EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027669 (Gene tree)
Gene ID: 101168376
Gene Symbol: RAB41
Alias: -
Full Name: ras-related protein Rab-6B
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 12452 bases
Position: chr10:11237691-11250142
Accession: 101168376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000036984	MMR_HSR1	PF01926.23	8.8e-05	1	1
ENSORLP00000036989	MMR_HSR1	PF01926.23	0.00012	1	1
ENSORLP00000040520	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046827	RAB41-201	4107	XM_004073116	ENSORLP00000036989	211 (aa)	XP_004073164	UPI0002A4CD0C
ENSORLT00000040920	RAB41-203	4107	XM_004073118	ENSORLP00000036984	211 (aa)	XP_004073166	UPI0002A48E2F
ENSORLT00000032565	RAB41-202	4107	XM_004073117	ENSORLP00000040520	211 (aa)	XP_004073165	H2L8X5

Gene Model

Click here to download ENSORLG00000027669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027669	RAB41	76	37.888	ENSORLG00000012158	rab25a	76	37.888
ENSORLG00000027669	RAB41	70	42.953	ENSORLG00000030642	zgc:101559	64	42.953
ENSORLG00000027669	RAB41	91	35.176	ENSORLG00000001098	si:dkey-16l2.16	94	35.176
ENSORLG00000027669	RAB41	91	37.379	ENSORLG00000030109	rab33ba	83	37.379
ENSORLG00000027669	RAB41	81	34.857	ENSORLG00000003681	rheb	93	34.857
ENSORLG00000027669	RAB41	74	33.544	ENSORLG00000018912	hrasb	83	33.544
ENSORLG00000027669	RAB41	80	41.573	ENSORLG00000024558	-	76	41.573
ENSORLG00000027669	RAB41	79	39.306	ENSORLG00000004624	rab18a	83	39.306
ENSORLG00000027669	RAB41	83	30.508	ENSORLG00000018119	si:ch73-116o1.2	84	30.337
ENSORLG00000027669	RAB41	79	41.520	ENSORLG00000009609	rab18b	83	41.520
ENSORLG00000027669	RAB41	74	32.051	ENSORLG00000009874	rabl2	67	32.051
ENSORLG00000027669	RAB41	77	42.262	ENSORLG00000014099	si:dkey-34d22.5	76	42.262
ENSORLG00000027669	RAB41	74	36.943	ENSORLG00000018331	RAB11A	73	36.943
ENSORLG00000027669	RAB41	74	39.623	ENSORLG00000001850	RAB39B	75	39.623
ENSORLG00000027669	RAB41	90	38.947	ENSORLG00000010846	rab15	87	38.947
ENSORLG00000027669	RAB41	92	37.500	ENSORLG00000029090	-	96	37.500
ENSORLG00000027669	RAB41	69	41.096	ENSORLG00000010115	rab23	73	41.333
ENSORLG00000027669	RAB41	75	38.994	ENSORLG00000003902	rab12	66	39.623
ENSORLG00000027669	RAB41	75	38.509	ENSORLG00000004394	rab34a	61	38.509
ENSORLG00000027669	RAB41	74	32.911	ENSORLG00000024443	zgc:55558	84	32.911
ENSORLG00000027669	RAB41	73	39.490	ENSORLG00000022335	rab42a	72	39.490
ENSORLG00000027669	RAB41	74	42.038	ENSORLG00000024116	RAB15	75	42.038
ENSORLG00000027669	RAB41	92	39.000	ENSORLG00000028104	rab1ab	96	39.000
ENSORLG00000027669	RAB41	74	37.580	ENSORLG00000015307	rab11ba	72	37.580
ENSORLG00000027669	RAB41	92	37.688	ENSORLG00000013432	rab2a	91	37.688
ENSORLG00000027669	RAB41	74	38.217	ENSORLG00000015284	-	52	38.217
ENSORLG00000027669	RAB41	83	33.889	ENSORLG00000001566	rhebl1	97	33.889
ENSORLG00000027669	RAB41	92	37.000	ENSORLG00000001351	-	96	37.000
ENSORLG00000027669	RAB41	82	32.022	ENSORLG00000025519	rras	90	32.022
ENSORLG00000027669	RAB41	74	40.252	ENSORLG00000008345	-	75	40.252
ENSORLG00000027669	RAB41	73	39.610	ENSORLG00000028885	rab35b	76	39.610
ENSORLG00000027669	RAB41	75	39.873	ENSORLG00000007406	rab14	73	39.873
ENSORLG00000027669	RAB41	92	38.308	ENSORLG00000021846	-	96	38.308
ENSORLG00000027669	RAB41	74	32.911	ENSORLG00000024102	kras	83	32.911
ENSORLG00000027669	RAB41	83	34.270	ENSORLG00000025819	-	96	34.270
ENSORLG00000027669	RAB41	81	31.818	ENSORLG00000027892	RAB29	86	31.818
ENSORLG00000027669	RAB41	76	37.278	ENSORLG00000006628	-	80	37.278
ENSORLG00000027669	RAB41	96	87.619	ENSORLG00000000937	-	98	87.619
ENSORLG00000027669	RAB41	75	41.139	ENSORLG00000029921	-	73	41.139
ENSORLG00000027669	RAB41	98	89.372	ENSORLG00000026197	rab6a	99	89.372
ENSORLG00000027669	RAB41	75	38.889	ENSORLG00000025098	si:dkey-13a21.4	79	38.889
ENSORLG00000027669	RAB41	76	43.478	ENSORLG00000029812	rab30	79	43.478
ENSORLG00000027669	RAB41	76	36.646	ENSORLG00000016126	rab11al	75	36.646
ENSORLG00000027669	RAB41	75	38.509	ENSORLG00000003119	rab34b	59	38.509
ENSORLG00000027669	RAB41	76	39.752	ENSORLG00000000602	zgc:171927	76	39.752
ENSORLG00000027669	RAB41	70	40.909	ENSORLG00000002071	-	63	41.176
ENSORLG00000027669	RAB41	93	39.409	ENSORLG00000030566	rab33a	72	38.462
ENSORLG00000027669	RAB41	82	42.529	ENSORLG00000003882	rab5c	80	42.529
ENSORLG00000027669	RAB41	72	32.919	ENSORLG00000026940	rasl11a	63	32.919
ENSORLG00000027669	RAB41	84	43.503	ENSORLG00000012261	rab5aa	82	43.503
ENSORLG00000027669	RAB41	98	86.957	ENSORLG00000016290	rab6bb	99	86.957
ENSORLG00000027669	RAB41	74	37.580	ENSORLG00000013938	rab11bb	72	37.580
ENSORLG00000027669	RAB41	74	43.949	ENSORLG00000016555	rab3db	75	43.949
ENSORLG00000027669	RAB41	97	34.884	ENSORLG00000006405	rab9b	98	34.884
ENSORLG00000027669	RAB41	93	34.010	ENSORLG00000016135	rab25b	98	33.161
ENSORLG00000027669	RAB41	75	44.937	ENSORLG00000025395	-	79	44.937
ENSORLG00000027669	RAB41	87	35.354	ENSORLG00000017806	rab9a	93	35.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027669	RAB41	100	99.052	ENSACIG00000010914	RAB41	100	99.052	Amphilophus_citrinellus
ENSORLG00000027669	RAB41	100	99.052	ENSAOCG00000022426	RAB41	100	99.052	Amphiprion_ocellaris
ENSORLG00000027669	RAB41	100	99.052	ENSAPEG00000007931	RAB41	100	99.052	Amphiprion_percula
ENSORLG00000027669	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSORLG00000027669	RAB41	93	67.005	ENSCATG00000037380	RAB41	87	67.005	Cercocebus_atys
ENSORLG00000027669	RAB41	100	95.261	ENSCPBG00000014340	RAB41	100	95.261	Chrysemys_picta_bellii
ENSORLG00000027669	RAB41	100	99.052	ENSFHEG00000015996	RAB41	100	99.052	Fundulus_heteroclitus
ENSORLG00000027669	RAB41	100	99.052	ENSHBUG00000014338	RAB41	100	99.052	Haplochromis_burtoni
ENSORLG00000027669	RAB41	100	99.052	ENSLBEG00000008746	RAB41	100	99.052	Labrus_bergylta
ENSORLG00000027669	RAB41	93	68.528	ENSMFAG00000000762	RAB41	87	68.528	Macaca_fascicularis
ENSORLG00000027669	RAB41	93	68.528	ENSMMUG00000013937	RAB41	87	68.528	Macaca_mulatta
ENSORLG00000027669	RAB41	93	68.020	ENSMNEG00000045569	RAB41	87	68.020	Macaca_nemestrina
ENSORLG00000027669	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSORLG00000027669	RAB41	100	98.585	ENSONIG00000002774	RAB41	100	98.585	Oreochromis_niloticus
ENSORLG00000027669	RAB41	100	100.000	ENSORLG00015010161	RAB41	100	100.000	Oryzias_latipes_hsok
ENSORLG00000027669	RAB41	100	99.052	ENSOMEG00000017258	RAB41	100	99.052	Oryzias_melastigma
ENSORLG00000027669	RAB41	93	68.020	ENSPANG00000007317	RAB41	87	68.020	Papio_anubis
ENSORLG00000027669	RAB41	99	93.780	ENSPKIG00000014618	-	99	93.780	Paramormyrops_kingsleyae
ENSORLG00000027669	RAB41	100	99.052	ENSPMGG00000017830	RAB41	100	99.052	Periophthalmus_magnuspinnatus
ENSORLG00000027669	RAB41	100	99.052	ENSPFOG00000011424	RAB41	100	99.052	Poecilia_formosa
ENSORLG00000027669	RAB41	100	99.052	ENSPREG00000009535	RAB41	100	99.052	Poecilia_reticulata
ENSORLG00000027669	RAB41	93	68.528	ENSRBIG00000027991	RAB41	87	68.528	Rhinopithecus_bieti
ENSORLG00000027669	RAB41	99	97.608	ENSSFOG00015011268	RAB41	99	97.608	Scleropages_formosus
ENSORLG00000027669	RAB41	100	97.196	ENSTNIG00000016831	RAB41	100	97.196	Tetraodon_nigroviridis
ENSORLG00000027669	RAB41	99	95.215	ENSXETG00000030938	rab41	99	95.215	Xenopus_tropicalis
ENSORLG00000027669	RAB41	100	99.052	ENSXCOG00000015802	RAB41	100	99.052	Xiphophorus_couchianus
ENSORLG00000027669	RAB41	100	99.052	ENSXMAG00000027787	RAB41	100	99.052	Xiphophorus_maculatus