EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000026580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 8450 bases
Position: chr3:1776012-1784461
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043556	zf-CCHC	PF00098.23	7.7e-07	1	2
ENSORLP00000043556	zf-CCHC	PF00098.23	7.7e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036098	-	1290	-	ENSORLP00000043556	429 (aa)	-	-

Gene Model

Click here to download ENSORLG00000026580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000026580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000026580	-	57	77.778	ENSORLG00000026795	-	59	77.778
ENSORLG00000026580	-	68	69.872	ENSORLG00000022981	-	65	62.604
ENSORLG00000026580	-	62	79.924	ENSORLG00000028483	-	71	79.924

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000026580	-	60	54.015	ENSCVAG00000007715	-	60	54.015	Cyprinodon_variegatus
ENSORLG00000026580	-	53	55.947	ENSELUG00000019965	-	73	55.947	Esox_lucius
ENSORLG00000026580	-	51	51.598	ENSELUG00000010330	-	89	43.051	Esox_lucius
ENSORLG00000026580	-	69	80.066	ENSORLG00020022501	-	60	80.066	Oryzias_latipes_hni
ENSORLG00000026580	-	67	62.937	ENSOMEG00000015727	-	70	62.937	Oryzias_melastigma
ENSORLG00000026580	-	61	75.862	ENSOMEG00000008410	-	61	75.862	Oryzias_melastigma
ENSORLG00000026580	-	52	58.667	ENSPREG00000013158	-	65	57.576	Poecilia_reticulata
ENSORLG00000026580	-	54	60.684	ENSSDUG00000014810	-	59	52.492	Seriola_dumerili
ENSORLG00000026580	-	55	61.088	ENSSLDG00000008028	-	59	51.634	Seriola_lalandi_dorsalis
ENSORLG00000026580	-	54	56.838	ENSXMAG00000028949	-	58	57.983	Xiphophorus_maculatus
ENSORLG00000026580	-	54	56.838	ENSXMAG00000022338	-	58	57.983	Xiphophorus_maculatus