EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027391 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Minus strand
Length: 4735 bases
Position: chr1:9389591-9394325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000042910	zf-CCHC	PF00098.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000043783	-	1128	-	ENSORLP00000042910	375 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027391	-	87	63.554	ENSORLG00000029602	-	93	62.832
ENSORLG00000027391	-	89	64.412	ENSORLG00000023496	-	96	64.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027391	-	90	34.167	ENSAMXG00000042165	-	93	34.167	Astyanax_mexicanus
ENSORLG00000027391	-	71	35.766	ENSAMXG00000036244	-	71	35.273	Astyanax_mexicanus
ENSORLG00000027391	-	93	32.584	ENSFHEG00000001818	-	87	32.584	Fundulus_heteroclitus
ENSORLG00000027391	-	85	33.642	ENSHBUG00000010718	-	95	33.642	Haplochromis_burtoni
ENSORLG00000027391	-	88	34.125	ENSHCOG00000001473	-	93	34.718	Hippocampus_comes
ENSORLG00000027391	-	53	32.828	ENSLOCG00000010704	-	93	32.828	Lepisosteus_oculatus
ENSORLG00000027391	-	79	31.126	ENSMAMG00000007057	-	89	31.126	Mastacembelus_armatus
ENSORLG00000027391	-	63	37.083	ENSMZEG00005021915	-	82	34.752	Maylandia_zebra
ENSORLG00000027391	-	85	34.259	ENSMZEG00005007727	-	95	34.259	Maylandia_zebra
ENSORLG00000027391	-	96	65.526	ENSORLG00020020969	-	95	64.987	Oryzias_latipes_hni
ENSORLG00000027391	-	94	61.017	ENSORLG00020001780	-	95	60.335	Oryzias_latipes_hni
ENSORLG00000027391	-	90	57.726	ENSORLG00020007518	-	94	57.726	Oryzias_latipes_hni
ENSORLG00000027391	-	86	36.716	ENSPREG00000001860	-	88	36.119	Poecilia_reticulata
ENSORLG00000027391	-	82	33.333	ENSPNAG00000026690	-	79	33.651	Pygocentrus_nattereri
ENSORLG00000027391	-	81	30.293	ENSPNAG00000001406	-	90	30.097	Pygocentrus_nattereri
ENSORLG00000027391	-	74	33.214	ENSPNAG00000011784	-	91	33.216	Pygocentrus_nattereri