EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 7573 bases
Position: chr6:9754673-9762245
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036001	RVT_1	PF00078.27	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000027160	-	2094	-	ENSORLP00000036001	697 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027546	-	93	61.398	ENSORLG00000026506	-	50	61.398
ENSORLG00000027546	-	93	65.512	ENSORLG00000027499	-	51	65.512
ENSORLG00000027546	-	81	40.372	ENSORLG00000024094	-	69	38.939
ENSORLG00000027546	-	77	56.318	ENSORLG00000004601	-	71	56.318
ENSORLG00000027546	-	86	63.279	ENSORLG00000025074	-	90	62.742
ENSORLG00000027546	-	93	63.014	ENSORLG00000028280	-	94	63.014
ENSORLG00000027546	-	61	73.903	ENSORLG00000024204	-	99	73.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027546	-	51	30.184	ENSAPOG00000012172	-	68	31.053	Acanthochromis_polyacanthus
ENSORLG00000027546	-	64	40.136	ENSACAG00000029367	-	62	40.136	Anolis_carolinensis
ENSORLG00000027546	-	86	39.474	ENSAMXG00000029689	-	83	39.423	Astyanax_mexicanus
ENSORLG00000027546	-	93	37.755	ENSAMXG00000033831	-	87	37.977	Astyanax_mexicanus
ENSORLG00000027546	-	84	37.599	ENSAMXG00000038544	-	93	37.599	Astyanax_mexicanus
ENSORLG00000027546	-	93	37.781	ENSAMXG00000036897	-	93	37.666	Astyanax_mexicanus
ENSORLG00000027546	-	87	37.082	ENSAMXG00000030934	-	99	37.082	Astyanax_mexicanus
ENSORLG00000027546	-	87	41.290	ENSAMXG00000043875	-	89	41.290	Astyanax_mexicanus
ENSORLG00000027546	-	81	37.913	ENSIPUG00000000467	-	78	37.913	Ictalurus_punctatus
ENSORLG00000027546	-	81	40.140	ENSIPUG00000020583	-	89	39.478	Ictalurus_punctatus
ENSORLG00000027546	-	81	41.873	ENSIPUG00000009957	-	88	41.885	Ictalurus_punctatus
ENSORLG00000027546	-	81	40.348	ENSIPUG00000023478	-	87	40.348	Ictalurus_punctatus
ENSORLG00000027546	-	85	44.426	ENSKMAG00000021728	-	91	44.426	Kryptolebias_marmoratus
ENSORLG00000027546	-	93	65.805	ENSORLG00020008270	-	94	65.805	Oryzias_latipes_hni
ENSORLG00000027546	-	87	64.052	ENSORLG00020018037	-	94	62.893	Oryzias_latipes_hni
ENSORLG00000027546	-	93	65.805	ENSORLG00020019360	-	97	64.793	Oryzias_latipes_hni
ENSORLG00000027546	-	86	37.874	ENSPKIG00000000452	-	93	37.874	Paramormyrops_kingsleyae
ENSORLG00000027546	-	81	37.743	ENSPKIG00000021000	-	94	37.479	Paramormyrops_kingsleyae
ENSORLG00000027546	-	81	39.619	ENSPNAG00000014076	-	88	39.619	Pygocentrus_nattereri
ENSORLG00000027546	-	87	37.540	ENSPNAG00000003267	-	97	36.212	Pygocentrus_nattereri