EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027180 (Gene tree)
Gene ID: 101160403
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 10213 bases
Position: chr5:25412625-25422837
Accession: 101160403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036986	RRM_1	PF00076.22	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000042897	-	1520	XM_023955143	ENSORLP00000036986	246 (aa)	XP_023810911	UPI0009DA8E9E

Gene Model

Click here to download ENSORLG00000027180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027180	-	63	69.325	ENSORLG00000007916	rbm24b	100	57.647
ENSORLG00000027180	-	99	56.746	ENSORLG00000012154	rbm38	98	56.746
ENSORLG00000027180	-	56	75.912	ENSORLG00000012546	rbm24a	80	65.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027180	-	92	64.807	ENSG00000132819	RBM38	94	85.593	Homo_sapiens
ENSORLG00000027180	-	100	63.780	ENSAPOG00000003301	rbm38	98	62.846	Acanthochromis_polyacanthus
ENSORLG00000027180	-	100	88.211	ENSAPOG00000009939	-	100	86.992	Acanthochromis_polyacanthus
ENSORLG00000027180	-	100	90.650	ENSACIG00000012502	-	100	96.610	Amphilophus_citrinellus
ENSORLG00000027180	-	100	61.811	ENSACIG00000000010	rbm38	98	60.630	Amphilophus_citrinellus
ENSORLG00000027180	-	97	87.866	ENSAOCG00000012559	RBM38	100	86.611	Amphiprion_ocellaris
ENSORLG00000027180	-	100	63.780	ENSAOCG00000013497	-	98	62.846	Amphiprion_ocellaris
ENSORLG00000027180	-	100	87.805	ENSAPEG00000023581	-	100	86.585	Amphiprion_percula
ENSORLG00000027180	-	100	63.780	ENSAPEG00000013137	rbm38	98	62.846	Amphiprion_percula
ENSORLG00000027180	-	100	62.353	ENSATEG00000016366	rbm38	98	61.417	Anabas_testudineus
ENSORLG00000027180	-	100	89.024	ENSATEG00000016710	-	100	87.805	Anabas_testudineus
ENSORLG00000027180	-	95	66.387	ENSACAG00000016238	RBM38	95	61.694	Anolis_carolinensis
ENSORLG00000027180	-	92	65.665	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSORLG00000027180	-	100	90.244	ENSACLG00000019514	-	100	89.024	Astatotilapia_calliptera
ENSORLG00000027180	-	96	63.136	ENSAMXG00000038120	rbm38	81	68.557	Astyanax_mexicanus
ENSORLG00000027180	-	100	74.390	ENSAMXG00000015601	-	100	71.545	Astyanax_mexicanus
ENSORLG00000027180	-	92	65.236	ENSBTAG00000008105	RBM38	89	64.224	Bos_taurus
ENSORLG00000027180	-	79	51.196	WBGene00006321	sup-12	80	66.942	Caenorhabditis_elegans
ENSORLG00000027180	-	92	65.665	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSORLG00000027180	-	92	65.665	ENSCAFG00020021943	RBM38	89	63.948	Canis_lupus_dingo
ENSORLG00000027180	-	99	62.249	ENSCHIG00000002609	RBM38	92	61.290	Capra_hircus
ENSORLG00000027180	-	92	65.236	ENSCPOG00000012781	RBM38	89	63.948	Cavia_porcellus
ENSORLG00000027180	-	92	65.665	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSORLG00000027180	-	92	64.530	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSORLG00000027180	-	92	65.236	ENSCLAG00000005906	RBM38	92	63.090	Chinchilla_lanigera
ENSORLG00000027180	-	92	64.530	ENSCSAG00000015503	RBM38	89	62.069	Chlorocebus_sabaeus
ENSORLG00000027180	-	95	66.667	ENSCPBG00000024059	RBM38	100	62.343	Chrysemys_picta_bellii
ENSORLG00000027180	-	95	50.211	ENSCANG00000030105	-	80	46.414	Colobus_angolensis_palliatus
ENSORLG00000027180	-	92	64.378	ENSCGRG00001012928	Rbm38	89	62.069	Cricetulus_griseus_chok1gshd
ENSORLG00000027180	-	81	58.128	ENSCSEG00000020943	rbm38	59	65.556	Cynoglossus_semilaevis
ENSORLG00000027180	-	100	85.366	ENSCSEG00000004701	-	100	84.959	Cynoglossus_semilaevis
ENSORLG00000027180	-	100	86.179	ENSCVAG00000005472	-	100	84.959	Cyprinodon_variegatus
ENSORLG00000027180	-	99	59.036	ENSCVAG00000015952	rbm38	98	58.661	Cyprinodon_variegatus
ENSORLG00000027180	-	99	69.796	ENSDARG00000058818	rbm38	82	79.487	Danio_rerio
ENSORLG00000027180	-	92	64.935	ENSDNOG00000032004	RBM38	98	61.739	Dasypus_novemcinctus
ENSORLG00000027180	-	92	64.957	ENSECAG00000007700	RBM38	89	62.661	Equus_caballus
ENSORLG00000027180	-	92	63.675	ENSEEUG00000013489	RBM38	89	61.638	Erinaceus_europaeus
ENSORLG00000027180	-	90	66.520	ENSELUG00000000585	-	80	72.432	Esox_lucius
ENSORLG00000027180	-	100	78.486	ENSELUG00000005849	-	100	76.096	Esox_lucius
ENSORLG00000027180	-	92	66.094	ENSFCAG00000042916	RBM38	82	88.119	Felis_catus
ENSORLG00000027180	-	71	75.141	ENSFALG00000010805	RBM38	90	71.591	Ficedula_albicollis
ENSORLG00000027180	-	100	60.236	ENSFHEG00000017748	rbm38	98	58.661	Fundulus_heteroclitus
ENSORLG00000027180	-	100	82.258	ENSFHEG00000006160	-	100	83.065	Fundulus_heteroclitus
ENSORLG00000027180	-	74	84.324	ENSGMOG00000016655	-	98	83.152	Gadus_morhua
ENSORLG00000027180	-	95	64.979	ENSGALG00000026081	RBM38	100	61.765	Gallus_gallus
ENSORLG00000027180	-	95	63.675	ENSGACG00000015224	rbm38	100	63.248	Gasterosteus_aculeatus
ENSORLG00000027180	-	94	80.603	ENSGACG00000009873	-	100	79.741	Gasterosteus_aculeatus
ENSORLG00000027180	-	95	66.667	ENSGAGG00000001187	RBM38	100	62.343	Gopherus_agassizii
ENSORLG00000027180	-	100	62.646	ENSHBUG00000012058	rbm38	98	61.811	Haplochromis_burtoni
ENSORLG00000027180	-	100	90.244	ENSHBUG00000011778	-	100	89.024	Haplochromis_burtoni
ENSORLG00000027180	-	92	62.500	ENSHGLG00000015077	RBM38	89	63.519	Heterocephalus_glaber_female
ENSORLG00000027180	-	85	86.124	ENSHCOG00000005622	-	56	88.205	Hippocampus_comes
ENSORLG00000027180	-	91	50.661	ENSHCOG00000019040	rbm38	77	54.359	Hippocampus_comes
ENSORLG00000027180	-	100	70.683	ENSIPUG00000019349	-	100	68.675	Ictalurus_punctatus
ENSORLG00000027180	-	92	59.916	ENSKMAG00000012402	rbm38	99	58.051	Kryptolebias_marmoratus
ENSORLG00000027180	-	100	62.598	ENSLBEG00000018878	rbm38	98	62.205	Labrus_bergylta
ENSORLG00000027180	-	100	87.600	ENSLBEG00000016163	RBM38	100	86.000	Labrus_bergylta
ENSORLG00000027180	-	100	73.984	ENSLOCG00000003456	rbm38	100	72.358	Lepisosteus_oculatus
ENSORLG00000027180	-	92	64.530	ENSMFAG00000043808	RBM38	82	89.109	Macaca_fascicularis
ENSORLG00000027180	-	92	64.530	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSORLG00000027180	-	92	64.530	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSORLG00000027180	-	100	86.585	ENSMAMG00000020499	RBM38	100	85.366	Mastacembelus_armatus
ENSORLG00000027180	-	100	63.813	ENSMAMG00000024135	rbm38	98	62.205	Mastacembelus_armatus
ENSORLG00000027180	-	100	90.244	ENSMZEG00005000849	-	100	89.024	Maylandia_zebra
ENSORLG00000027180	-	100	62.646	ENSMZEG00005026036	rbm38	98	61.811	Maylandia_zebra
ENSORLG00000027180	-	92	65.665	ENSMAUG00000021211	Rbm38	89	62.500	Mesocricetus_auratus
ENSORLG00000027180	-	92	66.094	ENSMICG00000038011	RBM38	98	63.519	Microcebus_murinus
ENSORLG00000027180	-	92	65.665	ENSMOCG00000008715	Rbm38	89	62.500	Microtus_ochrogaster
ENSORLG00000027180	-	100	87.805	ENSMMOG00000020051	-	100	86.992	Mola_mola
ENSORLG00000027180	-	95	64.135	ENSMODG00000016458	RBM38	92	62.447	Monodelphis_domestica
ENSORLG00000027180	-	68	70.000	ENSMALG00000022327	rbm38	72	70.238	Monopterus_albus
ENSORLG00000027180	-	77	91.534	ENSMALG00000004680	RBM38	72	91.534	Monopterus_albus
ENSORLG00000027180	-	92	62.069	MGP_CAROLIEiJ_G0024745	Rbm38	89	63.362	Mus_caroli
ENSORLG00000027180	-	92	62.069	ENSMUSG00000027510	Rbm38	89	63.362	Mus_musculus
ENSORLG00000027180	-	92	62.069	MGP_PahariEiJ_G0026186	Rbm38	89	62.661	Mus_pahari
ENSORLG00000027180	-	92	62.069	MGP_SPRETEiJ_G0025665	Rbm38	89	63.362	Mus_spretus
ENSORLG00000027180	-	72	75.275	ENSMPUG00000006518	RBM38	89	74.176	Mustela_putorius_furo
ENSORLG00000027180	-	92	63.948	ENSMLUG00000011140	RBM38	98	62.500	Myotis_lucifugus
ENSORLG00000027180	-	100	90.650	ENSNBRG00000022545	-	100	89.431	Neolamprologus_brichardi
ENSORLG00000027180	-	100	63.035	ENSNBRG00000022685	rbm38	98	62.205	Neolamprologus_brichardi
ENSORLG00000027180	-	92	64.807	ENSODEG00000007980	RBM38	89	63.090	Octodon_degus
ENSORLG00000027180	-	99	62.891	ENSONIG00000017073	rbm38	100	62.055	Oreochromis_niloticus
ENSORLG00000027180	-	99	90.612	ENSONIG00000020324	-	100	89.388	Oreochromis_niloticus
ENSORLG00000027180	-	92	65.801	ENSOANG00000009259	RBM38	81	62.445	Ornithorhynchus_anatinus
ENSORLG00000027180	-	100	100.000	ENSORLG00020020751	-	100	100.000	Oryzias_latipes_hni
ENSORLG00000027180	-	100	58.039	ENSORLG00020017871	rbm38	98	57.540	Oryzias_latipes_hni
ENSORLG00000027180	-	100	99.187	ENSORLG00015017040	-	100	99.187	Oryzias_latipes_hsok
ENSORLG00000027180	-	100	58.039	ENSORLG00015012606	rbm38	98	57.708	Oryzias_latipes_hsok
ENSORLG00000027180	-	99	59.289	ENSOMEG00000006805	rbm38	98	58.333	Oryzias_melastigma
ENSORLG00000027180	-	100	96.341	ENSOMEG00000023912	-	100	96.341	Oryzias_melastigma
ENSORLG00000027180	-	92	65.236	ENSOGAG00000029136	RBM38	88	63.793	Otolemur_garnettii
ENSORLG00000027180	-	92	66.094	ENSPPRG00000009507	RBM38	82	88.119	Panthera_pardus
ENSORLG00000027180	-	72	74.725	ENSPTRG00000013661	RBM38	82	89.109	Pan_troglodytes
ENSORLG00000027180	-	51	84.127	ENSPTRG00000045845	-	66	86.667	Pan_troglodytes
ENSORLG00000027180	-	92	54.506	ENSPANG00000033127	-	91	50.431	Papio_anubis
ENSORLG00000027180	-	92	64.530	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSORLG00000027180	-	100	70.281	ENSPKIG00000018122	-	97	88.596	Paramormyrops_kingsleyae
ENSORLG00000027180	-	100	68.526	ENSPKIG00000025417	rbm38	100	68.127	Paramormyrops_kingsleyae
ENSORLG00000027180	-	95	66.245	ENSPSIG00000011649	RBM38	93	61.667	Pelodiscus_sinensis
ENSORLG00000027180	-	99	60.317	ENSPMGG00000011343	rbm38	98	59.438	Periophthalmus_magnuspinnatus
ENSORLG00000027180	-	100	81.526	ENSPMGG00000017094	-	100	80.321	Periophthalmus_magnuspinnatus
ENSORLG00000027180	-	95	65.401	ENSPCIG00000013648	RBM38	92	61.667	Phascolarctos_cinereus
ENSORLG00000027180	-	100	56.693	ENSPFOG00000011658	rbm38	98	57.198	Poecilia_formosa
ENSORLG00000027180	-	100	85.887	ENSPLAG00000002500	-	100	83.401	Poecilia_latipinna
ENSORLG00000027180	-	100	57.255	ENSPLAG00000005218	rbm38	98	57.198	Poecilia_latipinna
ENSORLG00000027180	-	100	56.299	ENSPMEG00000015770	rbm38	98	57.198	Poecilia_mexicana
ENSORLG00000027180	-	100	56.693	ENSPREG00000007398	rbm38	98	57.198	Poecilia_reticulata
ENSORLG00000027180	-	92	66.094	ENSPCOG00000026201	RBM38	81	89.109	Propithecus_coquereli
ENSORLG00000027180	-	96	44.033	ENSPVAG00000006457	RBM38	92	42.975	Pteropus_vampyrus
ENSORLG00000027180	-	100	90.244	ENSPNYG00000019727	-	100	95.763	Pundamilia_nyererei
ENSORLG00000027180	-	100	62.257	ENSPNYG00000021373	rbm38	98	61.417	Pundamilia_nyererei
ENSORLG00000027180	-	100	75.610	ENSPNAG00000015123	-	98	82.836	Pygocentrus_nattereri
ENSORLG00000027180	-	96	67.089	ENSPNAG00000010596	rbm38	82	73.980	Pygocentrus_nattereri
ENSORLG00000027180	-	92	65.812	ENSRNOG00000006420	Rbm38	89	64.378	Rattus_norvegicus
ENSORLG00000027180	-	95	52.966	ENSRROG00000036388	-	90	49.789	Rhinopithecus_roxellana
ENSORLG00000027180	-	92	65.665	ENSSBOG00000031053	RBM38	93	89.109	Saimiri_boliviensis_boliviensis
ENSORLG00000027180	-	100	67.200	ENSSFOG00015004453	rbm38	100	69.880	Scleropages_formosus
ENSORLG00000027180	-	100	63.424	ENSSDUG00000022611	rbm38	98	62.992	Seriola_dumerili
ENSORLG00000027180	-	100	88.211	ENSSDUG00000021082	RBM38	100	86.992	Seriola_dumerili
ENSORLG00000027180	-	100	63.424	ENSSLDG00000010845	rbm38	98	62.992	Seriola_lalandi_dorsalis
ENSORLG00000027180	-	100	88.211	ENSSLDG00000011778	RBM38	100	86.992	Seriola_lalandi_dorsalis
ENSORLG00000027180	-	100	63.529	ENSSPAG00000011113	rbm38	98	62.598	Stegastes_partitus
ENSORLG00000027180	-	100	89.431	ENSSPAG00000020989	RBM38	100	88.211	Stegastes_partitus
ENSORLG00000027180	-	92	66.094	ENSSSCG00000007504	RBM38	89	64.655	Sus_scrofa
ENSORLG00000027180	-	100	84.553	ENSTRUG00000019869	-	100	83.740	Takifugu_rubripes
ENSORLG00000027180	-	96	63.223	ENSTRUG00000024954	rbm38	94	61.983	Takifugu_rubripes
ENSORLG00000027180	-	95	81.974	ENSTNIG00000007093	-	100	81.116	Tetraodon_nigroviridis
ENSORLG00000027180	-	92	66.094	ENSUAMG00000019780	RBM38	89	65.236	Ursus_americanus
ENSORLG00000027180	-	92	65.665	ENSVVUG00000017246	RBM38	89	63.948	Vulpes_vulpes
ENSORLG00000027180	-	95	62.447	ENSXETG00000011268	rbm38	99	59.916	Xenopus_tropicalis
ENSORLG00000027180	-	86	64.912	ENSXCOG00000017324	-	68	83.553	Xiphophorus_couchianus
ENSORLG00000027180	-	100	58.964	ENSXMAG00000023662	rbm38	98	59.449	Xiphophorus_maculatus