EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00000027557 (Gene tree)
Gene ID: 101168181
Gene Symbol: thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5832 bases
Position: chr1:23300177-23306008
Accession: 101168181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000012269	THUMP	PF02926.17	1.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000012270	-	1945	XM_004066053	ENSORLP00000012269	306 (aa)	XP_004066101	H2M1I6

Gene Model

Click here to download ENSORLG00000027557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027557	thumpd1	98	52.077	ENSG00000066654	THUMPD1	88	49.219	Homo_sapiens
ENSORLG00000027557	thumpd1	99	75.710	ENSAPOG00000008440	thumpd1	98	77.287	Acanthochromis_polyacanthus
ENSORLG00000027557	thumpd1	97	53.526	ENSAMEG00000006257	THUMPD1	86	53.526	Ailuropoda_melanoleuca
ENSORLG00000027557	thumpd1	99	76.568	ENSACIG00000024395	thumpd1	88	80.623	Amphilophus_citrinellus
ENSORLG00000027557	thumpd1	99	76.341	ENSAOCG00000003509	thumpd1	98	77.603	Amphiprion_ocellaris
ENSORLG00000027557	thumpd1	99	76.899	ENSAPEG00000010515	thumpd1	98	78.481	Amphiprion_percula
ENSORLG00000027557	thumpd1	99	77.389	ENSATEG00000004737	thumpd1	98	77.389	Anabas_testudineus
ENSORLG00000027557	thumpd1	87	56.115	ENSAPLG00000015259	THUMPD1	88	59.524	Anas_platyrhynchos
ENSORLG00000027557	thumpd1	85	54.710	ENSACAG00000009625	-	85	57.037	Anolis_carolinensis
ENSORLG00000027557	thumpd1	76	49.787	ENSANAG00000027040	-	62	49.787	Aotus_nancymaae
ENSORLG00000027557	thumpd1	85	47.909	ENSANAG00000027311	-	75	47.909	Aotus_nancymaae
ENSORLG00000027557	thumpd1	76	62.553	ENSANAG00000026882	-	67	62.553	Aotus_nancymaae
ENSORLG00000027557	thumpd1	96	76.144	ENSACLG00000004830	thumpd1	99	76.250	Astatotilapia_calliptera
ENSORLG00000027557	thumpd1	97	57.705	ENSAMXG00000012356	thumpd1	78	64.202	Astyanax_mexicanus
ENSORLG00000027557	thumpd1	82	58.755	ENSBTAG00000047673	THUMPD1	72	58.755	Bos_taurus
ENSORLG00000027557	thumpd1	87	56.296	ENSCJAG00000009499	THUMPD1	67	62.128	Callithrix_jacchus
ENSORLG00000027557	thumpd1	89	55.124	ENSCAFG00000017985	THUMPD1	66	62.128	Canis_familiaris
ENSORLG00000027557	thumpd1	89	55.124	ENSCAFG00020021861	THUMPD1	66	62.128	Canis_lupus_dingo
ENSORLG00000027557	thumpd1	82	59.375	ENSCHIG00000010134	THUMPD1	71	59.375	Capra_hircus
ENSORLG00000027557	thumpd1	78	60.905	ENSTSYG00000011537	THUMPD1	69	60.905	Carlito_syrichta
ENSORLG00000027557	thumpd1	78	62.397	ENSCPOG00000023684	-	68	62.397	Cavia_porcellus
ENSORLG00000027557	thumpd1	78	62.397	ENSCPOG00000008919	-	68	62.397	Cavia_porcellus
ENSORLG00000027557	thumpd1	76	62.128	ENSCCAG00000030205	THUMPD1	67	62.128	Cebus_capucinus
ENSORLG00000027557	thumpd1	90	53.214	ENSCCAG00000019379	-	69	53.214	Cebus_capucinus
ENSORLG00000027557	thumpd1	82	49.430	ENSCATG00000020844	-	72	49.430	Cercocebus_atys
ENSORLG00000027557	thumpd1	90	55.830	ENSCATG00000040309	THUMPD1	67	62.553	Cercocebus_atys
ENSORLG00000027557	thumpd1	76	63.248	ENSCLAG00000016508	THUMPD1	66	63.248	Chinchilla_lanigera
ENSORLG00000027557	thumpd1	90	55.830	ENSCSAG00000007610	THUMPD1	67	62.553	Chlorocebus_sabaeus
ENSORLG00000027557	thumpd1	96	41.100	ENSCSAG00000009860	-	60	43.066	Chlorocebus_sabaeus
ENSORLG00000027557	thumpd1	76	62.821	ENSCHOG00000005587	THUMPD1	66	62.821	Choloepus_hoffmanni
ENSORLG00000027557	thumpd1	95	57.475	ENSCPBG00000019055	THUMPD1	75	61.887	Chrysemys_picta_bellii
ENSORLG00000027557	thumpd1	81	31.481	ENSCING00000021274	-	95	31.481	Ciona_intestinalis
ENSORLG00000027557	thumpd1	72	56.502	ENSCANG00000035822	-	72	56.502	Colobus_angolensis_palliatus
ENSORLG00000027557	thumpd1	86	50.183	ENSCANG00000038770	THUMPD1	72	55.556	Colobus_angolensis_palliatus
ENSORLG00000027557	thumpd1	99	53.094	ENSCGRG00001014829	Thumpd1	69	62.397	Cricetulus_griseus_chok1gshd
ENSORLG00000027557	thumpd1	87	57.249	ENSCGRG00000000060	Thumpd1	69	62.397	Cricetulus_griseus_crigri
ENSORLG00000027557	thumpd1	99	72.459	ENSCSEG00000002041	thumpd1	84	80.843	Cynoglossus_semilaevis
ENSORLG00000027557	thumpd1	86	81.273	ENSCVAG00000014960	thumpd1	83	81.273	Cyprinodon_variegatus
ENSORLG00000027557	thumpd1	83	59.608	ENSDARG00000100264	thumpd1	73	59.608	Danio_rerio
ENSORLG00000027557	thumpd1	83	59.542	ENSDNOG00000043510	THUMPD1	73	59.542	Dasypus_novemcinctus
ENSORLG00000027557	thumpd1	76	62.185	ENSDORG00000028216	Thumpd1	67	61.345	Dipodomys_ordii
ENSORLG00000027557	thumpd1	89	31.293	FBgn0035532	CG15014	98	30.864	Drosophila_melanogaster
ENSORLG00000027557	thumpd1	82	55.686	ENSETEG00000002763	THUMPD1	60	55.686	Echinops_telfairi
ENSORLG00000027557	thumpd1	83	43.182	ENSEBUG00000011011	THUMPD1	71	43.182	Eptatretus_burgeri
ENSORLG00000027557	thumpd1	97	53.035	ENSECAG00000005354	THUMPD1	73	59.459	Equus_caballus
ENSORLG00000027557	thumpd1	84	59.245	ENSEEUG00000011256	THUMPD1	63	59.245	Erinaceus_europaeus
ENSORLG00000027557	thumpd1	85	74.905	ENSELUG00000013612	thumpd1	62	74.905	Esox_lucius
ENSORLG00000027557	thumpd1	76	61.702	ENSFCAG00000039296	THUMPD1	66	61.702	Felis_catus
ENSORLG00000027557	thumpd1	75	58.475	ENSFALG00000014029	THUMPD1	85	58.475	Ficedula_albicollis
ENSORLG00000027557	thumpd1	91	76.027	ENSFHEG00000013319	thumpd1	84	78.082	Fundulus_heteroclitus
ENSORLG00000027557	thumpd1	96	66.333	ENSGMOG00000003369	thumpd1	87	69.565	Gadus_morhua
ENSORLG00000027557	thumpd1	58	55.114	ENSGALG00000031384	-	63	65.693	Gallus_gallus
ENSORLG00000027557	thumpd1	99	76.282	ENSGAFG00000011000	thumpd1	89	79.443	Gambusia_affinis
ENSORLG00000027557	thumpd1	87	80.970	ENSGACG00000019511	thumpd1	82	80.970	Gasterosteus_aculeatus
ENSORLG00000027557	thumpd1	95	57.143	ENSGAGG00000008225	THUMPD1	80	63.035	Gopherus_agassizii
ENSORLG00000027557	thumpd1	66	49.510	ENSGGOG00000043232	-	63	49.510	Gorilla_gorilla
ENSORLG00000027557	thumpd1	76	62.128	ENSGGOG00000005231	-	54	62.128	Gorilla_gorilla
ENSORLG00000027557	thumpd1	96	76.144	ENSHBUG00000017996	thumpd1	99	76.250	Haplochromis_burtoni
ENSORLG00000027557	thumpd1	76	64.103	ENSHGLG00000011001	-	66	64.103	Heterocephalus_glaber_female
ENSORLG00000027557	thumpd1	76	64.103	ENSHGLG00100016023	THUMPD1	66	64.103	Heterocephalus_glaber_male
ENSORLG00000027557	thumpd1	88	63.704	ENSHCOG00000008618	thumpd1	59	63.704	Hippocampus_comes
ENSORLG00000027557	thumpd1	75	63.319	ENSIPUG00000012500	thumpd1	62	61.004	Ictalurus_punctatus
ENSORLG00000027557	thumpd1	90	56.890	ENSSTOG00000007011	THUMPD1	69	61.728	Ictidomys_tridecemlineatus
ENSORLG00000027557	thumpd1	82	56.863	ENSJJAG00000004295	-	72	56.863	Jaculus_jaculus
ENSORLG00000027557	thumpd1	84	63.498	ENSKMAG00000009545	thumpd1	64	65.900	Kryptolebias_marmoratus
ENSORLG00000027557	thumpd1	99	73.668	ENSLBEG00000009349	thumpd1	98	73.668	Labrus_bergylta
ENSORLG00000027557	thumpd1	82	61.131	ENSLACG00000005833	THUMPD1	77	61.131	Latimeria_chalumnae
ENSORLG00000027557	thumpd1	85	65.283	ENSLOCG00000000854	thumpd1	84	65.660	Lepisosteus_oculatus
ENSORLG00000027557	thumpd1	98	53.055	ENSLAFG00000025838	THUMPD1	78	55.674	Loxodonta_africana
ENSORLG00000027557	thumpd1	90	55.830	ENSMFAG00000036996	THUMPD1	67	62.553	Macaca_fascicularis
ENSORLG00000027557	thumpd1	72	53.070	ENSMFAG00000041474	-	72	53.070	Macaca_fascicularis
ENSORLG00000027557	thumpd1	72	53.070	ENSMMUG00000038414	-	72	53.070	Macaca_mulatta
ENSORLG00000027557	thumpd1	90	55.830	ENSMMUG00000004225	THUMPD1	67	62.553	Macaca_mulatta
ENSORLG00000027557	thumpd1	72	53.070	ENSMNEG00000038856	-	72	53.070	Macaca_nemestrina
ENSORLG00000027557	thumpd1	90	55.830	ENSMNEG00000020726	THUMPD1	67	62.553	Macaca_nemestrina
ENSORLG00000027557	thumpd1	72	53.540	ENSMLEG00000030012	-	72	53.540	Mandrillus_leucophaeus
ENSORLG00000027557	thumpd1	90	55.830	ENSMLEG00000036436	THUMPD1	67	62.553	Mandrillus_leucophaeus
ENSORLG00000027557	thumpd1	97	76.221	ENSMAMG00000006858	thumpd1	96	76.527	Mastacembelus_armatus
ENSORLG00000027557	thumpd1	96	76.144	ENSMZEG00005013693	thumpd1	99	76.250	Maylandia_zebra
ENSORLG00000027557	thumpd1	67	59.330	ENSMGAG00000010340	THUMPD1	97	59.901	Meleagris_gallopavo
ENSORLG00000027557	thumpd1	86	59.623	ENSMAUG00000013306	Thumpd1	73	59.623	Mesocricetus_auratus
ENSORLG00000027557	thumpd1	76	63.404	ENSMICG00000038483	-	66	63.404	Microcebus_murinus
ENSORLG00000027557	thumpd1	69	52.093	ENSMICG00000030865	-	61	52.093	Microcebus_murinus
ENSORLG00000027557	thumpd1	87	56.506	ENSMOCG00000003447	Thumpd1	76	56.506	Microtus_ochrogaster
ENSORLG00000027557	thumpd1	88	78.309	ENSMMOG00000011323	thumpd1	81	78.309	Mola_mola
ENSORLG00000027557	thumpd1	97	55.161	ENSMODG00000006971	-	73	60.148	Monodelphis_domestica
ENSORLG00000027557	thumpd1	87	58.824	ENSMODG00000024776	-	74	60.517	Monodelphis_domestica
ENSORLG00000027557	thumpd1	87	82.156	ENSMALG00000019522	thumpd1	87	83.395	Monopterus_albus
ENSORLG00000027557	thumpd1	78	61.983	MGP_CAROLIEiJ_G0030382	Thumpd1	69	61.983	Mus_caroli
ENSORLG00000027557	thumpd1	78	61.983	ENSMUSG00000030942	Thumpd1	69	61.983	Mus_musculus
ENSORLG00000027557	thumpd1	78	62.041	MGP_PahariEiJ_G0013593	Thumpd1	69	62.041	Mus_pahari
ENSORLG00000027557	thumpd1	82	58.661	ENSMLUG00000010547	THUMPD1	71	58.661	Myotis_lucifugus
ENSORLG00000027557	thumpd1	76	63.404	ENSNGAG00000018643	Thumpd1	67	63.404	Nannospalax_galili
ENSORLG00000027557	thumpd1	96	75.244	ENSNBRG00000006987	thumpd1	92	75.710	Neolamprologus_brichardi
ENSORLG00000027557	thumpd1	98	52.396	ENSNLEG00000012369	THUMPD1	75	57.736	Nomascus_leucogenys
ENSORLG00000027557	thumpd1	85	57.414	ENSODEG00000012360	THUMPD1	66	61.966	Octodon_degus
ENSORLG00000027557	thumpd1	93	78.547	ENSONIG00000000146	thumpd1	95	83.456	Oreochromis_niloticus
ENSORLG00000027557	thumpd1	93	56.701	ENSOANG00000014297	THUMPD1	74	59.259	Ornithorhynchus_anatinus
ENSORLG00000027557	thumpd1	83	59.615	ENSOCUG00000009895	-	74	59.615	Oryctolagus_cuniculus
ENSORLG00000027557	thumpd1	100	99.023	ENSORLG00020010206	thumpd1	100	99.023	Oryzias_latipes_hni
ENSORLG00000027557	thumpd1	100	97.720	ENSORLG00015009581	thumpd1	100	97.720	Oryzias_latipes_hsok
ENSORLG00000027557	thumpd1	100	84.356	ENSOMEG00000019361	thumpd1	100	85.890	Oryzias_melastigma
ENSORLG00000027557	thumpd1	90	56.184	ENSOGAG00000026723	THUMPD1	66	62.128	Otolemur_garnettii
ENSORLG00000027557	thumpd1	82	59.144	ENSOARG00000013107	THUMPD1	71	59.144	Ovis_aries
ENSORLG00000027557	thumpd1	84	57.358	ENSPPAG00000033818	-	54	61.702	Pan_paniscus
ENSORLG00000027557	thumpd1	73	53.333	ENSPPAG00000001653	-	68	53.333	Pan_paniscus
ENSORLG00000027557	thumpd1	76	62.553	ENSPPRG00000014118	-	66	62.553	Panthera_pardus
ENSORLG00000027557	thumpd1	89	55.208	ENSPTIG00000013856	-	80	55.594	Panthera_tigris_altaica
ENSORLG00000027557	thumpd1	84	57.358	ENSPTRG00000007848	THUMPD1	54	61.702	Pan_troglodytes
ENSORLG00000027557	thumpd1	70	50.926	ENSPTRG00000046073	-	64	50.926	Pan_troglodytes
ENSORLG00000027557	thumpd1	90	55.830	ENSPANG00000025507	THUMPD1	67	62.553	Papio_anubis
ENSORLG00000027557	thumpd1	72	53.509	ENSPANG00000034881	-	72	53.509	Papio_anubis
ENSORLG00000027557	thumpd1	90	63.538	ENSPKIG00000014491	thumpd1	85	63.538	Paramormyrops_kingsleyae
ENSORLG00000027557	thumpd1	86	59.701	ENSPSIG00000012430	THUMPD1	92	59.925	Pelodiscus_sinensis
ENSORLG00000027557	thumpd1	82	75.194	ENSPMGG00000014479	thumpd1	90	75.194	Periophthalmus_magnuspinnatus
ENSORLG00000027557	thumpd1	51	44.586	ENSPEMG00000002608	-	62	45.223	Peromyscus_maniculatus_bairdii
ENSORLG00000027557	thumpd1	67	46.829	ENSPMAG00000001389	thumpd1	85	50.000	Petromyzon_marinus
ENSORLG00000027557	thumpd1	76	64.407	ENSPCIG00000029241	THUMPD1	51	61.004	Phascolarctos_cinereus
ENSORLG00000027557	thumpd1	99	76.358	ENSPFOG00000012649	thumpd1	97	76.358	Poecilia_formosa
ENSORLG00000027557	thumpd1	99	75.962	ENSPLAG00000000137	thumpd1	97	75.962	Poecilia_latipinna
ENSORLG00000027557	thumpd1	99	76.603	ENSPMEG00000007750	thumpd1	97	76.603	Poecilia_mexicana
ENSORLG00000027557	thumpd1	84	80.443	ENSPREG00000000144	thumpd1	92	79.853	Poecilia_reticulata
ENSORLG00000027557	thumpd1	60	62.842	ENSPPYG00000007160	-	66	62.842	Pongo_abelii
ENSORLG00000027557	thumpd1	61	62.766	ENSPCAG00000001534	THUMPD1	66	62.766	Procavia_capensis
ENSORLG00000027557	thumpd1	76	63.404	ENSPCOG00000024663	THUMPD1	66	63.404	Propithecus_coquereli
ENSORLG00000027557	thumpd1	76	60.000	ENSPVAG00000005659	-	65	60.000	Pteropus_vampyrus
ENSORLG00000027557	thumpd1	96	76.144	ENSPNYG00000007061	thumpd1	98	76.250	Pundamilia_nyererei
ENSORLG00000027557	thumpd1	83	66.148	ENSPNAG00000024872	thumpd1	84	66.926	Pygocentrus_nattereri
ENSORLG00000027557	thumpd1	76	62.553	ENSRBIG00000040752	THUMPD1	67	62.553	Rhinopithecus_bieti
ENSORLG00000027557	thumpd1	72	57.399	ENSRBIG00000040136	-	75	57.399	Rhinopithecus_bieti
ENSORLG00000027557	thumpd1	72	56.951	ENSRROG00000045699	-	75	56.951	Rhinopithecus_roxellana
ENSORLG00000027557	thumpd1	76	62.553	ENSRROG00000042189	THUMPD1	67	62.553	Rhinopithecus_roxellana
ENSORLG00000027557	thumpd1	84	58.271	ENSSBOG00000034246	THUMPD1	75	58.271	Saimiri_boliviensis_boliviensis
ENSORLG00000027557	thumpd1	93	57.732	ENSSHAG00000003853	THUMPD1	71	62.745	Sarcophilus_harrisii
ENSORLG00000027557	thumpd1	95	54.452	ENSSFOG00015007512	thumpd1	82	57.407	Scleropages_formosus
ENSORLG00000027557	thumpd1	99	73.765	ENSSMAG00000000723	thumpd1	86	82.270	Scophthalmus_maximus
ENSORLG00000027557	thumpd1	96	78.548	ENSSDUG00000014502	thumpd1	90	83.045	Seriola_dumerili
ENSORLG00000027557	thumpd1	96	77.888	ENSSLDG00000007694	thumpd1	90	82.353	Seriola_lalandi_dorsalis
ENSORLG00000027557	thumpd1	95	54.902	ENSSPUG00000005096	THUMPD1	79	62.016	Sphenodon_punctatus
ENSORLG00000027557	thumpd1	99	78.413	ENSSPAG00000006993	thumpd1	98	80.000	Stegastes_partitus
ENSORLG00000027557	thumpd1	76	62.712	ENSSSCG00000024748	THUMPD1	66	62.712	Sus_scrofa
ENSORLG00000027557	thumpd1	80	60.714	ENSTGUG00000009247	THUMPD1	91	60.714	Taeniopygia_guttata
ENSORLG00000027557	thumpd1	100	75.484	ENSTRUG00000015656	thumpd1	82	83.774	Takifugu_rubripes
ENSORLG00000027557	thumpd1	95	75.000	ENSTNIG00000001584	thumpd1	88	81.648	Tetraodon_nigroviridis
ENSORLG00000027557	thumpd1	97	53.115	ENSTBEG00000005252	THUMPD1	76	52.787	Tupaia_belangeri
ENSORLG00000027557	thumpd1	76	63.404	ENSTTRG00000016435	THUMPD1	66	63.404	Tursiops_truncatus
ENSORLG00000027557	thumpd1	82	59.922	ENSVPAG00000003422	THUMPD1	73	59.922	Vicugna_pacos
ENSORLG00000027557	thumpd1	76	62.128	ENSVVUG00000023241	THUMPD1	65	62.128	Vulpes_vulpes
ENSORLG00000027557	thumpd1	60	63.298	ENSXETG00000005539	thumpd1	95	49.821	Xenopus_tropicalis
ENSORLG00000027557	thumpd1	52	76.687	ENSXCOG00000016003	thumpd1	88	76.074	Xiphophorus_couchianus
ENSORLG00000027557	thumpd1	91	79.443	ENSXMAG00000026052	thumpd1	97	76.282	Xiphophorus_maculatus