EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027494 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4400 bases
Position: chr17:10071065-10075464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036189	zf-C2H2	PF00096.26	1.3e-13	1	2
ENSORLP00000036189	zf-C2H2	PF00096.26	1.3e-13	2	2
ENSORLP00000036189	zf-met	PF12874.7	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000040923	-	2124	-	ENSORLP00000036189	495 (aa)	-	UPI0005CC338A

Gene Model

Click here to download ENSORLG00000027494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027494	-	50	53.448	ENSORLG00000000253	-	98	53.448
ENSORLG00000027494	-	59	42.857	ENSORLG00000007263	-	78	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027494	-	89	50.743	ENSCVAG00000010877	-	100	50.106	Cyprinodon_variegatus
ENSORLG00000027494	-	53	46.809	ENSMALG00000008786	-	85	45.833	Monopterus_albus
ENSORLG00000027494	-	100	97.980	ENSORLG00020019354	-	100	97.980	Oryzias_latipes_hni
ENSORLG00000027494	-	91	94.457	ENSORLG00015018295	-	100	94.457	Oryzias_latipes_hsok
ENSORLG00000027494	-	93	78.913	ENSOMEG00000020943	-	97	78.913	Oryzias_melastigma
ENSORLG00000027494	-	91	49.263	ENSPMEG00000006754	-	95	48.958	Poecilia_mexicana
ENSORLG00000027494	-	89	48.276	ENSPREG00000021116	-	95	48.504	Poecilia_reticulata
ENSORLG00000027494	-	51	50.000	ENSXMAG00000026679	-	98	49.383	Xiphophorus_maculatus