EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000025877 (Gene tree)
Gene ID: 101174426
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6730 bases
Position: chr7:22154176-22160905
Accession: 101174426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000032773	zf-U11-48K	PF05253.12	5.3e-15	1	2
ENSORLP00000032773	zf-U11-48K	PF05253.12	5.3e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027426	-	2840	XM_004070877	ENSORLP00000032773	163 (aa)	XP_004070925	UPI0002A4B25D

Gene Model

Click here to download ENSORLG00000025877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000025877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000025877	-	91	51.923	ENSORLG00000015258	-	87	51.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000025877	-	63	61.165	ENSAPOG00000000311	-	63	61.165	Acanthochromis_polyacanthus
ENSORLG00000025877	-	88	51.020	ENSAPOG00000021951	-	84	51.020	Acanthochromis_polyacanthus
ENSORLG00000025877	-	87	60.563	ENSACIG00000013400	zgc:56699	79	60.563	Amphilophus_citrinellus
ENSORLG00000025877	-	88	54.167	ENSAOCG00000013650	-	82	54.167	Amphiprion_ocellaris
ENSORLG00000025877	-	88	44.056	ENSAPEG00000006689	zgc:56699	78	44.056	Amphiprion_percula
ENSORLG00000025877	-	99	56.024	ENSATEG00000024058	zgc:56699	93	56.024	Anabas_testudineus
ENSORLG00000025877	-	84	62.143	ENSACLG00000023562	zgc:56699	71	62.143	Astatotilapia_calliptera
ENSORLG00000025877	-	91	52.866	ENSAMXG00000038346	zgc:56699	86	52.866	Astyanax_mexicanus
ENSORLG00000025877	-	73	49.593	ENSAMXG00000036095	-	51	49.593	Astyanax_mexicanus
ENSORLG00000025877	-	99	53.012	ENSCSEG00000021520	zgc:56699	79	53.012	Cynoglossus_semilaevis
ENSORLG00000025877	-	62	60.396	ENSCVAG00000009972	zgc:56699	56	60.396	Cyprinodon_variegatus
ENSORLG00000025877	-	71	50.000	ENSDARG00000099586	CR382383.2	67	50.000	Danio_rerio
ENSORLG00000025877	-	69	50.893	ENSDARG00000000887	zgc:56699	62	50.893	Danio_rerio
ENSORLG00000025877	-	60	30.097	FBgn0036826	arx	61	30.097	Drosophila_melanogaster
ENSORLG00000025877	-	70	41.026	ENSEBUG00000005577	-	62	41.026	Eptatretus_burgeri
ENSORLG00000025877	-	74	58.197	ENSELUG00000003242	gtsf1	67	58.197	Esox_lucius
ENSORLG00000025877	-	91	57.047	ENSFHEG00000006036	zgc:56699	84	46.452	Fundulus_heteroclitus
ENSORLG00000025877	-	60	55.000	ENSGMOG00000007295	zgc:56699	82	55.000	Gadus_morhua
ENSORLG00000025877	-	63	43.119	ENSGALG00000035365	-	61	43.119	Gallus_gallus
ENSORLG00000025877	-	88	60.811	ENSGAFG00000020743	zgc:56699	83	60.811	Gambusia_affinis
ENSORLG00000025877	-	84	62.143	ENSHBUG00000005327	zgc:56699	78	62.143	Haplochromis_burtoni
ENSORLG00000025877	-	94	49.689	ENSHCOG00000010296	-	90	49.689	Hippocampus_comes
ENSORLG00000025877	-	83	45.070	ENSIPUG00000011498	zgc:56699	74	45.070	Ictalurus_punctatus
ENSORLG00000025877	-	90	59.732	ENSLBEG00000015981	zgc:56699	77	62.385	Labrus_bergylta
ENSORLG00000025877	-	69	50.442	ENSLOCG00000004469	zgc:56699	78	50.442	Lepisosteus_oculatus
ENSORLG00000025877	-	80	62.121	ENSMAMG00000001846	zgc:56699	75	62.121	Mastacembelus_armatus
ENSORLG00000025877	-	84	62.143	ENSMZEG00005026479	zgc:56699	71	62.143	Maylandia_zebra
ENSORLG00000025877	-	64	59.048	ENSMMOG00000017331	zgc:56699	57	59.048	Mola_mola
ENSORLG00000025877	-	97	54.658	ENSNBRG00000006336	zgc:56699	89	54.658	Neolamprologus_brichardi
ENSORLG00000025877	-	80	64.179	ENSONIG00000016720	zgc:56699	68	64.179	Oreochromis_niloticus
ENSORLG00000025877	-	67	37.500	ENSOANG00000030381	-	74	37.500	Ornithorhynchus_anatinus
ENSORLG00000025877	-	100	100.000	ENSORLG00020011013	-	100	100.000	Oryzias_latipes_hni
ENSORLG00000025877	-	91	51.923	ENSORLG00020010990	-	87	51.923	Oryzias_latipes_hni
ENSORLG00000025877	-	91	52.564	ENSORLG00015004961	zgc:56699	87	52.564	Oryzias_latipes_hsok
ENSORLG00000025877	-	85	47.552	ENSOMEG00000013200	-	92	47.552	Oryzias_melastigma
ENSORLG00000025877	-	91	50.327	ENSOMEG00000021739	-	87	50.327	Oryzias_melastigma
ENSORLG00000025877	-	91	80.263	ENSOMEG00000021773	-	85	80.263	Oryzias_melastigma
ENSORLG00000025877	-	85	49.315	ENSPKIG00000017039	zgc:56699	82	49.315	Paramormyrops_kingsleyae
ENSORLG00000025877	-	95	51.235	ENSPMGG00000023241	zgc:56699	90	51.235	Periophthalmus_magnuspinnatus
ENSORLG00000025877	-	68	43.333	ENSPMAG00000009653	-	93	43.333	Petromyzon_marinus
ENSORLG00000025877	-	85	59.712	ENSPFOG00000009204	zgc:56699	83	58.389	Poecilia_formosa
ENSORLG00000025877	-	85	51.449	ENSPLAG00000009088	zgc:56699	76	63.077	Poecilia_latipinna
ENSORLG00000025877	-	85	59.712	ENSPMEG00000001443	zgc:56699	83	58.389	Poecilia_mexicana
ENSORLG00000025877	-	91	59.732	ENSPREG00000000745	zgc:56699	83	59.732	Poecilia_reticulata
ENSORLG00000025877	-	84	62.143	ENSPNYG00000002811	zgc:56699	78	62.143	Pundamilia_nyererei
ENSORLG00000025877	-	69	61.062	ENSPNAG00000005165	zgc:56699	62	61.062	Pygocentrus_nattereri
ENSORLG00000025877	-	91	50.000	ENSSFOG00015021600	zgc:56699	80	50.000	Scleropages_formosus
ENSORLG00000025877	-	87	61.972	ENSSMAG00000020886	zgc:56699	80	61.972	Scophthalmus_maximus
ENSORLG00000025877	-	99	55.689	ENSSDUG00000002033	zgc:56699	93	55.689	Seriola_dumerili
ENSORLG00000025877	-	99	55.689	ENSSLDG00000014113	zgc:56699	93	55.689	Seriola_lalandi_dorsalis
ENSORLG00000025877	-	69	64.912	ENSSPAG00000019854	-	74	61.905	Stegastes_partitus
ENSORLG00000025877	-	88	46.309	ENSSPAG00000010005	-	95	46.309	Stegastes_partitus
ENSORLG00000025877	-	77	52.800	ENSTRUG00000015537	zgc:56699	71	52.800	Takifugu_rubripes
ENSORLG00000025877	-	83	51.079	ENSTNIG00000012515	zgc:56699	94	51.079	Tetraodon_nigroviridis
ENSORLG00000025877	-	75	64.062	ENSXCOG00000014400	zgc:56699	70	64.062	Xiphophorus_couchianus
ENSORLG00000025877	-	96	55.901	ENSXMAG00000011692	zgc:56699	90	55.901	Xiphophorus_maculatus