EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000025159 (Gene tree)
Gene ID: 101156179
Gene Symbol: trpt1
Alias: -
Full Name: tRNA phosphotransferase 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3385 bases
Position: chr10:12035393-12038777
Accession: 101156179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043245	PTS_2-RNA	PF01885.16	1.9e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028268	-	1480	XM_004073154	ENSORLP00000043245	222 (aa)	XP_004073202	UPI0002A4A392

Gene Model

Click here to download ENSORLG00000025159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025159	trpt1	96	60.185	ENSG00000149743	TRPT1	94	58.333	Homo_sapiens
ENSORLG00000025159	trpt1	93	82.039	ENSAPOG00000012925	trpt1	97	80.543	Acanthochromis_polyacanthus
ENSORLG00000025159	trpt1	99	58.515	ENSAMEG00000018040	TRPT1	90	58.952	Ailuropoda_melanoleuca
ENSORLG00000025159	trpt1	89	81.726	ENSACIG00000022413	trpt1	93	80.095	Amphilophus_citrinellus
ENSORLG00000025159	trpt1	93	83.010	ENSAOCG00000001163	trpt1	84	81.448	Amphiprion_ocellaris
ENSORLG00000025159	trpt1	93	83.495	ENSAPEG00000009873	trpt1	98	80.000	Amphiprion_percula
ENSORLG00000025159	trpt1	92	82.353	ENSATEG00000014371	trpt1	97	79.186	Anabas_testudineus
ENSORLG00000025159	trpt1	92	60.784	ENSACAG00000000696	TRPT1	96	59.447	Anolis_carolinensis
ENSORLG00000025159	trpt1	96	60.369	ENSANAG00000019580	TRPT1	85	60.369	Aotus_nancymaae
ENSORLG00000025159	trpt1	93	81.553	ENSACLG00000016893	trpt1	95	79.909	Astatotilapia_calliptera
ENSORLG00000025159	trpt1	91	70.647	ENSAMXG00000010533	trpt1	93	69.811	Astyanax_mexicanus
ENSORLG00000025159	trpt1	96	60.930	ENSBTAG00000016555	TRPT1	87	60.556	Bos_taurus
ENSORLG00000025159	trpt1	96	59.817	ENSCJAG00000018169	TRPT1	85	59.817	Callithrix_jacchus
ENSORLG00000025159	trpt1	99	57.759	ENSCAFG00000014591	TRPT1	90	57.759	Canis_familiaris
ENSORLG00000025159	trpt1	99	57.759	ENSCAFG00020014101	TRPT1	93	57.759	Canis_lupus_dingo
ENSORLG00000025159	trpt1	96	60.465	ENSCHIG00000021308	TRPT1	86	60.369	Capra_hircus
ENSORLG00000025159	trpt1	79	57.955	ENSTSYG00000026766	TRPT1	87	57.955	Carlito_syrichta
ENSORLG00000025159	trpt1	96	59.346	ENSCAPG00000016934	TRPT1	89	59.346	Cavia_aperea
ENSORLG00000025159	trpt1	99	56.579	ENSCPOG00000002923	TRPT1	90	56.579	Cavia_porcellus
ENSORLG00000025159	trpt1	79	60.227	ENSCCAG00000025683	TRPT1	87	60.227	Cebus_capucinus
ENSORLG00000025159	trpt1	96	58.716	ENSCATG00000031563	TRPT1	85	58.716	Cercocebus_atys
ENSORLG00000025159	trpt1	96	57.870	ENSCLAG00000016380	TRPT1	85	57.870	Chinchilla_lanigera
ENSORLG00000025159	trpt1	96	58.986	ENSCSAG00000006952	TRPT1	85	58.986	Chlorocebus_sabaeus
ENSORLG00000025159	trpt1	63	43.972	ENSCING00000002405	-	74	43.972	Ciona_intestinalis
ENSORLG00000025159	trpt1	89	39.801	ENSCING00000024241	-	92	38.596	Ciona_intestinalis
ENSORLG00000025159	trpt1	91	40.291	ENSCSAVG00000011071	-	64	40.291	Ciona_savignyi
ENSORLG00000025159	trpt1	92	41.204	ENSCSAVG00000003949	-	96	41.204	Ciona_savignyi
ENSORLG00000025159	trpt1	99	56.957	ENSCANG00000042980	TRPT1	90	56.957	Colobus_angolensis_palliatus
ENSORLG00000025159	trpt1	99	59.821	ENSCGRG00001008474	Trpt1	89	59.821	Cricetulus_griseus_chok1gshd
ENSORLG00000025159	trpt1	99	59.821	ENSCGRG00000009793	Trpt1	89	59.821	Cricetulus_griseus_crigri
ENSORLG00000025159	trpt1	90	75.500	ENSCSEG00000005840	trpt1	89	74.057	Cynoglossus_semilaevis
ENSORLG00000025159	trpt1	99	79.638	ENSCVAG00000006318	trpt1	99	79.638	Cyprinodon_variegatus
ENSORLG00000025159	trpt1	90	68.342	ENSDARG00000037628	trpt1	99	65.441	Danio_rerio
ENSORLG00000025159	trpt1	92	49.515	ENSDNOG00000044923	TRPT1	74	49.515	Dasypus_novemcinctus
ENSORLG00000025159	trpt1	99	57.143	ENSDORG00000001624	Trpt1	91	57.143	Dipodomys_ordii
ENSORLG00000025159	trpt1	86	41.753	FBgn0053057	CG33057	90	41.753	Drosophila_melanogaster
ENSORLG00000025159	trpt1	95	54.206	ENSEBUG00000012569	-	90	55.882	Eptatretus_burgeri
ENSORLG00000025159	trpt1	99	58.079	ENSEASG00005019983	TRPT1	90	58.079	Equus_asinus_asinus
ENSORLG00000025159	trpt1	97	59.174	ENSECAG00000009917	TRPT1	88	60.199	Equus_caballus
ENSORLG00000025159	trpt1	95	60.563	ENSEEUG00000012739	TRPT1	84	60.563	Erinaceus_europaeus
ENSORLG00000025159	trpt1	93	71.845	ENSELUG00000007385	trpt1	96	70.000	Esox_lucius
ENSORLG00000025159	trpt1	99	58.515	ENSFCAG00000024621	TRPT1	90	58.515	Felis_catus
ENSORLG00000025159	trpt1	99	57.205	ENSFDAG00000002738	TRPT1	90	57.205	Fukomys_damarensis
ENSORLG00000025159	trpt1	94	84.135	ENSFHEG00000002434	trpt1	99	80.176	Fundulus_heteroclitus
ENSORLG00000025159	trpt1	91	74.257	ENSGMOG00000008716	trpt1	98	74.257	Gadus_morhua
ENSORLG00000025159	trpt1	90	54.500	ENSGALG00000050256	TRPT1	67	54.500	Gallus_gallus
ENSORLG00000025159	trpt1	93	81.068	ENSGAFG00000016762	trpt1	98	79.909	Gambusia_affinis
ENSORLG00000025159	trpt1	90	76.500	ENSGACG00000016927	trpt1	96	76.000	Gasterosteus_aculeatus
ENSORLG00000025159	trpt1	96	60.185	ENSGGOG00000012163	TRPT1	85	60.185	Gorilla_gorilla
ENSORLG00000025159	trpt1	93	82.039	ENSHBUG00000012772	trpt1	95	80.365	Haplochromis_burtoni
ENSORLG00000025159	trpt1	96	58.986	ENSHGLG00000013748	TRPT1	85	58.986	Heterocephalus_glaber_female
ENSORLG00000025159	trpt1	96	58.986	ENSHGLG00100013048	TRPT1	85	58.986	Heterocephalus_glaber_male
ENSORLG00000025159	trpt1	93	77.670	ENSHCOG00000000218	trpt1	94	76.147	Hippocampus_comes
ENSORLG00000025159	trpt1	93	64.078	ENSIPUG00000002573	trpt1	93	63.551	Ictalurus_punctatus
ENSORLG00000025159	trpt1	99	58.515	ENSSTOG00000014285	TRPT1	90	58.515	Ictidomys_tridecemlineatus
ENSORLG00000025159	trpt1	99	59.641	ENSJJAG00000010855	Trpt1	90	59.641	Jaculus_jaculus
ENSORLG00000025159	trpt1	93	80.097	ENSKMAG00000004214	trpt1	96	78.636	Kryptolebias_marmoratus
ENSORLG00000025159	trpt1	92	79.512	ENSLBEG00000005640	trpt1	95	77.982	Labrus_bergylta
ENSORLG00000025159	trpt1	92	62.927	ENSLACG00000016922	TRPT1	92	60.090	Latimeria_chalumnae
ENSORLG00000025159	trpt1	93	65.534	ENSLOCG00000001345	trpt1	89	63.927	Lepisosteus_oculatus
ENSORLG00000025159	trpt1	92	60.976	ENSLAFG00000009075	TRPT1	80	60.976	Loxodonta_africana
ENSORLG00000025159	trpt1	96	58.716	ENSMFAG00000036828	TRPT1	85	58.716	Macaca_fascicularis
ENSORLG00000025159	trpt1	96	59.259	ENSMMUG00000012940	TRPT1	85	59.259	Macaca_mulatta
ENSORLG00000025159	trpt1	96	58.716	ENSMNEG00000033348	TRPT1	85	58.716	Macaca_nemestrina
ENSORLG00000025159	trpt1	96	58.257	ENSMLEG00000031438	TRPT1	85	58.257	Mandrillus_leucophaeus
ENSORLG00000025159	trpt1	93	83.495	ENSMAMG00000021617	trpt1	95	81.651	Mastacembelus_armatus
ENSORLG00000025159	trpt1	93	82.039	ENSMZEG00005004773	trpt1	95	80.365	Maylandia_zebra
ENSORLG00000025159	trpt1	76	61.765	ENSMAUG00000014107	Trpt1	81	61.765	Mesocricetus_auratus
ENSORLG00000025159	trpt1	96	59.908	ENSMICG00000016950	TRPT1	85	59.908	Microcebus_murinus
ENSORLG00000025159	trpt1	99	59.735	ENSMOCG00000021342	Trpt1	90	59.735	Microtus_ochrogaster
ENSORLG00000025159	trpt1	90	83.500	ENSMMOG00000002896	trpt1	94	79.545	Mola_mola
ENSORLG00000025159	trpt1	93	59.716	ENSMODG00000010226	TRPT1	95	59.716	Monodelphis_domestica
ENSORLG00000025159	trpt1	93	81.553	ENSMALG00000012208	trpt1	89	78.733	Monopterus_albus
ENSORLG00000025159	trpt1	99	58.296	MGP_CAROLIEiJ_G0022627	Trpt1	89	58.296	Mus_caroli
ENSORLG00000025159	trpt1	99	58.296	ENSMUSG00000047656	Trpt1	89	58.296	Mus_musculus
ENSORLG00000025159	trpt1	95	58.986	MGP_PahariEiJ_G0014121	Trpt1	86	58.986	Mus_pahari
ENSORLG00000025159	trpt1	99	58.744	MGP_SPRETEiJ_G0023537	Trpt1	89	58.744	Mus_spretus
ENSORLG00000025159	trpt1	99	58.079	ENSMPUG00000013272	TRPT1	83	58.079	Mustela_putorius_furo
ENSORLG00000025159	trpt1	92	62.439	ENSMLUG00000024858	TRPT1	85	61.290	Myotis_lucifugus
ENSORLG00000025159	trpt1	81	60.000	ENSNGAG00000007665	Trpt1	87	60.000	Nannospalax_galili
ENSORLG00000025159	trpt1	93	76.471	ENSNBRG00000001528	trpt1	96	75.214	Neolamprologus_brichardi
ENSORLG00000025159	trpt1	99	45.455	ENSNLEG00000033525	-	90	45.455	Nomascus_leucogenys
ENSORLG00000025159	trpt1	92	58.333	ENSMEUG00000000943	TRPT1	86	56.422	Notamacropus_eugenii
ENSORLG00000025159	trpt1	97	58.407	ENSOPRG00000015917	TRPT1	90	58.407	Ochotona_princeps
ENSORLG00000025159	trpt1	93	61.353	ENSODEG00000015724	TRPT1	83	61.353	Octodon_degus
ENSORLG00000025159	trpt1	93	81.553	ENSONIG00000005333	trpt1	95	79.909	Oreochromis_niloticus
ENSORLG00000025159	trpt1	91	52.709	ENSOANG00000010375	TRPT1	94	51.628	Ornithorhynchus_anatinus
ENSORLG00000025159	trpt1	92	61.463	ENSOCUG00000022244	TRPT1	81	61.463	Oryctolagus_cuniculus
ENSORLG00000025159	trpt1	99	95.475	ENSORLG00020018944	trpt1	99	95.475	Oryzias_latipes_hni
ENSORLG00000025159	trpt1	82	94.505	ENSORLG00015017108	trpt1	81	94.505	Oryzias_latipes_hsok
ENSORLG00000025159	trpt1	99	88.636	ENSOMEG00000018645	trpt1	98	88.636	Oryzias_melastigma
ENSORLG00000025159	trpt1	99	58.333	ENSOGAG00000007134	TRPT1	90	58.333	Otolemur_garnettii
ENSORLG00000025159	trpt1	96	60.465	ENSOARG00000004961	TRPT1	84	60.465	Ovis_aries
ENSORLG00000025159	trpt1	81	59.777	ENSPPAG00000027600	TRPT1	87	59.777	Pan_paniscus
ENSORLG00000025159	trpt1	81	61.111	ENSPPRG00000022870	TRPT1	87	61.111	Panthera_pardus
ENSORLG00000025159	trpt1	79	61.364	ENSPTIG00000018872	TRPT1	85	61.364	Panthera_tigris_altaica
ENSORLG00000025159	trpt1	81	59.777	ENSPTRG00000003822	TRPT1	87	59.777	Pan_troglodytes
ENSORLG00000025159	trpt1	96	58.716	ENSPANG00000011001	TRPT1	85	58.716	Papio_anubis
ENSORLG00000025159	trpt1	93	65.217	ENSPKIG00000008323	trpt1	97	63.229	Paramormyrops_kingsleyae
ENSORLG00000025159	trpt1	98	59.091	ENSPSIG00000009910	TRPT1	92	59.091	Pelodiscus_sinensis
ENSORLG00000025159	trpt1	94	74.038	ENSPMGG00000005037	trpt1	93	74.038	Periophthalmus_magnuspinnatus
ENSORLG00000025159	trpt1	95	59.908	ENSPEMG00000013720	Trpt1	86	59.908	Peromyscus_maniculatus_bairdii
ENSORLG00000025159	trpt1	91	57.143	ENSPMAG00000001449	trpt1	97	57.143	Petromyzon_marinus
ENSORLG00000025159	trpt1	98	58.636	ENSPCIG00000008060	TRPT1	87	58.525	Phascolarctos_cinereus
ENSORLG00000025159	trpt1	93	83.495	ENSPFOG00000009475	trpt1	97	82.192	Poecilia_formosa
ENSORLG00000025159	trpt1	93	82.524	ENSPMEG00000003682	trpt1	97	81.279	Poecilia_mexicana
ENSORLG00000025159	trpt1	93	83.495	ENSPREG00000015408	trpt1	97	82.192	Poecilia_reticulata
ENSORLG00000025159	trpt1	99	57.018	ENSPPYG00000003116	TRPT1	90	57.456	Pongo_abelii
ENSORLG00000025159	trpt1	96	58.744	ENSPCAG00000000762	TRPT1	88	58.744	Procavia_capensis
ENSORLG00000025159	trpt1	97	59.817	ENSPCOG00000010370	TRPT1	86	59.817	Propithecus_coquereli
ENSORLG00000025159	trpt1	93	76.018	ENSPNYG00000014805	trpt1	96	74.786	Pundamilia_nyererei
ENSORLG00000025159	trpt1	90	69.000	ENSPNAG00000008548	trpt1	93	68.396	Pygocentrus_nattereri
ENSORLG00000025159	trpt1	99	57.589	ENSRNOG00000023023	Trpt1	90	57.589	Rattus_norvegicus
ENSORLG00000025159	trpt1	99	56.579	ENSRBIG00000040432	TRPT1	90	56.579	Rhinopithecus_bieti
ENSORLG00000025159	trpt1	99	57.456	ENSRROG00000044905	TRPT1	90	57.456	Rhinopithecus_roxellana
ENSORLG00000025159	trpt1	84	39.378	YOL102C	TPT1	83	39.378	Saccharomyces_cerevisiae
ENSORLG00000025159	trpt1	96	59.447	ENSSBOG00000021466	TRPT1	85	59.447	Saimiri_boliviensis_boliviensis
ENSORLG00000025159	trpt1	93	66.019	ENSSFOG00015005844	trpt1	99	62.946	Scleropages_formosus
ENSORLG00000025159	trpt1	93	79.612	ENSSMAG00000017744	trpt1	96	77.626	Scophthalmus_maximus
ENSORLG00000025159	trpt1	93	81.553	ENSSDUG00000017106	trpt1	98	78.281	Seriola_dumerili
ENSORLG00000025159	trpt1	90	81.000	ENSSLDG00000015957	trpt1	89	79.327	Seriola_lalandi_dorsalis
ENSORLG00000025159	trpt1	86	78.947	ENSSPAG00000007557	trpt1	75	78.947	Stegastes_partitus
ENSORLG00000025159	trpt1	95	61.860	ENSSSCG00000013040	TRPT1	82	61.860	Sus_scrofa
ENSORLG00000025159	trpt1	93	80.676	ENSTRUG00000023723	trpt1	96	78.733	Takifugu_rubripes
ENSORLG00000025159	trpt1	93	78.744	ENSTNIG00000003381	trpt1	94	76.606	Tetraodon_nigroviridis
ENSORLG00000025159	trpt1	96	56.808	ENSTBEG00000006023	TRPT1	84	56.808	Tupaia_belangeri
ENSORLG00000025159	trpt1	96	58.796	ENSTTRG00000010252	TRPT1	85	58.796	Tursiops_truncatus
ENSORLG00000025159	trpt1	96	61.290	ENSUAMG00000015208	TRPT1	85	61.290	Ursus_americanus
ENSORLG00000025159	trpt1	96	61.290	ENSUMAG00000001410	TRPT1	85	61.290	Ursus_maritimus
ENSORLG00000025159	trpt1	99	58.515	ENSVVUG00000029774	TRPT1	93	58.515	Vulpes_vulpes
ENSORLG00000025159	trpt1	97	58.796	ENSXETG00000007196	trpt1	93	58.796	Xenopus_tropicalis
ENSORLG00000025159	trpt1	89	84.343	ENSXCOG00000001614	trpt1	92	83.415	Xiphophorus_couchianus
ENSORLG00000025159	trpt1	93	83.981	ENSXMAG00000003142	trpt1	98	82.110	Xiphophorus_maculatus