EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027038 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3732 bases
Position: chr16:7714608-7718339
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000043737	RVT_1	PF00078.27	5.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000045648	-	3732	-	ENSORLP00000043737	1243 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027038	-	99	39.222	ENSORLG00000027316	-	99	39.222
ENSORLG00000027038	-	98	42.939	ENSORLG00000022718	-	98	42.939
ENSORLG00000027038	-	65	30.907	ENSORLG00000028313	-	98	30.678
ENSORLG00000027038	-	87	39.581	ENSORLG00000027119	-	99	39.581
ENSORLG00000027038	-	93	38.751	ENSORLG00000030600	-	99	38.751
ENSORLG00000027038	-	99	39.165	ENSORLG00000028184	-	99	39.165
ENSORLG00000027038	-	68	98.571	ENSORLG00000026021	-	100	98.571
ENSORLG00000027038	-	88	98.265	ENSORLG00000022810	-	100	98.265
ENSORLG00000027038	-	99	38.925	ENSORLG00000028539	-	99	38.925
ENSORLG00000027038	-	100	99.276	ENSORLG00000027203	-	100	99.276
ENSORLG00000027038	-	98	42.694	ENSORLG00000024361	-	98	42.694
ENSORLG00000027038	-	73	98.448	ENSORLG00000028372	-	93	98.448
ENSORLG00000027038	-	99	41.673	ENSORLG00000027382	-	99	41.673
ENSORLG00000027038	-	99	54.428	ENSORLG00000022021	-	99	54.428
ENSORLG00000027038	-	74	45.955	ENSORLG00000024817	-	99	45.955
ENSORLG00000027038	-	84	40.263	ENSORLG00000026865	-	99	39.591
ENSORLG00000027038	-	80	55.332	ENSORLG00000030108	-	99	55.332
ENSORLG00000027038	-	98	43.102	ENSORLG00000021884	-	98	43.102
ENSORLG00000027038	-	99	38.684	ENSORLG00000025257	-	99	38.684
ENSORLG00000027038	-	76	43.410	ENSORLG00000028041	-	99	43.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027038	-	99	42.345	ENSACLG00000014667	-	99	42.345	Astatotilapia_calliptera
ENSORLG00000027038	-	96	47.671	ENSACLG00000006792	-	99	47.671	Astatotilapia_calliptera
ENSORLG00000027038	-	92	39.307	ENSACLG00000016372	-	99	39.307	Astatotilapia_calliptera
ENSORLG00000027038	-	88	40.286	ENSACLG00000005544	-	99	40.286	Astatotilapia_calliptera
ENSORLG00000027038	-	92	46.107	ENSAMXG00000030338	-	98	46.107	Astyanax_mexicanus
ENSORLG00000027038	-	98	40.472	ENSDARG00000099710	BX284696.1	98	40.472	Danio_rerio
ENSORLG00000027038	-	98	40.472	ENSDARG00000100234	BX511246.1	98	40.472	Danio_rerio
ENSORLG00000027038	-	98	41.667	ENSDARG00000103976	BX544877.1	99	41.667	Danio_rerio
ENSORLG00000027038	-	77	40.501	ENSDARG00000098557	BX323564.1	99	40.501	Danio_rerio
ENSORLG00000027038	-	61	43.081	ENSDARG00000100538	si:dkeyp-88h4.2	98	43.081	Danio_rerio
ENSORLG00000027038	-	99	40.210	ENSDARG00000105300	BX927081.1	99	40.210	Danio_rerio
ENSORLG00000027038	-	98	38.611	ENSDARG00000100925	CU104709.1	98	38.611	Danio_rerio
ENSORLG00000027038	-	98	41.667	ENSDARG00000103841	CU024870.1	99	41.667	Danio_rerio
ENSORLG00000027038	-	99	39.727	ENSKMAG00000011717	-	99	39.727	Kryptolebias_marmoratus
ENSORLG00000027038	-	74	43.716	ENSKMAG00000018235	-	99	43.716	Kryptolebias_marmoratus
ENSORLG00000027038	-	97	49.671	ENSKMAG00000014582	-	99	49.671	Kryptolebias_marmoratus
ENSORLG00000027038	-	54	40.746	ENSMZEG00005001249	-	98	40.746	Maylandia_zebra
ENSORLG00000027038	-	67	52.200	ENSONIG00000020693	-	100	52.200	Oreochromis_niloticus
ENSORLG00000027038	-	81	39.445	ENSORLG00020021337	-	99	39.484	Oryzias_latipes_hni
ENSORLG00000027038	-	87	38.475	ENSORLG00020008557	-	99	38.475	Oryzias_latipes_hni
ENSORLG00000027038	-	71	41.348	ENSORLG00020021090	-	99	41.348	Oryzias_latipes_hni
ENSORLG00000027038	-	63	57.326	ENSORLG00020008765	-	99	57.326	Oryzias_latipes_hni
ENSORLG00000027038	-	54	36.230	ENSORLG00020007503	-	99	36.230	Oryzias_latipes_hni
ENSORLG00000027038	-	63	44.374	ENSORLG00020013618	-	99	44.304	Oryzias_latipes_hni
ENSORLG00000027038	-	99	39.141	ENSORLG00020016870	-	99	39.141	Oryzias_latipes_hni
ENSORLG00000027038	-	51	37.692	ENSORLG00020010329	-	98	37.692	Oryzias_latipes_hni
ENSORLG00000027038	-	63	44.304	ENSORLG00020013755	-	100	44.304	Oryzias_latipes_hni
ENSORLG00000027038	-	74	44.946	ENSORLG00020016067	-	100	44.946	Oryzias_latipes_hni
ENSORLG00000027038	-	54	38.971	ENSORLG00020004920	-	99	38.971	Oryzias_latipes_hni
ENSORLG00000027038	-	67	45.173	ENSORLG00020007542	-	99	45.173	Oryzias_latipes_hni
ENSORLG00000027038	-	76	40.481	ENSORLG00020018783	-	96	39.732	Oryzias_latipes_hni
ENSORLG00000027038	-	71	41.236	ENSORLG00020006818	-	99	41.236	Oryzias_latipes_hni
ENSORLG00000027038	-	67	57.263	ENSORLG00015021204	-	99	57.263	Oryzias_latipes_hsok
ENSORLG00000027038	-	99	46.829	ENSORLG00015007330	-	99	46.829	Oryzias_latipes_hsok
ENSORLG00000027038	-	98	42.904	ENSORLG00015019816	-	98	42.904	Oryzias_latipes_hsok
ENSORLG00000027038	-	59	42.267	ENSORLG00015007293	-	99	42.267	Oryzias_latipes_hsok
ENSORLG00000027038	-	52	42.836	ENSORLG00015001172	-	100	42.836	Oryzias_latipes_hsok
ENSORLG00000027038	-	98	42.161	ENSORLG00015014452	-	99	42.276	Oryzias_latipes_hsok
ENSORLG00000027038	-	78	46.027	ENSORLG00015019437	-	99	46.027	Oryzias_latipes_hsok
ENSORLG00000027038	-	85	48.015	ENSOMEG00000021029	-	98	48.015	Oryzias_melastigma
ENSORLG00000027038	-	52	39.637	ENSOMEG00000003087	-	98	39.637	Oryzias_melastigma
ENSORLG00000027038	-	87	38.047	ENSOMEG00000015408	-	99	37.956	Oryzias_melastigma
ENSORLG00000027038	-	59	83.106	ENSOMEG00000003915	-	100	83.106	Oryzias_melastigma
ENSORLG00000027038	-	84	40.019	ENSPKIG00000020531	-	91	41.797	Paramormyrops_kingsleyae
ENSORLG00000027038	-	52	39.690	ENSPFOG00000023623	-	100	39.690	Poecilia_formosa
ENSORLG00000027038	-	65	35.627	ENSPFOG00000013154	-	100	35.627	Poecilia_formosa
ENSORLG00000027038	-	87	40.364	ENSXMAG00000026019	-	99	40.364	Xiphophorus_maculatus
ENSORLG00000027038	-	90	40.088	ENSXMAG00000024671	-	99	40.194	Xiphophorus_maculatus
ENSORLG00000027038	-	75	42.279	ENSXMAG00000022515	-	97	42.279	Xiphophorus_maculatus