EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7528 bases
Position: chr13:19309366-19316893
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040525	RVT_1	PF00078.27	7.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036788	-	456	-	ENSORLP00000040525	151 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025417	-	78	84.252	ENSORLG00000022176	-	80	84.252
ENSORLG00000025417	-	91	88.406	ENSORLG00000022894	-	76	88.406
ENSORLG00000025417	-	94	88.112	ENSORLG00000026838	-	85	88.112
ENSORLG00000025417	-	85	86.260	ENSORLG00000024721	-	90	86.260
ENSORLG00000025417	-	94	88.811	ENSORLG00000022972	-	94	88.811
ENSORLG00000025417	-	82	85.600	ENSORLG00000022721	-	71	85.600
ENSORLG00000025417	-	80	91.736	ENSORLG00000023269	-	76	91.736

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025417	-	75	43.333	ENSLBEG00000021860	-	77	43.333	Labrus_bergylta
ENSORLG00000025417	-	81	93.496	ENSORLG00020005309	-	85	93.496	Oryzias_latipes_hni
ENSORLG00000025417	-	80	92.562	ENSORLG00020014807	-	86	92.562	Oryzias_latipes_hni
ENSORLG00000025417	-	74	92.857	ENSORLG00020017866	-	71	92.857	Oryzias_latipes_hni
ENSORLG00000025417	-	84	95.312	ENSORLG00020008448	-	79	95.312	Oryzias_latipes_hni
ENSORLG00000025417	-	66	95.960	ENSORLG00020000341	-	76	95.960	Oryzias_latipes_hni
ENSORLG00000025417	-	81	92.683	ENSORLG00020017820	-	75	92.683	Oryzias_latipes_hni
ENSORLG00000025417	-	82	76.613	ENSORLG00020021895	-	88	76.613	Oryzias_latipes_hni
ENSORLG00000025417	-	92	71.711	ENSORLG00015005894	-	80	71.711	Oryzias_latipes_hsok
ENSORLG00000025417	-	95	86.897	ENSORLG00015001036	-	84	86.897	Oryzias_latipes_hsok
ENSORLG00000025417	-	89	90.370	ENSORLG00015011500	-	69	90.370	Oryzias_latipes_hsok
ENSORLG00000025417	-	87	82.143	ENSORLG00015016137	-	96	82.143	Oryzias_latipes_hsok
ENSORLG00000025417	-	81	67.213	ENSOMEG00000007757	-	83	67.213	Oryzias_melastigma
ENSORLG00000025417	-	54	68.293	ENSOMEG00000014808	-	55	68.293	Oryzias_melastigma
ENSORLG00000025417	-	81	67.213	ENSOMEG00000014346	-	80	67.213	Oryzias_melastigma
ENSORLG00000025417	-	81	62.295	ENSOMEG00000022260	-	83	62.295	Oryzias_melastigma
ENSORLG00000025417	-	50	42.268	ENSPMGG00000013430	-	63	42.268	Periophthalmus_magnuspinnatus