EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025098 (Gene tree)
Gene ID: 101165549
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: ras-related protein rab7-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5529 bases
Position: chr5:26357543-26363071
Accession: 101165549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040139	MMR_HSR1	PF01926.23	6.3e-06	1	1
ENSORLP00000044143	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000035628	-	3596	XM_020703466	ENSORLP00000044143	204 (aa)	XP_020559125	UPI0002A479D2
ENSORLT00000029025	-	609	-	ENSORLP00000040139	202 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025098's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04137	Mitophagy - animal	KEGG
ola04140	Autophagy - animal	KEGG
ola04144	Endocytosis	KEGG
ola04145	Phagosome	KEGG
ola05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025098	si:dkey-13a21.4	84	36.416	ENSORLG00000016555	rab3db	91	34.171
ENSORLG00000025098	si:dkey-13a21.4	96	33.333	ENSORLG00000000937	-	94	33.333
ENSORLG00000025098	si:dkey-13a21.4	79	32.500	ENSORLG00000018119	si:ch73-116o1.2	72	32.500
ENSORLG00000025098	si:dkey-13a21.4	72	31.507	ENSORLG00000025519	rras	78	32.484
ENSORLG00000025098	si:dkey-13a21.4	79	36.420	ENSORLG00000028104	rab1ab	78	36.420
ENSORLG00000025098	si:dkey-13a21.4	78	37.342	ENSORLG00000021846	-	76	37.342
ENSORLG00000025098	si:dkey-13a21.4	81	36.747	ENSORLG00000016135	rab25b	80	37.037
ENSORLG00000025098	si:dkey-13a21.4	91	33.871	ENSORLG00000010115	rab23	82	33.721
ENSORLG00000025098	si:dkey-13a21.4	79	37.037	ENSORLG00000026197	rab6a	76	37.037
ENSORLG00000025098	si:dkey-13a21.4	80	32.716	ENSORLG00000015284	-	52	32.716
ENSORLG00000025098	si:dkey-13a21.4	78	37.736	ENSORLG00000001850	RAB39B	73	37.736
ENSORLG00000025098	si:dkey-13a21.4	97	49.000	ENSORLG00000029090	-	97	49.000
ENSORLG00000025098	si:dkey-13a21.4	94	35.938	ENSORLG00000004624	rab18a	93	35.938
ENSORLG00000025098	si:dkey-13a21.4	77	31.447	ENSORLG00000018912	hrasb	95	30.811
ENSORLG00000025098	si:dkey-13a21.4	80	31.056	ENSORLG00000024443	zgc:55558	90	31.977
ENSORLG00000025098	si:dkey-13a21.4	82	35.714	ENSORLG00000003902	rab12	68	35.714
ENSORLG00000025098	si:dkey-13a21.4	84	38.372	ENSORLG00000030109	rab33ba	69	38.372
ENSORLG00000025098	si:dkey-13a21.4	81	35.260	ENSORLG00000001134	dnajc27	64	35.260
ENSORLG00000025098	si:dkey-13a21.4	96	32.701	ENSORLG00000008345	-	96	32.701
ENSORLG00000025098	si:dkey-13a21.4	80	33.333	ENSORLG00000016126	rab11al	73	33.333
ENSORLG00000025098	si:dkey-13a21.4	83	36.047	ENSORLG00000027892	RAB29	84	36.047
ENSORLG00000025098	si:dkey-13a21.4	80	32.099	ENSORLG00000013938	rab11bb	72	32.099
ENSORLG00000025098	si:dkey-13a21.4	73	38.667	ENSORLG00000030566	rab33a	71	33.333
ENSORLG00000025098	si:dkey-13a21.4	79	38.889	ENSORLG00000027669	RAB41	75	38.889
ENSORLG00000025098	si:dkey-13a21.4	91	35.135	ENSORLG00000009609	rab18b	89	35.135
ENSORLG00000025098	si:dkey-13a21.4	92	36.126	ENSORLG00000014099	si:dkey-34d22.5	85	36.126
ENSORLG00000025098	si:dkey-13a21.4	85	34.857	ENSORLG00000007406	rab14	80	34.857
ENSORLG00000025098	si:dkey-13a21.4	84	31.395	ENSORLG00000009874	rabl2	73	31.395
ENSORLG00000025098	si:dkey-13a21.4	88	33.333	ENSORLG00000004394	rab34a	68	33.333
ENSORLG00000025098	si:dkey-13a21.4	88	32.787	ENSORLG00000003119	rab34b	66	32.787
ENSORLG00000025098	si:dkey-13a21.4	85	34.857	ENSORLG00000029921	-	80	34.857
ENSORLG00000025098	si:dkey-13a21.4	61	30.081	ENSORLG00000012782	arl8bb	62	30.081
ENSORLG00000025098	si:dkey-13a21.4	80	32.716	ENSORLG00000015307	rab11ba	72	32.716
ENSORLG00000025098	si:dkey-13a21.4	90	37.297	ENSORLG00000029812	rab30	89	37.297
ENSORLG00000025098	si:dkey-13a21.4	96	36.098	ENSORLG00000030642	zgc:101559	85	36.098
ENSORLG00000025098	si:dkey-13a21.4	86	33.523	ENSORLG00000024116	RAB15	83	33.523
ENSORLG00000025098	si:dkey-13a21.4	79	35.583	ENSORLG00000003882	rab5c	73	35.583
ENSORLG00000025098	si:dkey-13a21.4	83	39.766	ENSORLG00000028885	rab35b	95	36.735
ENSORLG00000025098	si:dkey-13a21.4	78	41.975	ENSORLG00000022335	rab42a	72	42.236
ENSORLG00000025098	si:dkey-13a21.4	84	34.118	ENSORLG00000012158	rab25a	79	34.118
ENSORLG00000025098	si:dkey-13a21.4	81	50.602	ENSORLG00000006628	-	79	50.602
ENSORLG00000025098	si:dkey-13a21.4	79	35.583	ENSORLG00000012261	rab5aa	74	35.583
ENSORLG00000025098	si:dkey-13a21.4	97	47.500	ENSORLG00000006405	rab9b	94	47.500
ENSORLG00000025098	si:dkey-13a21.4	79	36.810	ENSORLG00000013432	rab2a	75	36.810
ENSORLG00000025098	si:dkey-13a21.4	88	35.556	ENSORLG00000001098	si:dkey-16l2.16	83	35.556
ENSORLG00000025098	si:dkey-13a21.4	96	45.455	ENSORLG00000017806	rab9a	96	45.455
ENSORLG00000025098	si:dkey-13a21.4	96	33.673	ENSORLG00000025395	-	96	33.673
ENSORLG00000025098	si:dkey-13a21.4	86	33.333	ENSORLG00000010846	rab15	81	33.333
ENSORLG00000025098	si:dkey-13a21.4	97	47.264	ENSORLG00000001351	-	97	47.264
ENSORLG00000025098	si:dkey-13a21.4	74	39.355	ENSORLG00000002071	-	63	39.355
ENSORLG00000025098	si:dkey-13a21.4	96	36.000	ENSORLG00000024558	-	79	36.000
ENSORLG00000025098	si:dkey-13a21.4	79	30.061	ENSORLG00000024102	kras	90	31.034
ENSORLG00000025098	si:dkey-13a21.4	81	33.939	ENSORLG00000018331	RAB11A	74	33.939
ENSORLG00000025098	si:dkey-13a21.4	79	35.802	ENSORLG00000016290	rab6bb	77	35.484
ENSORLG00000025098	si:dkey-13a21.4	75	30.247	ENSORLG00000026940	rasl11a	62	30.247
ENSORLG00000025098	si:dkey-13a21.4	78	37.342	ENSORLG00000000602	zgc:171927	72	37.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025098	si:dkey-13a21.4	100	80.882	ENSACIG00000011024	si:dkey-13a21.4	100	80.882	Amphilophus_citrinellus
ENSORLG00000025098	si:dkey-13a21.4	100	76.961	ENSAOCG00000020491	si:dkey-13a21.4	100	76.961	Amphiprion_ocellaris
ENSORLG00000025098	si:dkey-13a21.4	100	76.961	ENSAPEG00000023338	si:dkey-13a21.4	92	76.961	Amphiprion_percula
ENSORLG00000025098	si:dkey-13a21.4	100	79.412	ENSATEG00000014958	si:dkey-13a21.4	100	79.412	Anabas_testudineus
ENSORLG00000025098	si:dkey-13a21.4	96	53.333	ENSACAG00000012345	-	97	53.333	Anolis_carolinensis
ENSORLG00000025098	si:dkey-13a21.4	100	80.882	ENSACLG00000021109	si:dkey-13a21.4	99	80.882	Astatotilapia_calliptera
ENSORLG00000025098	si:dkey-13a21.4	100	53.555	ENSAMXG00000032663	si:dkey-13a21.4	97	53.555	Astyanax_mexicanus
ENSORLG00000025098	si:dkey-13a21.4	89	53.552	WBGene00004271	rab-7	100	48.804	Caenorhabditis_elegans
ENSORLG00000025098	si:dkey-13a21.4	100	81.863	ENSCVAG00000001150	si:dkey-13a21.4	100	81.863	Cyprinodon_variegatus
ENSORLG00000025098	si:dkey-13a21.4	100	64.216	ENSDARG00000026098	si:dkey-13a21.4	99	64.216	Danio_rerio
ENSORLG00000025098	si:dkey-13a21.4	87	54.444	ENSDNOG00000043559	-	96	51.515	Dasypus_novemcinctus
ENSORLG00000025098	si:dkey-13a21.4	100	79.512	ENSFHEG00000002502	si:dkey-13a21.4	100	79.512	Fundulus_heteroclitus
ENSORLG00000025098	si:dkey-13a21.4	100	78.431	ENSGAFG00000020102	si:dkey-13a21.4	100	78.431	Gambusia_affinis
ENSORLG00000025098	si:dkey-13a21.4	100	81.373	ENSHBUG00000014023	si:dkey-13a21.4	99	81.373	Haplochromis_burtoni
ENSORLG00000025098	si:dkey-13a21.4	86	78.977	ENSKMAG00000021039	si:dkey-13a21.4	74	78.977	Kryptolebias_marmoratus
ENSORLG00000025098	si:dkey-13a21.4	96	80.513	ENSLBEG00000018180	si:dkey-13a21.4	96	80.513	Labrus_bergylta
ENSORLG00000025098	si:dkey-13a21.4	100	61.650	ENSLOCG00000014749	si:dkey-13a21.4	100	61.650	Lepisosteus_oculatus
ENSORLG00000025098	si:dkey-13a21.4	84	56.725	ENSLAFG00000028984	-	83	56.725	Loxodonta_africana
ENSORLG00000025098	si:dkey-13a21.4	100	78.922	ENSMAMG00000021095	si:dkey-13a21.4	100	78.922	Mastacembelus_armatus
ENSORLG00000025098	si:dkey-13a21.4	100	80.882	ENSMZEG00005010220	si:dkey-13a21.4	99	80.882	Maylandia_zebra
ENSORLG00000025098	si:dkey-13a21.4	99	81.281	ENSNBRG00000023214	si:dkey-13a21.4	99	81.281	Neolamprologus_brichardi
ENSORLG00000025098	si:dkey-13a21.4	100	80.392	ENSONIG00000020296	si:dkey-13a21.4	100	80.392	Oreochromis_niloticus
ENSORLG00000025098	si:dkey-13a21.4	100	99.020	ENSORLG00020019465	si:dkey-13a21.4	100	99.020	Oryzias_latipes_hni
ENSORLG00000025098	si:dkey-13a21.4	100	99.020	ENSORLG00015015121	si:dkey-13a21.4	100	99.020	Oryzias_latipes_hsok
ENSORLG00000025098	si:dkey-13a21.4	96	64.467	ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	Paramormyrops_kingsleyae
ENSORLG00000025098	si:dkey-13a21.4	97	76.263	ENSPMGG00000023170	si:dkey-13a21.4	94	76.263	Periophthalmus_magnuspinnatus
ENSORLG00000025098	si:dkey-13a21.4	100	79.412	ENSPFOG00000015409	si:dkey-13a21.4	100	79.412	Poecilia_formosa
ENSORLG00000025098	si:dkey-13a21.4	100	79.412	ENSPLAG00000019688	si:dkey-13a21.4	100	79.412	Poecilia_latipinna
ENSORLG00000025098	si:dkey-13a21.4	100	79.412	ENSPMEG00000019159	si:dkey-13a21.4	100	79.412	Poecilia_mexicana
ENSORLG00000025098	si:dkey-13a21.4	100	78.431	ENSPREG00000022241	si:dkey-13a21.4	100	78.431	Poecilia_reticulata
ENSORLG00000025098	si:dkey-13a21.4	100	80.882	ENSPNYG00000018613	si:dkey-13a21.4	99	80.882	Pundamilia_nyererei
ENSORLG00000025098	si:dkey-13a21.4	84	47.159	YML001W	YPT7	85	47.159	Saccharomyces_cerevisiae
ENSORLG00000025098	si:dkey-13a21.4	96	65.306	ENSSFOG00015009566	si:dkey-13a21.4	96	65.306	Scleropages_formosus
ENSORLG00000025098	si:dkey-13a21.4	100	76.214	ENSSMAG00000013945	si:dkey-13a21.4	100	76.214	Scophthalmus_maximus
ENSORLG00000025098	si:dkey-13a21.4	100	81.373	ENSSDUG00000019738	si:dkey-13a21.4	100	81.373	Seriola_dumerili
ENSORLG00000025098	si:dkey-13a21.4	100	80.882	ENSSLDG00000011597	si:dkey-13a21.4	100	80.882	Seriola_lalandi_dorsalis
ENSORLG00000025098	si:dkey-13a21.4	83	59.412	ENSXETG00000014257	mgc75872	86	58.480	Xenopus_tropicalis