EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000026368 (Gene tree)
Gene ID: 101173296
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7635 bases
Position: chr5:17096188-17103822
Accession: 101173296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000010659	zf-met	PF12874.7	2e-21	1	4
ENSORLP00000010659	zf-met	PF12874.7	2e-21	2	4
ENSORLP00000010659	zf-met	PF12874.7	2e-21	3	4
ENSORLP00000010659	zf-met	PF12874.7	2e-21	4	4
ENSORLP00000036751	zf-met	PF12874.7	2e-14	1	3
ENSORLP00000036751	zf-met	PF12874.7	2e-14	2	3
ENSORLP00000036751	zf-met	PF12874.7	2e-14	3	3
ENSORLP00000044439	zf-met	PF12874.7	2e-14	1	3
ENSORLP00000044439	zf-met	PF12874.7	2e-14	2	3
ENSORLP00000044439	zf-met	PF12874.7	2e-14	3	3
ENSORLP00000043619	zf-met	PF12874.7	8.7e-11	1	2
ENSORLP00000043619	zf-met	PF12874.7	8.7e-11	2	2
ENSORLP00000010659	zf-C2H2_jaz	PF12171.8	7.3e-13	1	1
ENSORLP00000036751	zf-C2H2_jaz	PF12171.8	4.2e-12	1	1
ENSORLP00000044439	zf-C2H2_jaz	PF12171.8	4.2e-12	1	1
ENSORLP00000043619	zf-C2H2_jaz	PF12171.8	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000041747	-	4226	-	ENSORLP00000036751	436 (aa)	-	-
ENSORLT00000032901	-	4135	-	ENSORLP00000044439	436 (aa)	-	-
ENSORLT00000010660	-	3919	XM_011475096	ENSORLP00000010659	555 (aa)	XP_011473398	H2LX11
ENSORLT00000033270	-	4336	-	ENSORLP00000043619	422 (aa)	-	-

Gene Model

Click here to download ENSORLG00000026368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000026368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000026368	-	100	46.237	ENSACIG00000003672	-	100	45.009	Amphilophus_citrinellus
ENSORLG00000026368	-	100	48.971	ENSAPEG00000002169	-	97	50.800	Amphiprion_percula
ENSORLG00000026368	-	60	54.519	ENSFHEG00000022774	-	73	43.426	Fundulus_heteroclitus
ENSORLG00000026368	-	98	47.160	ENSKMAG00000018937	-	92	48.969	Kryptolebias_marmoratus
ENSORLG00000026368	-	57	66.972	ENSMAMG00000018920	-	65	60.050	Mastacembelus_armatus
ENSORLG00000026368	-	69	50.882	ENSNBRG00000018883	-	100	46.816	Neolamprologus_brichardi
ENSORLG00000026368	-	62	51.436	ENSONIG00000020374	-	80	51.436	Oreochromis_niloticus
ENSORLG00000026368	-	100	98.624	ENSORLG00020000211	-	100	97.838	Oryzias_latipes_hni
ENSORLG00000026368	-	100	97.706	ENSORLG00015004724	-	100	96.937	Oryzias_latipes_hsok
ENSORLG00000026368	-	100	77.936	ENSOMEG00000002792	-	100	77.402	Oryzias_melastigma
ENSORLG00000026368	-	53	50.968	ENSPKIG00000016531	-	52	51.613	Paramormyrops_kingsleyae
ENSORLG00000026368	-	100	43.361	ENSPFOG00000010723	-	67	50.735	Poecilia_formosa
ENSORLG00000026368	-	100	43.025	ENSPLAG00000012038	-	68	53.619	Poecilia_latipinna
ENSORLG00000026368	-	100	44.243	ENSPMEG00000020927	-	72	50.358	Poecilia_mexicana
ENSORLG00000026368	-	100	42.521	ENSPREG00000020523	-	68	50.725	Poecilia_reticulata
ENSORLG00000026368	-	92	44.000	ENSPNYG00000003309	-	99	45.273	Pundamilia_nyererei
ENSORLG00000026368	-	68	54.040	ENSSLDG00000017802	-	100	49.231	Seriola_lalandi_dorsalis
ENSORLG00000026368	-	100	46.564	ENSXMAG00000002135	-	72	50.118	Xiphophorus_maculatus