EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000026871 (Gene tree)
Gene ID: 105356200
Gene Symbol: sall2
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12744 bases
Position: chr17:17695461-17708204
Accession: 105356200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036700	zf-C2H2	PF00096.26	9.9e-17	1	3
ENSORLP00000036700	zf-C2H2	PF00096.26	9.9e-17	2	3
ENSORLP00000036700	zf-C2H2	PF00096.26	9.9e-17	3	3
ENSORLP00000040358	zf-C2H2	PF00096.26	9.9e-17	1	3
ENSORLP00000040358	zf-C2H2	PF00096.26	9.9e-17	2	3
ENSORLP00000040358	zf-C2H2	PF00096.26	9.9e-17	3	3
ENSORLP00000036700	zf-met	PF12874.7	2.7e-11	1	2
ENSORLP00000036700	zf-met	PF12874.7	2.7e-11	2	2
ENSORLP00000040358	zf-met	PF12874.7	2.7e-11	1	2
ENSORLP00000040358	zf-met	PF12874.7	2.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040360	-	5749	-	ENSORLP00000040358	1259 (aa)	-	UPI0009D9CB2F
ENSORLT00000039939	-	5972	XM_020710938	ENSORLP00000036700	1259 (aa)	XP_020566597	UPI0009D9CB2F

Gene Model

Click here to download ENSORLG00000026871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000026871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000026871	sall2	58	44.906	ENSORLG00000030429	si:ch211-212k18.5	68	46.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000026871	sall2	99	67.975	ENSAPOG00000015347	sall2	90	69.804	Acanthochromis_polyacanthus
ENSORLG00000026871	sall2	75	39.381	ENSAPOG00000013387	si:ch211-212k18.5	51	76.000	Acanthochromis_polyacanthus
ENSORLG00000026871	sall2	59	46.113	ENSACIG00000019922	si:ch211-212k18.5	68	47.438	Amphilophus_citrinellus
ENSORLG00000026871	sall2	99	68.157	ENSAOCG00000016559	sall2	90	69.436	Amphiprion_ocellaris
ENSORLG00000026871	sall2	70	71.916	ENSAPEG00000020215	sall2	99	73.597	Amphiprion_percula
ENSORLG00000026871	sall2	99	64.504	ENSATEG00000007303	sall2	99	65.989	Anabas_testudineus
ENSORLG00000026871	sall2	59	45.263	ENSATEG00000001254	si:ch211-212k18.5	73	46.875	Anabas_testudineus
ENSORLG00000026871	sall2	99	64.937	ENSACLG00000019867	sall2	99	65.781	Astatotilapia_calliptera
ENSORLG00000026871	sall2	98	42.801	ENSAMXG00000020956	sall2	94	43.223	Astyanax_mexicanus
ENSORLG00000026871	sall2	61	82.759	ENSAMXG00000010979	si:ch211-212k18.5	57	82.759	Astyanax_mexicanus
ENSORLG00000026871	sall2	99	58.613	ENSCSEG00000021148	sall2	90	60.016	Cynoglossus_semilaevis
ENSORLG00000026871	sall2	87	38.283	ENSCVAG00000007475	si:ch211-212k18.5	55	45.241	Cyprinodon_variegatus
ENSORLG00000026871	sall2	98	60.333	ENSCVAG00000006032	sall2	99	60.808	Cyprinodon_variegatus
ENSORLG00000026871	sall2	66	65.714	ENSDARG00000103316	si:ch211-212k18.5	57	65.714	Danio_rerio
ENSORLG00000026871	sall2	93	42.881	ENSDARG00000075116	sall2	98	43.842	Danio_rerio
ENSORLG00000026871	sall2	92	52.269	ENSELUG00000004389	sall2	87	54.712	Esox_lucius
ENSORLG00000026871	sall2	59	46.021	ENSFHEG00000017264	si:ch211-212k18.5	60	48.387	Fundulus_heteroclitus
ENSORLG00000026871	sall2	98	62.420	ENSFHEG00000017550	sall2	99	62.480	Fundulus_heteroclitus
ENSORLG00000026871	sall2	90	39.058	ENSGAFG00000003746	si:ch211-212k18.5	54	45.718	Gambusia_affinis
ENSORLG00000026871	sall2	99	62.177	ENSGAFG00000015194	sall2	99	62.647	Gambusia_affinis
ENSORLG00000026871	sall2	99	64.858	ENSHBUG00000002882	sall2	90	65.703	Haplochromis_burtoni
ENSORLG00000026871	sall2	63	64.286	ENSIPUG00000002559	sall2	53	47.028	Ictalurus_punctatus
ENSORLG00000026871	sall2	99	64.107	ENSKMAG00000020172	sall2	99	65.023	Kryptolebias_marmoratus
ENSORLG00000026871	sall2	62	79.487	ENSLBEG00000020887	si:ch211-212k18.5	66	44.954	Labrus_bergylta
ENSORLG00000026871	sall2	99	65.754	ENSMAMG00000016229	sall2	99	66.067	Mastacembelus_armatus
ENSORLG00000026871	sall2	59	46.447	ENSMAMG00000015887	si:ch211-212k18.5	77	46.174	Mastacembelus_armatus
ENSORLG00000026871	sall2	99	64.937	ENSMZEG00005012103	sall2	90	65.781	Maylandia_zebra
ENSORLG00000026871	sall2	51	56.604	ENSMMOG00000012726	si:ch211-212k18.5	66	56.604	Mola_mola
ENSORLG00000026871	sall2	88	79.310	ENSNBRG00000017645	sall2	88	79.310	Neolamprologus_brichardi
ENSORLG00000026871	sall2	61	67.568	ENSORLG00020008145	si:ch211-212k18.5	62	46.438	Oryzias_latipes_hni
ENSORLG00000026871	sall2	100	98.809	ENSORLG00020007873	sall2	100	98.809	Oryzias_latipes_hni
ENSORLG00000026871	sall2	61	67.568	ENSORLG00015004982	si:ch211-212k18.5	66	46.533	Oryzias_latipes_hsok
ENSORLG00000026871	sall2	100	98.809	ENSORLG00015002422	sall2	100	98.809	Oryzias_latipes_hsok
ENSORLG00000026871	sall2	100	87.975	ENSOMEG00000012904	sall2	100	88.449	Oryzias_melastigma
ENSORLG00000026871	sall2	58	45.174	ENSOMEG00000013949	si:ch211-212k18.5	67	45.515	Oryzias_melastigma
ENSORLG00000026871	sall2	72	50.322	ENSPKIG00000009207	sall2	89	45.112	Paramormyrops_kingsleyae
ENSORLG00000026871	sall2	70	41.842	ENSPMGG00000018714	si:ch211-212k18.5	72	42.424	Periophthalmus_magnuspinnatus
ENSORLG00000026871	sall2	99	62.824	ENSPFOG00000016504	sall2	99	63.117	Poecilia_formosa
ENSORLG00000026871	sall2	59	45.418	ENSPFOG00000023705	si:ch211-212k18.5	58	45.144	Poecilia_formosa
ENSORLG00000026871	sall2	99	63.059	ENSPLAG00000018320	sall2	99	63.352	Poecilia_latipinna
ENSORLG00000026871	sall2	59	47.020	ENSPLAG00000002577	si:ch211-212k18.5	55	45.478	Poecilia_latipinna
ENSORLG00000026871	sall2	59	45.418	ENSPMEG00000016395	si:ch211-212k18.5	58	45.144	Poecilia_mexicana
ENSORLG00000026871	sall2	99	62.745	ENSPMEG00000006335	sall2	99	62.902	Poecilia_mexicana
ENSORLG00000026871	sall2	99	62.980	ENSPREG00000021908	sall2	99	63.273	Poecilia_reticulata
ENSORLG00000026871	sall2	60	46.335	ENSPREG00000005292	si:ch211-212k18.5	55	44.805	Poecilia_reticulata
ENSORLG00000026871	sall2	72	48.911	ENSPNAG00000021463	sall2	71	48.654	Pygocentrus_nattereri
ENSORLG00000026871	sall2	67	67.442	ENSPNAG00000006123	si:ch211-212k18.5	62	67.442	Pygocentrus_nattereri
ENSORLG00000026871	sall2	99	65.566	ENSSMAG00000014157	sall2	90	66.615	Scophthalmus_maximus
ENSORLG00000026871	sall2	99	68.487	ENSSDUG00000012274	sall2	91	68.643	Seriola_dumerili
ENSORLG00000026871	sall2	59	47.480	ENSSLDG00000003393	si:ch211-212k18.5	54	47.036	Seriola_lalandi_dorsalis
ENSORLG00000026871	sall2	99	68.019	ENSSLDG00000001653	sall2	91	68.175	Seriola_lalandi_dorsalis
ENSORLG00000026871	sall2	99	67.810	ENSSPAG00000023009	sall2	90	69.291	Stegastes_partitus
ENSORLG00000026871	sall2	99	56.192	ENSTRUG00000024556	sall2	99	57.043	Takifugu_rubripes
ENSORLG00000026871	sall2	67	59.375	ENSTNIG00000007934	sall2	96	53.832	Tetraodon_nigroviridis
ENSORLG00000026871	sall2	78	39.960	ENSXCOG00000000762	si:ch211-212k18.5	54	44.974	Xiphophorus_couchianus
ENSORLG00000026871	sall2	59	46.481	ENSXMAG00000001461	si:ch211-212k18.5	55	45.575	Xiphophorus_maculatus
ENSORLG00000026871	sall2	99	62.785	ENSXMAG00000000902	sall2	99	63.394	Xiphophorus_maculatus