EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025074 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7448 bases
Position: chr21:6092302-6099749
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000039839	zf-CCHC	PF00098.23	0.00054	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030780	-	2067	-	ENSORLP00000039839	688 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025074	-	89	65.147	ENSORLG00000028280	-	87	63.844
ENSORLG00000025074	-	79	56.831	ENSORLG00000004601	-	70	56.831
ENSORLG00000025074	-	90	37.816	ENSORLG00000024094	-	68	38.291
ENSORLG00000025074	-	90	62.742	ENSORLG00000027546	-	86	63.279
ENSORLG00000025074	-	62	63.785	ENSORLG00000024204	-	98	63.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025074	-	52	36.220	ENSAPOG00000012172	-	66	36.388	Acanthochromis_polyacanthus
ENSORLG00000025074	-	82	30.099	ENSACAG00000029367	-	78	30.783	Anolis_carolinensis
ENSORLG00000025074	-	92	38.889	ENSAMXG00000033831	-	81	38.889	Astyanax_mexicanus
ENSORLG00000025074	-	91	38.474	ENSAMXG00000043875	-	92	38.474	Astyanax_mexicanus
ENSORLG00000025074	-	88	36.971	ENSAMXG00000036897	-	84	36.609	Astyanax_mexicanus
ENSORLG00000025074	-	91	37.559	ENSAMXG00000029689	-	82	38.474	Astyanax_mexicanus
ENSORLG00000025074	-	86	36.190	ENSAMXG00000030934	-	93	36.190	Astyanax_mexicanus
ENSORLG00000025074	-	84	36.378	ENSAMXG00000038544	-	88	36.319	Astyanax_mexicanus
ENSORLG00000025074	-	88	37.459	ENSIPUG00000000467	-	82	37.459	Ictalurus_punctatus
ENSORLG00000025074	-	89	37.138	ENSIPUG00000020583	-	86	37.398	Ictalurus_punctatus
ENSORLG00000025074	-	88	39.052	ENSIPUG00000009957	-	91	39.052	Ictalurus_punctatus
ENSORLG00000025074	-	88	39.194	ENSIPUG00000023478	-	91	39.222	Ictalurus_punctatus
ENSORLG00000025074	-	89	42.880	ENSKMAG00000021728	-	93	42.880	Kryptolebias_marmoratus
ENSORLG00000025074	-	84	65.172	ENSORLG00020018037	-	86	65.172	Oryzias_latipes_hni
ENSORLG00000025074	-	89	63.279	ENSORLG00020008270	-	87	63.279	Oryzias_latipes_hni
ENSORLG00000025074	-	89	63.279	ENSORLG00020019360	-	88	63.279	Oryzias_latipes_hni
ENSORLG00000025074	-	89	36.392	ENSPKIG00000000452	-	91	36.738	Paramormyrops_kingsleyae
ENSORLG00000025074	-	82	35.017	ENSPKIG00000021000	-	92	35.225	Paramormyrops_kingsleyae
ENSORLG00000025074	-	88	37.724	ENSPNAG00000003267	-	90	37.700	Pygocentrus_nattereri
ENSORLG00000025074	-	82	39.003	ENSPNAG00000014076	-	88	39.003	Pygocentrus_nattereri