EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025129 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3273 bases
Position: chr13:16558828-16562100
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029507	RVT_1	PF00078.27	1.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000030841	-	3273	-	ENSORLP00000029507	1090 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025129's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025129	-	52	56.545	ENSORLG00000025054	-	99	56.545
ENSORLG00000025129	-	55	30.063	ENSORLG00000022026	-	93	30.063
ENSORLG00000025129	-	100	99.817	ENSORLG00000024201	-	100	99.817
ENSORLG00000025129	-	83	30.430	ENSORLG00000025871	-	75	30.430
ENSORLG00000025129	-	89	55.487	ENSORLG00000023054	-	90	55.321
ENSORLG00000025129	-	53	67.759	ENSORLG00000024294	-	99	67.759
ENSORLG00000025129	-	50	32.000	ENSORLG00000026187	-	96	32.000
ENSORLG00000025129	-	57	30.159	ENSORLG00000025964	-	95	30.159
ENSORLG00000025129	-	52	30.471	ENSORLG00000023890	-	97	30.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025129	-	62	67.356	ENSACLG00000006988	-	99	67.356	Astatotilapia_calliptera
ENSORLG00000025129	-	51	30.159	ENSACLG00000020009	-	95	30.159	Astatotilapia_calliptera
ENSORLG00000025129	-	59	30.677	ENSACLG00000021942	-	94	30.677	Astatotilapia_calliptera
ENSORLG00000025129	-	78	62.804	ENSACLG00000009813	-	100	62.804	Astatotilapia_calliptera
ENSORLG00000025129	-	53	66.265	ENSACLG00000016231	-	99	66.265	Astatotilapia_calliptera
ENSORLG00000025129	-	82	38.519	ENSAMXG00000029265	-	98	38.519	Astyanax_mexicanus
ENSORLG00000025129	-	64	30.028	ENSLBEG00000015802	-	97	30.028	Labrus_bergylta
ENSORLG00000025129	-	53	30.782	ENSMALG00000021030	-	99	30.782	Monopterus_albus
ENSORLG00000025129	-	53	30.887	ENSMALG00000018226	-	99	30.887	Monopterus_albus
ENSORLG00000025129	-	53	30.743	ENSMALG00000008286	-	99	30.743	Monopterus_albus
ENSORLG00000025129	-	53	30.887	ENSMALG00000007425	-	99	30.887	Monopterus_albus
ENSORLG00000025129	-	75	99.510	ENSORLG00020013338	-	100	99.510	Oryzias_latipes_hni
ENSORLG00000025129	-	87	35.053	ENSORLG00020003695	-	100	35.053	Oryzias_latipes_hni
ENSORLG00000025129	-	71	68.863	ENSORLG00020002955	-	100	68.863	Oryzias_latipes_hni
ENSORLG00000025129	-	53	36.237	ENSORLG00020009687	-	100	36.237	Oryzias_latipes_hni
ENSORLG00000025129	-	59	68.210	ENSORLG00015020629	-	99	68.210	Oryzias_latipes_hsok
ENSORLG00000025129	-	58	54.717	ENSORLG00015005330	-	99	54.717	Oryzias_latipes_hsok
ENSORLG00000025129	-	85	52.615	ENSOMEG00000007525	-	98	52.615	Oryzias_melastigma
ENSORLG00000025129	-	91	65.300	ENSOMEG00000015999	-	91	65.300	Oryzias_melastigma
ENSORLG00000025129	-	63	30.812	ENSXMAG00000029300	-	96	30.812	Xiphophorus_maculatus
ENSORLG00000025129	-	62	30.836	ENSXMAG00000024044	-	98	30.836	Xiphophorus_maculatus
ENSORLG00000025129	-	63	30.110	ENSXMAG00000026064	-	97	30.110	Xiphophorus_maculatus