EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027691 (Gene tree)
Gene ID: 101163355
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 11512 bases
Position: chr16:12621741-12633252
Accession: 101163355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000029977	PAP_assoc	PF03828.19	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000036168	-	6917	XM_004078021	ENSORLP00000029977	779 (aa)	XP_004078069	UPI0002A49E91

Gene Model

Click here to download ENSORLG00000027691's gene model file

Pathways

Pathway ID	Pathway Name	Source
ola03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027691	-	68	48.972	ENSORLG00000013989	tent4b	73	48.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027691	-	99	67.372	ENSAPOG00000018106	-	99	67.746	Acanthochromis_polyacanthus
ENSORLG00000027691	-	54	65.893	ENSAPOG00000002178	tent4a	53	66.826	Acanthochromis_polyacanthus
ENSORLG00000027691	-	70	51.742	ENSAMEG00000002806	TENT4A	99	51.478	Ailuropoda_melanoleuca
ENSORLG00000027691	-	53	59.338	ENSACIG00000013326	tent4a	71	64.655	Amphilophus_citrinellus
ENSORLG00000027691	-	74	61.681	ENSACIG00000014234	-	90	60.980	Amphilophus_citrinellus
ENSORLG00000027691	-	54	65.429	ENSAOCG00000019251	tent4a	50	66.348	Amphiprion_ocellaris
ENSORLG00000027691	-	99	67.118	ENSAOCG00000013501	-	99	67.611	Amphiprion_ocellaris
ENSORLG00000027691	-	54	65.197	ENSAPEG00000002703	tent4a	81	71.637	Amphiprion_percula
ENSORLG00000027691	-	99	67.445	ENSAPEG00000015522	-	99	68.059	Amphiprion_percula
ENSORLG00000027691	-	99	68.350	ENSATEG00000024197	-	99	67.980	Anabas_testudineus
ENSORLG00000027691	-	70	52.952	ENSACAG00000000497	TENT4A	99	52.952	Anolis_carolinensis
ENSORLG00000027691	-	99	63.305	ENSACLG00000016812	-	99	63.305	Astatotilapia_calliptera
ENSORLG00000027691	-	54	63.309	ENSACLG00000014408	tent4a	75	64.198	Astatotilapia_calliptera
ENSORLG00000027691	-	55	63.719	ENSAMXG00000017691	tent4a	55	62.316	Astyanax_mexicanus
ENSORLG00000027691	-	73	54.181	ENSAMXG00000039964	TENT4A	99	46.774	Astyanax_mexicanus
ENSORLG00000027691	-	70	52.174	ENSCAFG00000010319	TENT4A	99	51.910	Canis_familiaris
ENSORLG00000027691	-	70	52.174	ENSCAFG00020022835	TENT4A	99	51.910	Canis_lupus_dingo
ENSORLG00000027691	-	70	52.297	ENSCHIG00000017328	TENT4A	99	51.504	Capra_hircus
ENSORLG00000027691	-	73	54.068	ENSCPBG00000006514	TENT4A	81	50.228	Chrysemys_picta_bellii
ENSORLG00000027691	-	99	68.697	ENSCSEG00000003887	-	99	68.575	Cynoglossus_semilaevis
ENSORLG00000027691	-	57	62.500	ENSCSEG00000011470	tent4a	55	63.063	Cynoglossus_semilaevis
ENSORLG00000027691	-	75	50.635	ENSCVAG00000021741	tent4a	80	50.741	Cyprinodon_variegatus
ENSORLG00000027691	-	58	86.901	ENSCVAG00000008463	-	97	86.901	Cyprinodon_variegatus
ENSORLG00000027691	-	54	66.667	ENSDARG00000062114	tent4a	99	53.459	Danio_rerio
ENSORLG00000027691	-	70	52.539	ENSEASG00005018583	TENT4A	99	52.356	Equus_asinus_asinus
ENSORLG00000027691	-	78	51.633	ENSECAG00000010134	TENT4A	78	51.145	Equus_caballus
ENSORLG00000027691	-	57	64.286	ENSELUG00000024141	tent4a	71	71.154	Esox_lucius
ENSORLG00000027691	-	80	50.615	ENSFCAG00000003474	TENT4A	78	50.307	Felis_catus
ENSORLG00000027691	-	75	48.503	ENSFHEG00000017843	tent4a	51	64.200	Fundulus_heteroclitus
ENSORLG00000027691	-	99	65.087	ENSFHEG00000006086	-	99	64.589	Fundulus_heteroclitus
ENSORLG00000027691	-	99	66.543	ENSGAFG00000000179	-	99	66.543	Gambusia_affinis
ENSORLG00000027691	-	54	62.830	ENSHBUG00000022127	tent4a	99	48.704	Haplochromis_burtoni
ENSORLG00000027691	-	99	63.548	ENSHBUG00000001038	-	99	63.548	Haplochromis_burtoni
ENSORLG00000027691	-	56	87.540	ENSHCOG00000000915	-	90	87.540	Hippocampus_comes
ENSORLG00000027691	-	73	53.512	ENSIPUG00000000878	-	54	66.038	Ictalurus_punctatus
ENSORLG00000027691	-	58	64.474	ENSIPUG00000014941	tent4a	68	65.035	Ictalurus_punctatus
ENSORLG00000027691	-	99	66.747	ENSKMAG00000019925	-	100	66.989	Kryptolebias_marmoratus
ENSORLG00000027691	-	75	48.792	ENSKMAG00000000725	tent4a	82	69.883	Kryptolebias_marmoratus
ENSORLG00000027691	-	99	67.551	ENSLBEG00000021596	-	99	67.551	Labrus_bergylta
ENSORLG00000027691	-	81	54.186	ENSLOCG00000008727	tent4a	99	48.148	Lepisosteus_oculatus
ENSORLG00000027691	-	99	66.504	ENSMAMG00000024030	-	99	66.544	Mastacembelus_armatus
ENSORLG00000027691	-	99	63.062	ENSMZEG00005001805	-	99	63.062	Maylandia_zebra
ENSORLG00000027691	-	54	63.146	ENSMZEG00005000080	tent4a	72	50.311	Maylandia_zebra
ENSORLG00000027691	-	54	64.286	ENSMMOG00000021181	tent4a	78	65.196	Mola_mola
ENSORLG00000027691	-	58	82.132	ENSMMOG00000008539	-	98	82.132	Mola_mola
ENSORLG00000027691	-	78	52.418	ENSMODG00000002052	TENT4A	69	52.418	Monodelphis_domestica
ENSORLG00000027691	-	62	63.717	ENSMALG00000002692	tent4a	61	64.545	Monopterus_albus
ENSORLG00000027691	-	82	70.437	ENSMALG00000018694	-	98	69.683	Monopterus_albus
ENSORLG00000027691	-	70	51.826	ENSMPUG00000007530	TENT4A	56	74.426	Mustela_putorius_furo
ENSORLG00000027691	-	70	51.773	ENSMLUG00000004424	TENT4A	99	51.323	Myotis_lucifugus
ENSORLG00000027691	-	71	60.644	ENSNBRG00000009218	TENT4A	62	84.665	Neolamprologus_brichardi
ENSORLG00000027691	-	50	46.253	ENSMEUG00000004007	TENT4A	71	47.647	Notamacropus_eugenii
ENSORLG00000027691	-	70	54.417	ENSOANG00000011579	-	99	54.417	Ornithorhynchus_anatinus
ENSORLG00000027691	-	81	50.363	ENSORLG00020019731	tent4a	99	44.614	Oryzias_latipes_hni
ENSORLG00000027691	-	100	98.331	ENSORLG00020022661	-	100	98.331	Oryzias_latipes_hni
ENSORLG00000027691	-	100	93.465	ENSORLG00015006327	-	100	93.465	Oryzias_latipes_hsok
ENSORLG00000027691	-	75	53.084	ENSOMEG00000013540	tent4a	67	53.311	Oryzias_melastigma
ENSORLG00000027691	-	58	92.971	ENSOMEG00000014052	-	99	92.971	Oryzias_melastigma
ENSORLG00000027691	-	70	52.465	ENSOARG00000014904	TENT4A	99	51.675	Ovis_aries
ENSORLG00000027691	-	70	52.028	ENSPPRG00000002409	TENT4A	99	51.404	Panthera_pardus
ENSORLG00000027691	-	57	60.435	ENSPTRG00000016717	TENT4A	65	60.759	Pan_troglodytes
ENSORLG00000027691	-	99	47.246	ENSPKIG00000020499	-	99	46.731	Paramormyrops_kingsleyae
ENSORLG00000027691	-	79	52.978	ENSPKIG00000024130	tent4a	85	53.990	Paramormyrops_kingsleyae
ENSORLG00000027691	-	70	51.327	ENSPSIG00000015964	TENT4A	99	50.796	Pelodiscus_sinensis
ENSORLG00000027691	-	54	65.155	ENSPMGG00000004132	tent4a	67	66.339	Periophthalmus_magnuspinnatus
ENSORLG00000027691	-	74	72.879	ENSPMGG00000007999	TENT4A	98	89.457	Periophthalmus_magnuspinnatus
ENSORLG00000027691	-	78	52.886	ENSPCIG00000017056	TENT4A	70	52.574	Phascolarctos_cinereus
ENSORLG00000027691	-	99	67.450	ENSPFOG00000016762	-	99	67.450	Poecilia_formosa
ENSORLG00000027691	-	75	49.315	ENSPFOG00000003961	tent4a	81	51.017	Poecilia_formosa
ENSORLG00000027691	-	75	49.242	ENSPLAG00000007134	tent4a	77	50.235	Poecilia_latipinna
ENSORLG00000027691	-	57	90.714	ENSPLAG00000004468	TENT4A	99	90.714	Poecilia_latipinna
ENSORLG00000027691	-	57	62.031	ENSPMEG00000006428	tent4a	53	63.039	Poecilia_mexicana
ENSORLG00000027691	-	99	66.750	ENSPMEG00000009954	-	99	66.750	Poecilia_mexicana
ENSORLG00000027691	-	54	63.744	ENSPREG00000017547	tent4a	75	64.878	Poecilia_reticulata
ENSORLG00000027691	-	99	57.842	ENSPREG00000011257	TENT4A	99	69.962	Poecilia_reticulata
ENSORLG00000027691	-	70	52.381	ENSPVAG00000000511	TENT4A	99	51.557	Pteropus_vampyrus
ENSORLG00000027691	-	57	80.511	ENSPNYG00000008164	TENT4A	95	80.511	Pundamilia_nyererei
ENSORLG00000027691	-	54	63.007	ENSPNYG00000010769	tent4a	99	48.704	Pundamilia_nyererei
ENSORLG00000027691	-	73	55.294	ENSPNAG00000011603	TENT4A	77	53.958	Pygocentrus_nattereri
ENSORLG00000027691	-	61	61.680	ENSPNAG00000026563	tent4a	83	51.543	Pygocentrus_nattereri
ENSORLG00000027691	-	70	53.765	ENSSHAG00000012100	TENT4A	99	53.765	Sarcophilus_harrisii
ENSORLG00000027691	-	53	67.225	ENSSFOG00015001756	tent4a	85	68.227	Scleropages_formosus
ENSORLG00000027691	-	54	65.228	ENSSMAG00000020671	tent4a	68	65.764	Scophthalmus_maximus
ENSORLG00000027691	-	57	89.457	ENSSMAG00000003989	-	99	89.457	Scophthalmus_maximus
ENSORLG00000027691	-	99	69.816	ENSSDUG00000014825	-	99	69.816	Seriola_dumerili
ENSORLG00000027691	-	99	69.939	ENSSLDG00000019746	-	99	69.939	Seriola_lalandi_dorsalis
ENSORLG00000027691	-	54	65.187	ENSSLDG00000004371	tent4a	76	65.468	Seriola_lalandi_dorsalis
ENSORLG00000027691	-	99	68.305	ENSSPAG00000017401	-	99	68.182	Stegastes_partitus
ENSORLG00000027691	-	54	64.941	ENSSPAG00000003618	tent4a	74	65.860	Stegastes_partitus
ENSORLG00000027691	-	80	50.541	ENSSSCG00000017102	TENT4A	77	50.000	Sus_scrofa
ENSORLG00000027691	-	55	64.399	ENSTRUG00000012098	tent4a	80	70.370	Takifugu_rubripes
ENSORLG00000027691	-	92	69.067	ENSTRUG00000006698	-	98	69.067	Takifugu_rubripes
ENSORLG00000027691	-	70	51.957	ENSTTRG00000012547	TENT4A	99	51.773	Tursiops_truncatus
ENSORLG00000027691	-	77	50.160	ENSUAMG00000024711	TENT4A	99	49.920	Ursus_americanus
ENSORLG00000027691	-	70	51.742	ENSUMAG00000021088	TENT4A	99	51.478	Ursus_maritimus
ENSORLG00000027691	-	70	52.174	ENSVVUG00000017702	TENT4A	99	51.910	Vulpes_vulpes
ENSORLG00000027691	-	54	63.962	ENSXCOG00000002570	tent4a	75	65.111	Xiphophorus_couchianus
ENSORLG00000027691	-	58	82.692	ENSXMAG00000026228	TENT4A	99	82.692	Xiphophorus_maculatus
ENSORLG00000027691	-	67	55.948	ENSXMAG00000013580	tent4a	81	70.760	Xiphophorus_maculatus