EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027187 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 3462 bases
Position: chr15:29278413-29281874
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000037569	RVT_1	PF00078.27	2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000041670	-	3462	-	ENSORLP00000037569	1153 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027187	-	100	99.219	ENSORLG00000024845	-	88	99.219
ENSORLG00000027187	-	65	30.194	ENSORLG00000022093	-	73	30.194
ENSORLG00000027187	-	65	30.233	ENSORLG00000026691	-	61	30.233
ENSORLG00000027187	-	65	30.233	ENSORLG00000029798	-	61	30.233
ENSORLG00000027187	-	95	42.934	ENSORLG00000024114	-	99	42.934
ENSORLG00000027187	-	65	30.233	ENSORLG00000025420	-	61	30.233
ENSORLG00000027187	-	80	99.027	ENSORLG00000023632	-	100	99.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027187	-	63	30.522	ENSAPOG00000011184	-	64	30.522	Acanthochromis_polyacanthus
ENSORLG00000027187	-	58	30.633	ENSACLG00000015899	-	88	30.633	Astatotilapia_calliptera
ENSORLG00000027187	-	63	30.859	ENSACLG00000022582	-	51	30.859	Astatotilapia_calliptera
ENSORLG00000027187	-	64	31.154	ENSACLG00000002829	-	56	31.154	Astatotilapia_calliptera
ENSORLG00000027187	-	64	30.946	ENSACLG00000014342	-	53	30.946	Astatotilapia_calliptera
ENSORLG00000027187	-	79	57.802	ENSACLG00000015496	-	99	57.802	Astatotilapia_calliptera
ENSORLG00000027187	-	64	30.519	ENSAMXG00000037256	-	59	30.519	Astyanax_mexicanus
ENSORLG00000027187	-	61	31.139	ENSAMXG00000040121	-	84	31.139	Astyanax_mexicanus
ENSORLG00000027187	-	50	45.470	ENSGAGG00000010426	-	82	45.470	Gopherus_agassizii
ENSORLG00000027187	-	61	30.387	ENSKMAG00000000885	-	63	30.387	Kryptolebias_marmoratus
ENSORLG00000027187	-	81	40.909	ENSKMAG00000006039	-	98	40.515	Kryptolebias_marmoratus
ENSORLG00000027187	-	63	31.250	ENSMZEG00005026873	-	51	31.250	Maylandia_zebra
ENSORLG00000027187	-	50	31.220	ENSMZEG00005020294	-	51	31.220	Maylandia_zebra
ENSORLG00000027187	-	57	30.700	ENSMZEG00005021767	-	83	30.700	Maylandia_zebra
ENSORLG00000027187	-	62	31.557	ENSONIG00000021275	-	94	31.557	Oreochromis_niloticus
ENSORLG00000027187	-	64	31.698	ENSSPAG00000013503	-	52	31.698	Stegastes_partitus
ENSORLG00000027187	-	66	50.260	ENSTNIG00000001636	-	100	50.260	Tetraodon_nigroviridis