSCSAG00000000499	HNRNPA0	72	52.055	Chlorocebus_sabaeus
ENSORLG00000025015	-	57	58.757	ENSCPBG00000008738	HNRNPA0	66	53.922	Chrysemys_picta_bellii
ENSORLG00000025015	-	57	58.523	ENSCANG00000038062	HNRNPA0	72	52.252	Colobus_angolensis_palliatus
ENSORLG00000025015	-	57	57.865	ENSCGRG00001005548	Hnrnpa0	67	53.659	Cricetulus_griseus_chok1gshd
ENSORLG00000025015	-	61	41.489	ENSCGRG00001010070	-	60	40.957	Cricetulus_griseus_chok1gshd
ENSORLG00000025015	-	61	41.489	ENSCGRG00000007592	-	59	40.957	Cricetulus_griseus_crigri
ENSORLG00000025015	-	56	51.149	ENSCGRG00000003686	-	64	49.724	Cricetulus_griseus_crigri
ENSORLG00000025015	-	61	48.691	ENSCVAG00000018995	hnrnpa3	56	47.938	Cyprinodon_variegatus
ENSORLG00000025015	-	60	50.811	ENSDARG00000059351	hnrnpa3	80	49.495	Danio_rerio
ENSORLG00000025015	-	57	58.523	ENSDNOG00000030903	HNRNPA0	93	44.828	Dasypus_novemcinctus
ENSORLG00000025015	-	56	53.143	ENSDNOG00000031964	-	57	51.366	Dasypus_novemcinctus
ENSORLG00000025015	-	56	42.857	ENSETEG00000007747	-	61	42.045	Echinops_telfairi
ENSORLG00000025015	-	58	48.889	ENSEBUG00000009297	HNRNPA0	52	48.889	Eptatretus_burgeri
ENSORLG00000025015	-	56	48.837	ENSEBUG00000016570	HNRNPA0	62	45.238	Eptatretus_burgeri
ENSORLG00000025015	-	57	58.523	ENSECAG00000032164	HNRNPA0	93	44.948	Equus_caballus
ENSORLG00000025015	-	61	50.802	ENSELUG00000023080	hnrnpa3	73	48.780	Esox_lucius
ENSORLG00000025015	-	57	58.523	ENSFCAG00000040261	HNRNPA0	93	44.561	Felis_catus
ENSORLG00000025015	-	60	56.383	ENSFALG00000014395	HNRNPA0	58	54.315	Ficedula_albicollis
ENSORLG00000025015	-	56	43.605	ENSFDAG00000018739	-	62	43.353	Fukomys_damarensis
ENSORLG00000025015	-	57	57.865	ENSFDAG00000019780	HNRNPA0	84	52.055	Fukomys_damarensis
ENSORLG00000025015	-	59	44.382	ENSFDAG00000014067	-	54	42.373	Fukomys_damarensis
ENSORLG00000025015	-	61	70.186	ENSFHEG00000008384	HNRNPA0	81	70.186	Fundulus_heteroclitus
ENSORLG00000025015	-	58	58.889	ENSFHEG00000008390	HNRNPA0	56	57.068	Fundulus_heteroclitus
ENSORLG00000025015	-	61	60.847	ENSGMOG00000016232	HNRNPA0	74	57.277	Gadus_morhua
ENSORLG00000025015	-	60	56.452	ENSGALG00000006160	HNRNPA0	66	54.187	Gallus_gallus
ENSORLG00000025015	-	64	47.236	ENSGACG00000004477	hnrnpa3	70	46.667	Gasterosteus_aculeatus
ENSORLG00000025015	-	57	58.757	ENSGAGG00000005632	HNRNPA0	66	53.922	Gopherus_agassizii
ENSORLG00000025015	-	58	50.556	ENSHBUG00000019734	hnrnpa3	55	49.727	Haplochromis_burtoni
ENSORLG00000025015	-	78	58.498	ENSHBUG00000023868	HNRNPA0	98	58.498	Haplochromis_burtoni
ENSORLG00000025015	-	59	48.352	ENSHGLG00000014577	-	64	48.352	Heterocephalus_glaber_female
ENSORLG00000025015	-	57	57.865	ENSHGLG00000018216	HNRNPA0	73	52.294	Heterocephalus_glaber_female
ENSORLG00000025015	-	59	50.820	ENSHGLG00100001336	-	52	50.543	Heterocephalus_glaber_male
ENSORLG00000025015	-	59	52.198	ENSHGLG00100006677	-	51	52.198	Heterocephalus_glaber_male
ENSORLG00000025015	-	61	67.456	ENSHCOG00000007174	HNRNPA0	91	67.456	Hippocampus_comes
ENSORLG00000025015	-	59	52.717	ENSIPUG00000019815	RO32	59	50.495	Ictalurus_punctatus
ENSORLG00000025015	-	62	56.545	ENSJJAG00000006954	Hnrnpa0	92	45.455	Jaculus_jaculus
ENSORLG00000025015	-	60	48.663	ENSKMAG00000015973	hnrnpa3	56	47.895	Kryptolebias_marmoratus
ENSORLG00000025015	-	63	48.980	ENSLBEG00000016767	hnrnpa3	57	49.231	Labrus_bergylta
ENSORLG00000025015	-	59	53.005	ENSLACG00000008189	hnrnpa3	51	53.297	Latimeria_chalumnae
ENSORLG00000025015	-	61	56.545	ENSLACG00000014480	HNRNPA0	72	53.636	Latimeria_chalumnae
ENSORLG00000025015	-	59	51.630	ENSLOCG00000006986	hnrnpa3	55	50.254	Lepisosteus_oculatus
ENSORLG00000025015	-	55	54.110	ENSLAFG00000027712	-	52	50.625	Loxodonta_africana
ENSORLG00000025015	-	57	58.523	ENSMFAG00000030522	HNRNPA0	72	52.252	Macaca_fascicularis
ENSORLG00000025015	-	57	58.523	ENSMNEG00000015863	HNRNPA0	72	52.252	Macaca_nemestrina
ENSORLG00000025015	-	56	44.509	ENSMNEG00000038943	-	69	44.318	Macaca_nemestrina
ENSORLG00000025015	-	57	58.523	ENSMLEG00000026629	HNRNPA0	72	52.252	Mandrillus_leucophaeus
ENSORLG00000025015	-	66	69.118	ENSMAMG00000017754	HNRNPA0	80	69.118	Mastacembelus_armatus
ENSORLG00000025015	-	66	62.312	ENSMZEG00005001055	HNRNPA0	65	62.312	Maylandia_zebra
ENSORLG00000025015	-	58	50.556	ENSMZEG00005004663	hnrnpa3	55	49.727	Maylandia_zebra
ENSORLG00000025015	-	57	58.192	ENSMAUG00000018485	Hnrnpa0	62	55.615	Mesocricetus_auratus
ENSORLG00000025015	-	58	51.934	ENSMODG00000002463	-	96	51.934	Monodelphis_domestica
ENSORLG00000025015	-	59	57.297	ENSMODG00000014720	HNRNPA0	71	57.297	Monodelphis_domestica
ENSORLG00000025015	-	59	50.000	ENSMODG00000024570	-	52	48.936	Monodelphis_domestica
ENSORLG00000025015	-	64	47.739	ENSMALG00000009691	hnrnpa3	84	45.327	Monopterus_albus
ENSORLG00000025015	-	57	58.192	MGP_CAROLIEiJ_G0018593	Hnrnpa0	93	44.251	Mus_caroli
ENSORLG00000025015	-	57	58.523	ENSMUSG00000007836	Hnrnpa0	67	53.431	Mus_musculus
ENSORLG00000025015	-	57	58.192	MGP_PahariEiJ_G0019657	Hnrnpa0	93	44.755	Mus_pahari
ENSORLG00000025015	-	57	58.192	MGP_SPRETEiJ_G0019473	Hnrnpa0	68	53.398	Mus_spretus
ENSORLG00000025015	-	57	58.523	ENSMPUG00000019790	HNRNPA0	93	44.251	Mustela_putorius_furo
ENSORLG00000025015	-	57	58.523	ENSMLUG00000012683	-	93	45.172	Myotis_lucifugus
ENSORLG00000025015	-	57	56.818	ENSMLUG00000028644	-	66	50.909	Myotis_lucifugus
ENSORLG00000025015	-	57	58.523	ENSNGAG00000008883	Hnrnpa0	93	45.652	Nannospalax_galili
ENSORLG00000025015	-	59	52.747	ENSNLEG00000027151	-	52	52.459	Nomascus_leucogenys
ENSORLG00000025015	-	57	58.523	ENSNLEG00000008518	HNRNPA0	93	45.139	Nomascus_leucogenys
ENSORLG00000025015	-	57	58.523	ENSMEUG00000013675	HNRNPA0	92	44.523	Notamacropus_eugenii
ENSORLG00000025015	-	59	52.198	ENSODEG00000016578	-	57	52.747	Octodon_degus
ENSORLG00000025015	-	57	57.865	ENSODEG00000019566	HNRNPA0	73	51.818	Octodon_degus
ENSORLG00000025015	-	68	66.667	ENSORLG00020007505	-	67	66.667	Oryzias_latipes_hni
ENSORLG00000025015	-	88	78.519	ENSORLG00020022487	-	90	78.519	Oryzias_latipes_hni
ENSORLG00000025015	-	68	68.041	ENSORLG00020008203	-	65	68.041	Oryzias_latipes_hni
ENSORLG00000025015	-	68	68.041	ENSORLG00020007109	-	63	68.041	Oryzias_latipes_hni
ENSORLG00000025015	-	59	50.273	ENSORLG00020020788	hnrnpa3	56	49.474	Oryzias_latipes_hni
ENSORLG00000025015	-	70	65.842	ENSORLG00015016169	HNRNPA0	66	67.005	Oryzias_latipes_hsok
ENSORLG00000025015	-	68	69.192	ENSORLG00015016507	-	67	65.596	Oryzias_latipes_hsok
ENSORLG00000025015	-	67	61.692	ENSORLG00015016236	HNRNPA0	73	58.796	Oryzias_latipes_hsok
ENSORLG00000025015	-	59	58.242	ENSORLG00015016302	HNRNPA0	94	42.662	Oryzias_latipes_hsok
ENSORLG00000025015	-	70	65.842	ENSORLG00015016157	-	68	67.347	Oryzias_latipes_hsok
ENSORLG00000025015	-	69	63.679	ENSORLG00015017144	-	70	63.679	Oryzias_latipes_hsok
ENSORLG00000025015	-	66	68.182	ENSORLG00015015185	-	74	64.679	Oryzias_latipes_hsok
ENSORLG00000025015	-	68	68.657	ENSORLG00015015182	-	90	67.150	Oryzias_latipes_hsok
ENSORLG00000025015	-	59	49.727	ENSORLG00015014774	hnrnpa3	56	48.947	Oryzias_latipes_hsok
ENSORLG00000025015	-	60	49.468	ENSOMEG00000004838	hnrnpa3	57	48.947	Oryzias_melastigma
ENSORLG00000025015	-	57	58.192	ENSOGAG00000025754	HNRNPA0	76	57.222	Otolemur_garnettii
ENSORLG00000025015	-	57	58.523	ENSOARG00000015434	HNRNPA0	75	52.252	Ovis_aries
ENSORLG00000025015	-	57	58.523	ENSPPAG00000005303	HNRNPA0	93	45.139	Pan_paniscus
ENSORLG00000025015	-	57	58.523	ENSPPRG00000014655	HNRNPA0	93	43.945	Panthera_pardus
ENSORLG00000025015	-	57	58.523	ENSPTRG00000017273	HNRNPA0	93	45.139	Pan_troglodytes
ENSORLG00000025015	-	57	58.523	ENSPANG00000012900	HNRNPA0	72	52.252	Papio_anubis
ENSORLG00000025015	-	58	62.983	ENSPKIG00000020270	HNRNPA0	72	60.488	Paramormyrops_kingsleyae
ENSORLG00000025015	-	63	49.744	ENSPKIG00000022916	hnrnpa3	72	48.792	Paramormyrops_kingsleyae
ENSORLG00000025015	-	58	62.983	ENSPKIG00000020281	-	60	60.488	Paramormyrops_kingsleyae
ENSORLG00000025015	-	59	50.273	ENSPMGG00000000747	hnrnpa3	73	50.323	Periophthalmus_magnuspinnatus
ENSORLG00000025015	-	71	52.055	ENSPEMG00000020274	Hnrnpa0	85	52.055	Peromyscus_maniculatus_bairdii
ENSORLG00000025015	-	58	50.847	ENSPMAG00000004449	-	82	49.198	Petromyzon_marinus
ENSORLG00000025015	-	60	48.128	ENSPFOG00000014049	hnrnpa3	57	47.368	Poecilia_formosa
ENSORLG00000025015	-	57	58.960	ENSPLAG00000015223	-	64	55.051	Poecilia_latipinna
ENSORLG00000025015	-	60	48.128	ENSPMEG00000006390	hnrnpa3	57	47.368	Poecilia_mexicana
ENSORLG00000025015	-	59	67.213	ENSPMEG00000017025	HNRNPA0	99	67.213	Poecilia_mexicana
ENSORLG00000025015	-	61	47.644	ENSPREG00000005411	hnrnpa3	74	44.395	Poecilia_reticulata
ENSORLG00000025015	-	61	70.186	ENSPREG00000010619	HNRNPA0	76	70.186	Poecilia_reticulata
ENSORLG00000025015	-	57	58.523	ENSPPYG00000015814	HNRNPA0	93	45.070	Pongo_abelii
ENSORLG00000025015	-	57	51.572	ENSPPYG00000012967	-	67	50.909	Pongo_abelii
ENSORLG00000025015	-	56	53.714	ENSPPYG00000001012	-	59	52.198	Pongo_abelii
ENSORLG00000025015	-	69	52.326	ENSPNYG00000008424	hnrnpa3	83	49.010	Pundamilia_nyererei
ENSORLG00000025015	-	58	63.536	ENSPNAG00000023333	HNRNPA0	70	60.488	Pygocentrus_nattereri
ENSORLG00000025015	-	57	58.523	ENSRNOG00000039876	LOC681410	94	44.014	Rattus_norvegicus
ENSORLG00000025015	-	57	58.523	ENSRBIG00000023673	HNRNPA0	71	52.294	Rhinopithecus_bieti
ENSORLG00000025015	-	56	45.977	ENSRROG00000034643	-	51	45.977	Rhinopithecus_roxellana
ENSORLG00000025015	-	57	58.523	ENSRROG00000002558	HNRNPA0	71	52.294	Rhinopithecus_roxellana
ENSORLG00000025015	-	57	54.286	ENSSFOG00015016280	hnrnpa1	60	50.495	Scleropages_formosus
ENSORLG00000025015	-	59	51.087	ENSSFOG00015001814	hnrnpa3	52	50.000	Scleropages_formosus
ENSORLG00000025015	-	58	62.011	ENSSFOG00015002650	HNRNPA0	60	59.487	Scleropages_formosus
ENSORLG00000025015	-	60	49.198	ENSSDUG00000000381	hnrnpa3	62	46.377	Seriola_dumerili
ENSORLG00000025015	-	57	58.192	ENSSPUG00000016613	HNRNPA0	66	53.202	Sphenodon_punctatus
ENSORLG00000025015	-	63	49.231	ENSSPAG00000008969	hnrnpa3	57	49.231	Stegastes_partitus
ENSORLG00000025015	-	59	43.478	ENSSSCG00000040926	-	68	37.449	Sus_scrofa
ENSORLG00000025015	-	59	43.478	ENSSSCG00000033635	-	68	37.449	Sus_scrofa
ENSORLG00000025015	-	58	55.307	ENSTGUG00000001186	HNRNPA0	61	52.910	Taeniopygia_guttata
ENSORLG00000025015	-	58	55.249	ENSTRUG00000021494	-	69	51.942	Takifugu_rubripes
ENSORLG00000025015	-	62	48.352	ENSTRUG00000017504	hnrnpa3	56	48.352	Takifugu_rubripes
ENSORLG00000025015	-	61	49.721	ENSTNIG00000016958	hnrnpa3	58	48.901	Tetraodon_nigroviridis
ENSORLG00000025015	-	57	58.523	ENSTTRG00000000499	HNRNPA0	93	45.390	Tursiops_truncatus
ENSORLG00000025015	-	57	58.523	ENSVVUG00000014736	HNRNPA0	93	44.097	Vulpes_vulpes
ENSORLG00000025015	-	59	56.522	ENSXETG00000003833	hnrnpa0	66	53.659	Xenopus_tropicalis
ENSORLG00000025015	-	59	55.191	ENSXETG00000001806	hnrnpa3	51	53.571	Xenopus_tropicalis
ENSORLG00000025015	-	60	48.128	ENSXMAG00000000439	hnrnpa3	57	47.368	Xiphophorus_maculatus
ENSORLG00000025015	-	58	67.403	ENSXMAG00000019804	HNRNPA0	96	67.403	Xiphophorus_maculatus
ENSORLG00000025015	-	58	59.444	ENSXMAG00000029150	HNRNPA0	59	59.016	Xiphophorus_maculatus