EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000025218 (Gene tree)
Gene ID: 111949269
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111949269
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 10478 bases
Position: chr18:11168789-11179266
Accession: 111949269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042227	Ribonuc_2-5A	PF06479.12	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000029392	-	4874	XM_023966123	ENSORLP00000042227	927 (aa)	XP_023821891	UPI000CE24203

Gene Model

Click here to download ENSORLG00000025218's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola04140	Autophagy - animal	KEGG
ola04141	Protein processing in endoplasmic reticulum	KEGG
ola04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025218's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025218	-	96	56.652	ENSAPOG00000018674	-	98	56.652	Acanthochromis_polyacanthus
ENSORLG00000025218	-	99	56.498	ENSAOCG00000006622	-	99	56.317	Amphiprion_ocellaris
ENSORLG00000025218	-	99	58.849	ENSAOCG00000006611	-	99	58.849	Amphiprion_ocellaris
ENSORLG00000025218	-	99	56.176	ENSAPEG00000022456	-	99	55.996	Amphiprion_percula
ENSORLG00000025218	-	94	58.231	ENSATEG00000016497	-	99	58.231	Anabas_testudineus
ENSORLG00000025218	-	99	56.989	ENSACLG00000000717	-	99	56.989	Astatotilapia_calliptera
ENSORLG00000025218	-	94	44.766	ENSAMXG00000029533	-	98	44.766	Astyanax_mexicanus
ENSORLG00000025218	-	98	52.174	ENSCVAG00000016590	-	98	51.739	Cyprinodon_variegatus
ENSORLG00000025218	-	96	43.413	ENSELUG00000021509	-	99	43.413	Esox_lucius
ENSORLG00000025218	-	99	56.702	ENSMAMG00000005604	-	99	56.410	Mastacembelus_armatus
ENSORLG00000025218	-	99	56.375	ENSMZEG00005001859	-	99	56.375	Maylandia_zebra
ENSORLG00000025218	-	100	97.735	ENSORLG00020014495	-	100	97.735	Oryzias_latipes_hni
ENSORLG00000025218	-	99	80.538	ENSOMEG00000006152	-	99	80.538	Oryzias_melastigma
ENSORLG00000025218	-	56	63.585	ENSPFOG00000000794	-	99	63.585	Poecilia_formosa
ENSORLG00000025218	-	97	55.436	ENSPMEG00000016617	-	98	55.436	Poecilia_mexicana
ENSORLG00000025218	-	95	43.261	ENSPNAG00000004804	-	98	43.152	Pygocentrus_nattereri
ENSORLG00000025218	-	96	43.777	ENSSFOG00015018634	-	98	43.670	Scleropages_formosus
ENSORLG00000025218	-	99	53.326	ENSSMAG00000011502	-	98	53.326	Scophthalmus_maximus
ENSORLG00000025218	-	99	52.816	ENSSMAG00000011493	-	99	52.816	Scophthalmus_maximus
ENSORLG00000025218	-	99	56.391	ENSSDUG00000007315	-	99	59.856	Seriola_dumerili
ENSORLG00000025218	-	99	57.266	ENSSLDG00000004852	-	99	57.589	Seriola_lalandi_dorsalis
ENSORLG00000025218	-	99	57.804	ENSSLDG00000006883	-	99	57.912	Seriola_lalandi_dorsalis