EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000026242 (Gene tree)
Gene ID: 101172013
Gene Symbol: -
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 103961 bases
Position: chr14:21283379-21387339
Accession: 101172013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000040281	cwf21	PF08312.12	3.7e-16	1	1
ENSORLP00000040281	SRRM_C	PF15230.6	3.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043735	-	6624	XM_011483759	ENSORLP00000040281	627 (aa)	XP_011482061	UPI0009DA4FF1

Gene Model

Click here to download ENSORLG00000026242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000026242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000026242	-	89	79.505	ENSAPOG00000000288	SRRM3	88	79.649	Acanthochromis_polyacanthus
ENSORLG00000026242	-	89	74.735	ENSACLG00000005269	SRRM3	88	74.912	Astatotilapia_calliptera
ENSORLG00000026242	-	89	51.300	ENSAMXG00000016051	-	100	52.576	Astyanax_mexicanus
ENSORLG00000026242	-	53	50.418	ENSCPBG00000027784	SRRM3	53	44.505	Chrysemys_picta_bellii
ENSORLG00000026242	-	89	69.580	ENSCSEG00000010978	-	80	69.618	Cynoglossus_semilaevis
ENSORLG00000026242	-	89	77.465	ENSGAFG00000014777	SRRM3	88	77.622	Gambusia_affinis
ENSORLG00000026242	-	89	75.309	ENSHBUG00000005061	SRRM3	88	75.439	Haplochromis_burtoni
ENSORLG00000026242	-	89	51.724	ENSIPUG00000012467	srrm3	87	52.487	Ictalurus_punctatus
ENSORLG00000026242	-	90	76.307	ENSKMAG00000013495	SRRM3	88	76.091	Kryptolebias_marmoratus
ENSORLG00000026242	-	53	57.184	ENSLOCG00000002879	SRRM3	98	56.322	Lepisosteus_oculatus
ENSORLG00000026242	-	91	74.182	ENSMALG00000000844	-	90	73.905	Monopterus_albus
ENSORLG00000026242	-	87	63.361	ENSONIG00000012732	-	58	69.343	Oreochromis_niloticus
ENSORLG00000026242	-	100	98.724	ENSORLG00020016592	-	100	98.724	Oryzias_latipes_hni
ENSORLG00000026242	-	100	98.884	ENSORLG00015022712	SRRM3	100	98.884	Oryzias_latipes_hsok
ENSORLG00000026242	-	100	91.139	ENSOMEG00000010768	-	100	92.880	Oryzias_melastigma
ENSORLG00000026242	-	89	50.934	ENSPKIG00000017233	SRRM3	92	51.092	Paramormyrops_kingsleyae
ENSORLG00000026242	-	89	57.868	ENSPFOG00000009007	SRRM3	65	59.524	Poecilia_formosa
ENSORLG00000026242	-	89	75.972	ENSPMEG00000011981	-	88	75.614	Poecilia_mexicana
ENSORLG00000026242	-	89	78.092	ENSPREG00000008138	-	88	78.246	Poecilia_reticulata
ENSORLG00000026242	-	89	53.912	ENSPNAG00000009621	SRRM3	87	54.992	Pygocentrus_nattereri
ENSORLG00000026242	-	61	53.477	ENSSFOG00015001696	SRRM3	89	56.383	Scleropages_formosus
ENSORLG00000026242	-	89	76.232	ENSSMAG00000000476	SRRM3	100	75.545	Scophthalmus_maximus
ENSORLG00000026242	-	89	76.857	ENSSLDG00000020070	SRRM3	88	76.501	Seriola_lalandi_dorsalis
ENSORLG00000026242	-	89	76.585	ENSXMAG00000005663	-	88	76.748	Xiphophorus_maculatus