EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000026996 (Gene tree)
Gene ID: 105354555
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A2 homolog 1-like
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 1177 bases
Position: chr8:10452067-10453243
Accession: 105354555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044905	RRM_1	PF00076.22	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027301	-	846	XM_011478157	ENSORLP00000044905	168 (aa)	XP_011476459	-

Gene Model

Click here to download ENSORLG00000026996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000026996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000026996	-	60	30.693	ENSORLG00000026571	-	52	30.693

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000026996	-	61	49.038	ENSACIG00000013907	-	94	49.038	Amphilophus_citrinellus
ENSORLG00000026996	-	61	51.923	ENSAOCG00000013396	-	75	51.923	Amphiprion_ocellaris
ENSORLG00000026996	-	60	51.961	ENSAPEG00000003539	-	75	51.961	Amphiprion_percula
ENSORLG00000026996	-	68	43.860	ENSATEG00000024207	-	90	43.860	Anabas_testudineus
ENSORLG00000026996	-	86	52.027	ENSACLG00000025617	-	96	52.027	Astatotilapia_calliptera
ENSORLG00000026996	-	60	36.000	ENSCVAG00000011461	-	82	36.000	Cyprinodon_variegatus
ENSORLG00000026996	-	77	40.458	ENSELUG00000014190	RO21	98	40.458	Esox_lucius
ENSORLG00000026996	-	58	37.113	ENSGMOG00000000626	-	87	37.113	Gadus_morhua
ENSORLG00000026996	-	86	50.676	ENSHBUG00000002750	-	96	50.676	Haplochromis_burtoni
ENSORLG00000026996	-	85	46.528	ENSLBEG00000023432	-	91	43.519	Labrus_bergylta
ENSORLG00000026996	-	86	52.027	ENSMZEG00005013064	-	96	52.027	Maylandia_zebra
ENSORLG00000026996	-	63	39.623	ENSMMOG00000010899	-	86	39.623	Mola_mola
ENSORLG00000026996	-	85	51.748	ENSNBRG00000023103	-	97	51.748	Neolamprologus_brichardi
ENSORLG00000026996	-	77	52.308	ENSONIG00000005302	-	100	52.308	Oreochromis_niloticus
ENSORLG00000026996	-	100	94.643	ENSORLG00020020545	-	100	94.643	Oryzias_latipes_hni
ENSORLG00000026996	-	71	89.167	ENSORLG00015010118	-	78	89.167	Oryzias_latipes_hsok
ENSORLG00000026996	-	93	69.620	ENSOMEG00000008826	-	96	69.620	Oryzias_melastigma
ENSORLG00000026996	-	64	47.222	ENSPMGG00000003488	-	91	47.222	Periophthalmus_magnuspinnatus
ENSORLG00000026996	-	85	50.694	ENSPNYG00000019872	-	96	50.694	Pundamilia_nyererei
ENSORLG00000026996	-	64	41.121	ENSSMAG00000017418	-	79	41.121	Scophthalmus_maximus
ENSORLG00000026996	-	63	46.226	ENSSDUG00000011905	-	74	46.226	Seriola_dumerili
ENSORLG00000026996	-	85	51.049	ENSSLDG00000021809	-	95	51.049	Seriola_lalandi_dorsalis
ENSORLG00000026996	-	60	54.000	ENSSPAG00000004304	-	93	54.000	Stegastes_partitus
ENSORLG00000026996	-	59	39.394	ENSTRUG00000023389	-	84	39.394	Takifugu_rubripes