EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027739 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 5252 bases
Position: chr16:7710909-7716160
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000026204	RVT_1	PF00078.27	6.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000046690	-	972	-	ENSORLP00000026204	323 (aa)	-	-

Gene Model

Click here to download ENSORLG00000027739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027739	-	84	31.636	ENSORLG00000022016	-	51	31.636
ENSORLG00000027739	-	90	32.653	ENSORLG00000028706	-	55	32.609
ENSORLG00000027739	-	89	32.646	ENSORLG00000030126	-	62	33.456
ENSORLG00000027739	-	89	32.990	ENSORLG00000023700	-	56	33.824
ENSORLG00000027739	-	89	32.990	ENSORLG00000028858	-	64	33.824
ENSORLG00000027739	-	92	32.776	ENSORLG00000024329	-	51	33.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027739	-	84	30.686	ENSACLG00000005315	-	60	30.686	Astatotilapia_calliptera
ENSORLG00000027739	-	86	31.228	ENSACLG00000019432	-	62	31.228	Astatotilapia_calliptera
ENSORLG00000027739	-	89	30.479	ENSCVAG00000009961	-	54	32.000	Cyprinodon_variegatus
ENSORLG00000027739	-	88	31.959	ENSFHEG00000014931	-	53	32.258	Fundulus_heteroclitus
ENSORLG00000027739	-	92	31.148	ENSHBUG00000015481	-	69	32.364	Haplochromis_burtoni
ENSORLG00000027739	-	76	32.937	ENSLBEG00000015744	-	87	33.058	Labrus_bergylta
ENSORLG00000027739	-	54	33.520	ENSLBEG00000023571	-	57	33.520	Labrus_bergylta
ENSORLG00000027739	-	72	34.310	ENSLBEG00000022922	-	74	34.498	Labrus_bergylta
ENSORLG00000027739	-	75	30.120	ENSMMOG00000014893	-	75	31.222	Mola_mola
ENSORLG00000027739	-	67	86.636	ENSORLG00020022530	-	91	86.636	Oryzias_latipes_hni
ENSORLG00000027739	-	75	31.557	ENSPKIG00000025567	-	55	31.557	Paramormyrops_kingsleyae
ENSORLG00000027739	-	84	33.455	ENSPKIG00000004060	-	64	33.455	Paramormyrops_kingsleyae
ENSORLG00000027739	-	96	31.111	ENSPKIG00000013191	-	59	32.491	Paramormyrops_kingsleyae
ENSORLG00000027739	-	97	31.889	ENSPFOG00000024165	-	73	31.988	Poecilia_formosa
ENSORLG00000027739	-	50	34.756	ENSPMEG00000016120	-	68	34.756	Poecilia_mexicana
ENSORLG00000027739	-	75	32.245	ENSPREG00000004798	-	71	33.971	Poecilia_reticulata
ENSORLG00000027739	-	84	32.130	ENSPNYG00000005142	-	58	32.130	Pundamilia_nyererei
ENSORLG00000027739	-	94	30.000	ENSPNAG00000027547	-	56	30.000	Pygocentrus_nattereri
ENSORLG00000027739	-	83	47.566	ENSXCOG00000007285	-	86	47.566	Xiphophorus_couchianus