EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000027334 (Gene tree)
Gene ID: 105357902
Gene Symbol: -
Alias: -
Full Name: SON DNA binding protein
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 22929 bases
Position: chr2:1130633-1153561
Accession: 105357902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000027558	dsrm	PF00035.26	1.9e-11	1	1
ENSORLP00000034249	dsrm	PF00035.26	2.1e-11	1	1
ENSORLP00000027558	DND1_DSRM	PF14709.7	1.9e-12	1	1
ENSORLP00000034249	DND1_DSRM	PF14709.7	2e-12	1	1
ENSORLP00000027558	G-patch	PF01585.23	3.3e-12	1	1
ENSORLP00000034249	G-patch	PF01585.23	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000039006	-	5809	-	ENSORLP00000027558	923 (aa)	-	-
ENSORLT00000042408	-	5459	XM_023961478	ENSORLP00000034249	961 (aa)	XP_023817246	UPI000CE2887B

Gene Model

Click here to download ENSORLG00000027334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027334's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027334	-	100	60.400	ENSAPOG00000000559	-	100	61.106	Acanthochromis_polyacanthus
ENSORLG00000027334	-	100	60.477	ENSAOCG00000004262	-	100	60.579	Amphiprion_ocellaris
ENSORLG00000027334	-	100	60.259	ENSAPEG00000009136	-	100	60.661	Amphiprion_percula
ENSORLG00000027334	-	63	76.370	ENSATEG00000012732	-	91	73.997	Anabas_testudineus
ENSORLG00000027334	-	59	78.506	ENSACLG00000007065	-	100	57.498	Astatotilapia_calliptera
ENSORLG00000027334	-	62	61.589	ENSELUG00000003878	-	91	66.431	Esox_lucius
ENSORLG00000027334	-	100	59.980	ENSFHEG00000019700	-	100	59.041	Fundulus_heteroclitus
ENSORLG00000027334	-	59	80.657	ENSGAFG00000016463	-	58	80.657	Gambusia_affinis
ENSORLG00000027334	-	74	73.504	ENSHBUG00000001964	-	96	60.850	Haplochromis_burtoni
ENSORLG00000027334	-	59	61.352	ENSIPUG00000007155	son	68	58.043	Ictalurus_punctatus
ENSORLG00000027334	-	100	58.374	ENSKMAG00000012003	-	100	59.941	Kryptolebias_marmoratus
ENSORLG00000027334	-	59	77.231	ENSLBEG00000008600	-	100	56.615	Labrus_bergylta
ENSORLG00000027334	-	59	78.821	ENSMAMG00000003082	-	95	59.326	Mastacembelus_armatus
ENSORLG00000027334	-	59	78.506	ENSMZEG00005018999	-	100	57.597	Maylandia_zebra
ENSORLG00000027334	-	100	58.292	ENSPLAG00000008338	-	100	59.545	Poecilia_latipinna
ENSORLG00000027334	-	100	58.491	ENSPMEG00000017611	-	100	59.743	Poecilia_mexicana
ENSORLG00000027334	-	100	59.078	ENSPREG00000017979	-	100	59.743	Poecilia_reticulata
ENSORLG00000027334	-	71	68.169	ENSSMAG00000000065	-	95	73.966	Scophthalmus_maximus
ENSORLG00000027334	-	70	72.462	ENSSDUG00000018550	-	100	58.194	Seriola_dumerili
ENSORLG00000027334	-	100	59.610	ENSSPAG00000014575	-	100	60.000	Stegastes_partitus
ENSORLG00000027334	-	59	75.503	ENSTRUG00000019967	-	100	54.736	Takifugu_rubripes
ENSORLG00000027334	-	50	45.877	ENSXETG00000014115	son	92	60.294	Xenopus_tropicalis
ENSORLG00000027334	-	59	80.146	ENSXMAG00000025239	-	100	58.911	Xiphophorus_maculatus