EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000027149 (Gene tree)
Gene ID: 101175179
Gene Symbol: zgc:162730
Alias: -
Full Name: mRNA decay activator protein ZFP36
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4703 bases
Position: chr13:17772007-17776709
Accession: 101175179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000045699	zf-CCCH	PF00642.24	1.5e-19	1	2
ENSORLP00000045699	zf-CCCH	PF00642.24	1.5e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046877	-	3243	XM_004075701	ENSORLP00000045699	412 (aa)	XP_004075749	UPI0002A4BE97

Gene Model

Click here to download ENSORLG00000027149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027149	zgc:162730	100	67.371	ENSAPOG00000014920	zgc:162730	99	65.728	Acanthochromis_polyacanthus
ENSORLG00000027149	zgc:162730	58	58.577	ENSACIG00000017366	zgc:162730	97	56.485	Amphilophus_citrinellus
ENSORLG00000027149	zgc:162730	100	66.432	ENSAOCG00000002001	zgc:162730	99	65.493	Amphiprion_ocellaris
ENSORLG00000027149	zgc:162730	87	67.385	ENSAPEG00000015490	zgc:162730	99	65.099	Amphiprion_percula
ENSORLG00000027149	zgc:162730	100	61.215	ENSATEG00000008790	zgc:162730	99	60.280	Anabas_testudineus
ENSORLG00000027149	zgc:162730	100	60.471	ENSACLG00000022112	zgc:162730	99	60.941	Astatotilapia_calliptera
ENSORLG00000027149	zgc:162730	83	45.455	ENSAMXG00000035945	zgc:162730	84	45.748	Astyanax_mexicanus
ENSORLG00000027149	zgc:162730	99	59.479	ENSCSEG00000018283	zgc:162730	99	53.976	Cynoglossus_semilaevis
ENSORLG00000027149	zgc:162730	100	61.520	ENSCVAG00000018571	zgc:162730	99	59.338	Cyprinodon_variegatus
ENSORLG00000027149	zgc:162730	66	53.285	ENSDARG00000103720	zgc:162730	88	46.857	Danio_rerio
ENSORLG00000027149	zgc:162730	68	35.395	ENSDARG00000040725	zgc:114130	57	37.255	Danio_rerio
ENSORLG00000027149	zgc:162730	67	38.790	ENSELUG00000021506	zfp36l1a	63	39.373	Esox_lucius
ENSORLG00000027149	zgc:162730	68	37.063	ENSELUG00000013151	zgc:114130	56	38.000	Esox_lucius
ENSORLG00000027149	zgc:162730	100	46.919	ENSELUG00000013158	zgc:162730	99	46.462	Esox_lucius
ENSORLG00000027149	zgc:162730	99	62.919	ENSFHEG00000013710	zgc:162730	99	61.005	Fundulus_heteroclitus
ENSORLG00000027149	zgc:162730	79	59.940	ENSGMOG00000017242	zgc:162730	99	58.735	Gadus_morhua
ENSORLG00000027149	zgc:162730	100	62.648	ENSGAFG00000009953	zgc:162730	99	60.757	Gambusia_affinis
ENSORLG00000027149	zgc:162730	79	62.575	ENSGACG00000008351	zgc:162730	99	59.760	Gasterosteus_aculeatus
ENSORLG00000027149	zgc:162730	100	60.471	ENSHBUG00000015057	zgc:162730	99	60.941	Haplochromis_burtoni
ENSORLG00000027149	zgc:162730	100	60.093	ENSHCOG00000015801	zgc:162730	99	58.469	Hippocampus_comes
ENSORLG00000027149	zgc:162730	99	40.191	ENSIPUG00000018248	zgc:162730	84	43.228	Ictalurus_punctatus
ENSORLG00000027149	zgc:162730	100	62.676	ENSKMAG00000019277	zgc:162730	99	62.207	Kryptolebias_marmoratus
ENSORLG00000027149	zgc:162730	100	58.933	ENSLBEG00000018380	zgc:162730	99	57.077	Labrus_bergylta
ENSORLG00000027149	zgc:162730	99	35.714	ENSLACG00000015732	sb:cb81	59	37.849	Latimeria_chalumnae
ENSORLG00000027149	zgc:162730	99	37.793	ENSLOCG00000014587	sb:cb81	61	42.146	Lepisosteus_oculatus
ENSORLG00000027149	zgc:162730	79	46.407	ENSLOCG00000014597	zgc:162730	79	47.904	Lepisosteus_oculatus
ENSORLG00000027149	zgc:162730	100	60.839	ENSMAMG00000007516	zgc:162730	98	60.373	Mastacembelus_armatus
ENSORLG00000027149	zgc:162730	100	55.932	ENSMZEG00005014415	zgc:162730	97	58.159	Maylandia_zebra
ENSORLG00000027149	zgc:162730	59	61.446	ENSMMOG00000011506	zgc:162730	99	58.233	Mola_mola
ENSORLG00000027149	zgc:162730	100	59.070	ENSMALG00000002348	zgc:162730	99	58.140	Monopterus_albus
ENSORLG00000027149	zgc:162730	100	60.471	ENSNBRG00000013701	zgc:162730	99	60.941	Neolamprologus_brichardi
ENSORLG00000027149	zgc:162730	83	58.892	ENSONIG00000005003	zgc:162730	99	61.159	Oreochromis_niloticus
ENSORLG00000027149	zgc:162730	100	98.058	ENSORLG00020020289	zgc:162730	100	98.058	Oryzias_latipes_hni
ENSORLG00000027149	zgc:162730	100	97.579	ENSORLG00015001519	zgc:162730	100	97.579	Oryzias_latipes_hsok
ENSORLG00000027149	zgc:162730	100	81.687	ENSOMEG00000017752	zgc:162730	100	82.410	Oryzias_melastigma
ENSORLG00000027149	zgc:162730	100	60.993	ENSPFOG00000003665	zgc:162730	99	62.281	Poecilia_formosa
ENSORLG00000027149	zgc:162730	100	60.757	ENSPLAG00000000946	zgc:162730	99	60.047	Poecilia_latipinna
ENSORLG00000027149	zgc:162730	100	61.702	ENSPMEG00000000341	zgc:162730	99	60.993	Poecilia_mexicana
ENSORLG00000027149	zgc:162730	100	61.758	ENSPREG00000021263	zgc:162730	99	60.993	Poecilia_reticulata
ENSORLG00000027149	zgc:162730	100	60.471	ENSPNYG00000015553	zgc:162730	99	60.941	Pundamilia_nyererei
ENSORLG00000027149	zgc:162730	63	35.316	ENSPNAG00000023029	zgc:114130	51	38.605	Pygocentrus_nattereri
ENSORLG00000027149	zgc:162730	83	43.478	ENSPNAG00000023018	zgc:162730	84	44.058	Pygocentrus_nattereri
ENSORLG00000027149	zgc:162730	100	61.538	ENSSMAG00000018612	zgc:162730	99	59.674	Scophthalmus_maximus
ENSORLG00000027149	zgc:162730	100	63.426	ENSSDUG00000002247	zgc:162730	99	61.574	Seriola_dumerili
ENSORLG00000027149	zgc:162730	100	62.963	ENSSLDG00000008502	zgc:162730	99	61.111	Seriola_lalandi_dorsalis
ENSORLG00000027149	zgc:162730	100	66.197	ENSSPAG00000006851	zgc:162730	99	64.319	Stegastes_partitus
ENSORLG00000027149	zgc:162730	100	58.962	ENSTRUG00000021229	zgc:162730	99	58.491	Takifugu_rubripes
ENSORLG00000027149	zgc:162730	95	56.188	ENSTNIG00000000183	zgc:162730	98	56.931	Tetraodon_nigroviridis
ENSORLG00000027149	zgc:162730	100	62.648	ENSXCOG00000012791	zgc:162730	99	60.757	Xiphophorus_couchianus
ENSORLG00000027149	zgc:162730	100	62.648	ENSXMAG00000018206	zgc:162730	99	60.757	Xiphophorus_maculatus