EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 7905 bases
Position: chr17:12218450-12226354
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	1	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	2	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	3	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	4	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	5	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	6	7
ENSORLP00000029661	zf-C2H2	PF00096.26	3.6e-32	7	7
ENSORLP00000029661	zf-met	PF12874.7	9.2e-15	1	3
ENSORLP00000029661	zf-met	PF12874.7	9.2e-15	2	3
ENSORLP00000029661	zf-met	PF12874.7	9.2e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042701	-	4980	-	ENSORLP00000029661	372 (aa)	-	-

Gene Model

Click here to download ENSORLG00000025719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025719	-	67	40.609	ENSORLG00000000076	ZNF319	87	40.609
ENSORLG00000025719	-	55	38.298	ENSORLG00000016243	-	78	38.298
ENSORLG00000025719	-	55	50.725	ENSORLG00000027303	-	57	50.725
ENSORLG00000025719	-	90	48.876	ENSORLG00000027366	-	89	48.993
ENSORLG00000025719	-	96	46.512	ENSORLG00000023828	-	74	46.734
ENSORLG00000025719	-	87	44.865	ENSORLG00000027974	-	71	45.161
ENSORLG00000025719	-	59	34.848	ENSORLG00000022825	-	54	34.848
ENSORLG00000025719	-	57	42.029	ENSORLG00000024896	-	72	42.029
ENSORLG00000025719	-	73	49.029	ENSORLG00000007032	-	94	50.000
ENSORLG00000025719	-	58	50.246	ENSORLG00000026811	-	63	50.246
ENSORLG00000025719	-	88	43.689	ENSORLG00000022699	-	97	43.689
ENSORLG00000025719	-	57	49.020	ENSORLG00000027271	-	85	49.020
ENSORLG00000025719	-	87	47.159	ENSORLG00000029896	-	87	48.293
ENSORLG00000025719	-	95	70.111	ENSORLG00000024263	-	78	69.314
ENSORLG00000025719	-	60	47.534	ENSORLG00000029814	-	79	47.534
ENSORLG00000025719	-	58	48.454	ENSORLG00000026191	-	100	48.454
ENSORLG00000025719	-	54	43.367	ENSORLG00000012434	znf1064	77	43.367
ENSORLG00000025719	-	58	44.737	ENSORLG00000021885	-	90	40.940
ENSORLG00000025719	-	60	39.080	ENSORLG00000026463	-	63	42.466
ENSORLG00000025719	-	98	47.514	ENSORLG00000023809	-	93	47.514
ENSORLG00000025719	-	88	45.960	ENSORLG00000023744	-	98	44.828
ENSORLG00000025719	-	94	39.487	ENSORLG00000029493	-	66	39.487
ENSORLG00000025719	-	88	45.813	ENSORLG00000001749	-	92	50.000
ENSORLG00000025719	-	58	35.185	ENSORLG00000025651	scrt1b	50	35.185
ENSORLG00000025719	-	55	57.732	ENSORLG00000028391	-	87	57.732
ENSORLG00000025719	-	87	50.000	ENSORLG00000027186	-	96	50.000
ENSORLG00000025719	-	72	45.024	ENSORLG00000027767	-	64	46.734
ENSORLG00000025719	-	90	35.015	ENSORLG00000028456	-	85	40.756
ENSORLG00000025719	-	54	40.769	ENSORLG00000022704	-	65	44.860
ENSORLG00000025719	-	77	42.373	ENSORLG00000013344	znf574	56	37.778
ENSORLG00000025719	-	65	44.628	ENSORLG00000029994	-	87	44.628
ENSORLG00000025719	-	59	49.479	ENSORLG00000000557	-	96	49.479
ENSORLG00000025719	-	73	45.361	ENSORLG00000009859	wt1	53	46.739
ENSORLG00000025719	-	54	35.897	ENSORLG00000009152	zbtb41	74	35.897
ENSORLG00000025719	-	65	41.912	ENSORLG00000023133	-	75	41.912
ENSORLG00000025719	-	88	30.986	ENSORLG00000028028	-	78	43.820
ENSORLG00000025719	-	87	45.588	ENSORLG00000028433	-	86	43.956
ENSORLG00000025719	-	54	42.718	ENSORLG00000009246	-	55	42.718
ENSORLG00000025719	-	99	46.269	ENSORLG00000023497	-	66	46.269
ENSORLG00000025719	-	72	46.305	ENSORLG00000006966	-	94	46.305
ENSORLG00000025719	-	66	47.429	ENSORLG00000000420	-	92	47.429
ENSORLG00000025719	-	63	52.222	ENSORLG00000012581	-	96	52.222
ENSORLG00000025719	-	64	51.190	ENSORLG00000028457	-	99	50.685
ENSORLG00000025719	-	58	48.438	ENSORLG00000027053	-	88	48.438
ENSORLG00000025719	-	88	44.949	ENSORLG00000028381	-	86	46.512
ENSORLG00000025719	-	83	39.726	ENSORLG00000010117	-	81	43.103
ENSORLG00000025719	-	56	49.714	ENSORLG00000000191	-	89	49.714
ENSORLG00000025719	-	57	38.462	ENSORLG00000019331	zbtb48	59	38.462
ENSORLG00000025719	-	56	46.907	ENSORLG00000000197	-	95	46.907
ENSORLG00000025719	-	94	46.970	ENSORLG00000022187	-	83	46.970
ENSORLG00000025719	-	96	49.367	ENSORLG00000007097	-	99	49.367
ENSORLG00000025719	-	88	47.568	ENSORLG00000027982	-	99	48.889
ENSORLG00000025719	-	60	49.153	ENSORLG00000029270	-	77	49.153
ENSORLG00000025719	-	94	47.170	ENSORLG00000024174	-	95	47.273
ENSORLG00000025719	-	73	44.022	ENSORLG00000025702	-	90	35.897
ENSORLG00000025719	-	57	48.062	ENSORLG00000025621	-	94	48.062
ENSORLG00000025719	-	76	37.500	ENSORLG00000028851	-	76	37.500
ENSORLG00000025719	-	81	43.678	ENSORLG00000025380	-	89	43.678
ENSORLG00000025719	-	53	45.763	ENSORLG00000014390	GFI1B	53	35.294
ENSORLG00000025719	-	83	50.273	ENSORLG00000023806	-	98	50.273
ENSORLG00000025719	-	86	41.270	ENSORLG00000024399	-	97	46.544
ENSORLG00000025719	-	58	47.727	ENSORLG00000030655	-	91	47.727
ENSORLG00000025719	-	62	39.062	ENSORLG00000024183	-	97	39.062
ENSORLG00000025719	-	98	48.113	ENSORLG00000028323	-	95	49.515
ENSORLG00000025719	-	80	47.959	ENSORLG00000025576	-	99	47.959
ENSORLG00000025719	-	57	42.180	ENSORLG00000027967	-	85	42.381
ENSORLG00000025719	-	59	45.320	ENSORLG00000028168	-	94	44.654
ENSORLG00000025719	-	87	50.282	ENSORLG00000021951	-	56	50.282
ENSORLG00000025719	-	77	40.909	ENSORLG00000012610	znf710b	63	40.909
ENSORLG00000025719	-	65	50.000	ENSORLG00000000262	-	89	50.000
ENSORLG00000025719	-	73	44.444	ENSORLG00000001615	-	76	43.956
ENSORLG00000025719	-	91	44.845	ENSORLG00000007263	-	99	44.845
ENSORLG00000025719	-	56	50.000	ENSORLG00000001796	-	88	50.000
ENSORLG00000025719	-	86	40.132	ENSORLG00000002268	-	95	40.132
ENSORLG00000025719	-	57	47.826	ENSORLG00000022677	-	62	47.826
ENSORLG00000025719	-	60	47.586	ENSORLG00000027009	-	71	48.889
ENSORLG00000025719	-	76	51.977	ENSORLG00000025717	-	94	51.977
ENSORLG00000025719	-	97	37.324	ENSORLG00000012485	-	76	39.574
ENSORLG00000025719	-	89	43.842	ENSORLG00000027765	-	95	43.842
ENSORLG00000025719	-	70	35.714	ENSORLG00000007885	znf646	73	35.714
ENSORLG00000025719	-	64	41.011	ENSORLG00000024789	-	72	41.011
ENSORLG00000025719	-	59	40.201	ENSORLG00000016247	prdm5	86	40.201
ENSORLG00000025719	-	95	43.860	ENSORLG00000026568	-	67	43.860
ENSORLG00000025719	-	72	42.857	ENSORLG00000027418	-	67	41.500
ENSORLG00000025719	-	87	49.746	ENSORLG00000026852	-	91	49.746
ENSORLG00000025719	-	73	49.495	ENSORLG00000023086	-	90	48.529
ENSORLG00000025719	-	89	47.917	ENSORLG00000007009	-	98	47.291
ENSORLG00000025719	-	88	48.454	ENSORLG00000013863	-	90	48.387
ENSORLG00000025719	-	59	40.909	ENSORLG00000009160	e4f1	54	40.909
ENSORLG00000025719	-	98	49.432	ENSORLG00000027822	-	96	47.656
ENSORLG00000025719	-	92	44.848	ENSORLG00000022350	-	63	44.848
ENSORLG00000025719	-	87	39.628	ENSORLG00000030610	-	85	44.444
ENSORLG00000025719	-	62	41.885	ENSORLG00000012472	znf319b	87	41.885
ENSORLG00000025719	-	87	50.251	ENSORLG00000000247	-	88	50.251
ENSORLG00000025719	-	87	46.584	ENSORLG00000026520	-	97	46.584
ENSORLG00000025719	-	72	49.246	ENSORLG00000011040	-	95	49.246
ENSORLG00000025719	-	87	49.246	ENSORLG00000027575	-	94	49.246
ENSORLG00000025719	-	66	49.206	ENSORLG00000029343	-	71	44.762
ENSORLG00000025719	-	87	48.000	ENSORLG00000026684	-	98	48.000
ENSORLG00000025719	-	59	44.545	ENSORLG00000016981	-	92	39.568
ENSORLG00000025719	-	67	42.857	ENSORLG00000002307	-	98	40.496
ENSORLG00000025719	-	58	47.273	ENSORLG00000029027	-	93	47.273
ENSORLG00000025719	-	93	48.039	ENSORLG00000030630	-	98	47.317
ENSORLG00000025719	-	94	46.957	ENSORLG00000025080	-	97	47.475
ENSORLG00000025719	-	58	48.438	ENSORLG00000025540	-	88	48.438
ENSORLG00000025719	-	58	49.275	ENSORLG00000024652	-	96	49.275
ENSORLG00000025719	-	97	48.020	ENSORLG00000029172	-	93	48.020
ENSORLG00000025719	-	88	47.120	ENSORLG00000028567	-	68	47.120
ENSORLG00000025719	-	66	46.575	ENSORLG00000028091	-	93	49.239
ENSORLG00000025719	-	66	41.379	ENSORLG00000017475	snai2	70	41.379
ENSORLG00000025719	-	58	47.458	ENSORLG00000000253	-	98	45.128
ENSORLG00000025719	-	83	52.326	ENSORLG00000023197	-	82	52.326
ENSORLG00000025719	-	74	37.019	ENSORLG00000022502	-	89	37.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025719	-	58	41.212	ENSAPOG00000021496	-	50	41.212	Acanthochromis_polyacanthus
ENSORLG00000025719	-	87	40.336	ENSAPOG00000000128	-	74	40.336	Acanthochromis_polyacanthus
ENSORLG00000025719	-	76	38.393	ENSACIG00000016133	-	85	38.393	Amphilophus_citrinellus
ENSORLG00000025719	-	88	41.463	ENSAOCG00000000463	-	61	41.463	Amphiprion_ocellaris
ENSORLG00000025719	-	90	32.551	ENSAPEG00000011635	-	65	43.787	Amphiprion_percula
ENSORLG00000025719	-	87	37.952	ENSAPEG00000010478	-	72	39.130	Amphiprion_percula
ENSORLG00000025719	-	90	39.759	ENSATEG00000024549	-	53	39.759	Anabas_testudineus
ENSORLG00000025719	-	56	43.269	ENSATEG00000022022	-	89	43.269	Anabas_testudineus
ENSORLG00000025719	-	98	30.048	ENSATEG00000011202	-	79	34.440	Anabas_testudineus
ENSORLG00000025719	-	53	35.437	ENSATEG00000015828	-	64	36.364	Anabas_testudineus
ENSORLG00000025719	-	58	40.000	ENSATEG00000024551	-	70	37.500	Anabas_testudineus
ENSORLG00000025719	-	91	41.176	ENSATEG00000011235	-	85	45.882	Anabas_testudineus
ENSORLG00000025719	-	54	39.098	ENSAMXG00000035090	-	54	39.098	Astyanax_mexicanus
ENSORLG00000025719	-	92	47.929	ENSCVAG00000003630	-	88	48.214	Cyprinodon_variegatus
ENSORLG00000025719	-	97	32.500	ENSCVAG00000004508	-	84	40.606	Cyprinodon_variegatus
ENSORLG00000025719	-	55	41.284	ENSHBUG00000000731	-	52	41.284	Haplochromis_burtoni
ENSORLG00000025719	-	95	46.766	ENSHBUG00000002878	-	65	46.766	Haplochromis_burtoni
ENSORLG00000025719	-	95	39.855	ENSHCOG00000008205	-	78	48.235	Hippocampus_comes
ENSORLG00000025719	-	87	39.831	ENSIPUG00000024007	-	65	39.831	Ictalurus_punctatus
ENSORLG00000025719	-	88	36.420	ENSKMAG00000019912	-	77	36.420	Kryptolebias_marmoratus
ENSORLG00000025719	-	56	39.759	ENSLBEG00000026552	-	51	38.938	Labrus_bergylta
ENSORLG00000025719	-	98	34.254	ENSLBEG00000011006	-	88	39.062	Labrus_bergylta
ENSORLG00000025719	-	88	46.980	ENSMAMG00000022152	-	63	48.175	Mastacembelus_armatus
ENSORLG00000025719	-	55	41.284	ENSMZEG00005004047	-	52	41.284	Maylandia_zebra
ENSORLG00000025719	-	56	43.590	ENSMALG00000014761	-	66	43.590	Monopterus_albus
ENSORLG00000025719	-	58	47.059	ENSNBRG00000004381	-	79	47.059	Neolamprologus_brichardi
ENSORLG00000025719	-	59	37.356	ENSORLG00020009554	-	81	37.356	Oryzias_latipes_hni
ENSORLG00000025719	-	54	40.244	ENSORLG00020005815	-	73	40.244	Oryzias_latipes_hni
ENSORLG00000025719	-	100	97.849	ENSORLG00015012599	-	100	97.849	Oryzias_latipes_hsok
ENSORLG00000025719	-	55	38.095	ENSOMEG00000015640	-	83	38.095	Oryzias_melastigma
ENSORLG00000025719	-	100	87.097	ENSOMEG00000010906	-	79	85.753	Oryzias_melastigma
ENSORLG00000025719	-	94	48.438	ENSPLAG00000009651	-	79	48.438	Poecilia_latipinna
ENSORLG00000025719	-	95	36.522	ENSPMEG00000023113	-	59	40.376	Poecilia_mexicana
ENSORLG00000025719	-	94	37.430	ENSPREG00000016270	-	76	40.278	Poecilia_reticulata
ENSORLG00000025719	-	88	45.882	ENSPREG00000004006	-	53	45.882	Poecilia_reticulata
ENSORLG00000025719	-	51	42.963	ENSPREG00000000853	-	51	42.963	Poecilia_reticulata
ENSORLG00000025719	-	59	47.368	ENSPNYG00000019187	-	76	47.761	Pundamilia_nyererei
ENSORLG00000025719	-	52	46.939	ENSPNYG00000023882	-	95	35.522	Pundamilia_nyererei
ENSORLG00000025719	-	98	43.548	ENSPNAG00000010317	-	92	44.681	Pygocentrus_nattereri
ENSORLG00000025719	-	57	49.451	ENSSLDG00000007568	-	80	49.451	Seriola_lalandi_dorsalis
ENSORLG00000025719	-	55	46.766	ENSSPAG00000021950	-	96	46.766	Stegastes_partitus
ENSORLG00000025719	-	55	44.724	ENSXETG00000002690	-	54	44.724	Xenopus_tropicalis
ENSORLG00000025719	-	52	43.478	ENSXCOG00000018315	-	91	43.478	Xiphophorus_couchianus