EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027174 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 3744 bases
Position: chr21:25002160-25005903
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026378	RVT_1	PF00078.27	3.8e-45	1	1
ENSORLP00000026378	RNase_H	PF00075.24	2.7e-11	1	1
ENSORLP00000026378	Exo_endo_phos	PF03372.23	8.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043019	-	3744	-	ENSORLP00000026378	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027174	-	100	99.599	ENSORLG00000026314	-	100	99.599
ENSORLG00000027174	-	100	97.354	ENSORLG00000024423	-	100	97.354
ENSORLG00000027174	-	100	99.679	ENSORLG00000023592	-	100	99.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027174	-	99	44.444	ENSAMXG00000043500	-	99	44.444	Astyanax_mexicanus
ENSORLG00000027174	-	100	45.115	ENSDARG00000103436	BX548028.1	99	45.115	Danio_rerio
ENSORLG00000027174	-	100	45.939	ENSDARG00000103037	CR848788.1	100	45.939	Danio_rerio
ENSORLG00000027174	-	100	45.939	ENSDARG00000099201	BX908731.1	100	45.939	Danio_rerio
ENSORLG00000027174	-	65	47.672	ENSKMAG00000021014	-	100	47.672	Kryptolebias_marmoratus
ENSORLG00000027174	-	68	45.785	ENSKMAG00000012711	-	100	45.785	Kryptolebias_marmoratus
ENSORLG00000027174	-	99	45.866	ENSKMAG00000003982	-	100	45.866	Kryptolebias_marmoratus
ENSORLG00000027174	-	99	45.866	ENSKMAG00000004415	-	100	45.866	Kryptolebias_marmoratus
ENSORLG00000027174	-	100	97.674	ENSORLG00020020238	-	100	97.674	Oryzias_latipes_hni
ENSORLG00000027174	-	100	97.674	ENSORLG00020011427	-	100	97.674	Oryzias_latipes_hni
ENSORLG00000027174	-	71	97.525	ENSORLG00020019901	-	100	97.525	Oryzias_latipes_hni
ENSORLG00000027174	-	100	97.674	ENSORLG00020018543	-	100	97.674	Oryzias_latipes_hni
ENSORLG00000027174	-	88	99.634	ENSORLG00015013792	-	100	99.634	Oryzias_latipes_hsok
ENSORLG00000027174	-	85	48.590	ENSOMEG00000003836	-	98	48.590	Oryzias_melastigma
ENSORLG00000027174	-	97	45.847	ENSPKIG00000019189	-	96	45.847	Paramormyrops_kingsleyae
ENSORLG00000027174	-	82	43.768	ENSXMAG00000027130	-	99	43.961	Xiphophorus_maculatus
ENSORLG00000027174	-	99	47.017	ENSXMAG00000021070	-	100	47.017	Xiphophorus_maculatus
ENSORLG00000027174	-	90	45.870	ENSXMAG00000026588	-	99	45.870	Xiphophorus_maculatus
ENSORLG00000027174	-	99	46.778	ENSXMAG00000028309	-	100	46.778	Xiphophorus_maculatus
ENSORLG00000027174	-	78	44.817	ENSXMAG00000023078	-	99	43.865	Xiphophorus_maculatus
ENSORLG00000027174	-	90	45.870	ENSXMAG00000026248	-	99	45.870	Xiphophorus_maculatus
ENSORLG00000027174	-	71	44.160	ENSXMAG00000024143	-	100	44.160	Xiphophorus_maculatus
ENSORLG00000027174	-	61	39.608	ENSXMAG00000025430	-	99	39.608	Xiphophorus_maculatus
ENSORLG00000027174	-	69	46.074	ENSXMAG00000020874	-	95	46.074	Xiphophorus_maculatus
ENSORLG00000027174	-	99	47.017	ENSXMAG00000021755	-	100	47.017	Xiphophorus_maculatus
ENSORLG00000027174	-	99	46.099	ENSXMAG00000021061	-	100	46.099	Xiphophorus_maculatus
ENSORLG00000027174	-	92	43.433	ENSXMAG00000029466	-	100	43.433	Xiphophorus_maculatus
ENSORLG00000027174	-	63	45.891	ENSXMAG00000023377	-	100	45.891	Xiphophorus_maculatus
ENSORLG00000027174	-	90	45.870	ENSXMAG00000022223	-	99	45.870	Xiphophorus_maculatus
ENSORLG00000027174	-	64	45.668	ENSXMAG00000023126	-	100	45.668	Xiphophorus_maculatus
ENSORLG00000027174	-	78	44.715	ENSXMAG00000029923	-	99	43.768	Xiphophorus_maculatus