EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00000027761 (Gene tree)
Gene ID
101161569
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Nova-1
Gene Type
protein_coding
Species
Oryzias_latipes
Status
putative
Strand
Minus strand
Length
57325 bases
Position
chr13:3771524-3828848
Accession
101161569
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00000030458KH_1PF00013.294.9e-4413
ENSORLP00000030458KH_1PF00013.294.9e-4423
ENSORLP00000030458KH_1PF00013.294.9e-4433
ENSORLP00000040879KH_1PF00013.296.9e-4413
ENSORLP00000040879KH_1PF00013.296.9e-4423
ENSORLP00000040879KH_1PF00013.296.9e-4433
ENSORLP00000028165KH_1PF00013.297.1e-4413
ENSORLP00000028165KH_1PF00013.297.1e-4423
ENSORLP00000028165KH_1PF00013.297.1e-4433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00000027747-4940-ENSORLP00000030458486 (aa)--
ENSORLT00000033980-1595XM_023962071ENSORLP00000040879519 (aa)XP_023817839UPI0009DAD4EA
ENSORLT00000038211-1548-ENSORLP00000028165515 (aa)--
Gene Model
Click here to download ENSORLG00000027761's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027761's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00000027761-9788.050ENSORLG00000000350nova19885.603
ENSORLG00000027761-6538.028ENSORLG00000005176PCBP29638.028
ENSORLG00000027761-6038.806ENSORLG00000000059pcbp39541.892
ENSORLG00000027761-9038.571ENSORLG00000004704hnrpkl5139.062
ENSORLG00000027761-8834.132ENSORLG00000016532igf2bp2b5433.152
ENSORLG00000027761-6139.437ENSORLG00000022739-9341.892
ENSORLG00000027761-5439.062ENSORLG00000005161hnrnpk5639.062
ENSORLG00000027761-6139.437ENSORLG00000012872pcbp29439.437
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00000027761-10076.731ENSG00000139910NOVA110090.826Homo_sapiens
ENSORLG00000027761-10098.844ENSAPOG00000006189-10098.844Acanthochromis_polyacanthus
ENSORLG00000027761-9987.476ENSAPOG00000002171nova19988.283Acanthochromis_polyacanthus
ENSORLG00000027761-10074.615ENSAMEG00000015330NOVA19773.654Ailuropoda_melanoleuca
ENSORLG00000027761-9172.789ENSACIG00000017818nova19877.098Amphilophus_citrinellus
ENSORLG00000027761-10095.534ENSACIG00000007544-10095.534Amphilophus_citrinellus
ENSORLG00000027761-5498.592ENSAOCG00000013373-5798.592Amphiprion_ocellaris
ENSORLG00000027761-9987.476ENSAOCG00000011292nova19987.160Amphiprion_ocellaris
ENSORLG00000027761-9688.508ENSAPEG00000012502nova19988.306Amphiprion_percula
ENSORLG00000027761-9995.303ENSAPEG00000016133-9595.303Amphiprion_percula
ENSORLG00000027761-10095.761ENSATEG00000006500NOVA110095.761Anabas_testudineus
ENSORLG00000027761-9270.470ENSATEG00000017565nova19876.286Anabas_testudineus
ENSORLG00000027761-9675.943ENSAPLG00000008154NOVA110074.764Anas_platyrhynchos
ENSORLG00000027761-9277.186ENSACAG00000000477NOVA110077.350Anolis_carolinensis
ENSORLG00000027761-9281.208ENSANAG00000028004NOVA19979.866Aotus_nancymaae
ENSORLG00000027761-9987.867ENSACLG00000003002nova110086.948Astatotilapia_calliptera
ENSORLG00000027761-10098.844ENSACLG00000018329-10098.844Astatotilapia_calliptera
ENSORLG00000027761-10092.039ENSAMXG00000033604nova210092.039Astyanax_mexicanus
ENSORLG00000027761-10084.913ENSAMXG00000006702nova110084.913Astyanax_mexicanus
ENSORLG00000027761-10076.538ENSBTAG00000002170NOVA110075.385Bos_taurus
ENSORLG00000027761-10076.538ENSCJAG00000039497NOVA110075.385Callithrix_jacchus
ENSORLG00000027761-10076.538ENSCAFG00000029157NOVA110075.385Canis_familiaris
ENSORLG00000027761-5267.553ENSCAFG00020024149-7577.576Canis_lupus_dingo
ENSORLG00000027761-10076.538ENSCHIG00000018944NOVA110075.385Capra_hircus
ENSORLG00000027761-9181.490ENSTSYG00000014033NOVA19975.238Carlito_syrichta
ENSORLG00000027761-9071.496ENSCAPG00000010512NOVA110070.071Cavia_aperea
ENSORLG00000027761-10076.538ENSCPOG00000030872NOVA110075.385Cavia_porcellus
ENSORLG00000027761-10076.538ENSCCAG00000026410NOVA110075.385Cebus_capucinus
ENSORLG00000027761-10076.538ENSCATG00000039944NOVA19977.350Cercocebus_atys
ENSORLG00000027761-9277.282ENSCLAG00000008948NOVA19977.350Chinchilla_lanigera
ENSORLG00000027761-10076.538ENSCSAG00000015814NOVA110075.385Chlorocebus_sabaeus
ENSORLG00000027761-10075.000ENSCHOG00000006617NOVA110073.846Choloepus_hoffmanni
ENSORLG00000027761-10076.538ENSCPBG00000027677NOVA19977.350Chrysemys_picta_bellii
ENSORLG00000027761-10076.731ENSCANG00000023898NOVA110075.577Colobus_angolensis_palliatus
ENSORLG00000027761-10076.538ENSCGRG00001024030Nova110075.385Cricetulus_griseus_chok1gshd
ENSORLG00000027761-9177.564ENSCGRG00000004816Nova19877.350Cricetulus_griseus_crigri
ENSORLG00000027761-9589.201ENSCSEG00000017718nova19984.895Cynoglossus_semilaevis
ENSORLG00000027761-10098.459ENSCSEG00000005887NOVA110098.459Cynoglossus_semilaevis
ENSORLG00000027761-9583.299ENSCVAG00000014373-10079.878Cyprinodon_variegatus
ENSORLG00000027761-8797.399ENSCVAG00000014025NOVA19996.317Cyprinodon_variegatus
ENSORLG00000027761-9886.667ENSCVAG00000011460nova19985.143Cyprinodon_variegatus
ENSORLG00000027761-10087.984ENSDARG00000020178nova19997.403Danio_rerio
ENSORLG00000027761-10092.621ENSDARG00000017673nova210092.621Danio_rerio
ENSORLG00000027761-9676.372ENSDNOG00000034618NOVA110075.179Dasypus_novemcinctus
ENSORLG00000027761-10076.538ENSDORG00000012633Nova110075.385Dipodomys_ordii
ENSORLG00000027761-9170.021ENSETEG00000002159NOVA110069.807Echinops_telfairi
ENSORLG00000027761-9662.963ENSEBUG00000008930NOVA19965.106Eptatretus_burgeri
ENSORLG00000027761-9460.321ENSEBUG00000016201NOVA19957.935Eptatretus_burgeri
ENSORLG00000027761-9675.448ENSEASG00005018649NOVA110074.169Equus_asinus_asinus
ENSORLG00000027761-10076.538ENSECAG00000037301NOVA110075.385Equus_caballus
ENSORLG00000027761-9193.750ENSEEUG00000013658NOVA17993.750Erinaceus_europaeus
ENSORLG00000027761-10088.031ENSELUG00000017375nova110088.031Esox_lucius
ENSORLG00000027761-10092.543ENSELUG00000012346-10092.543Esox_lucius
ENSORLG00000027761-10076.538ENSFCAG00000004226NOVA110075.385Felis_catus
ENSORLG00000027761-10076.538ENSFALG00000005703NOVA110075.385Ficedula_albicollis
ENSORLG00000027761-10075.385ENSFDAG00000007704NOVA110074.423Fukomys_damarensis
ENSORLG00000027761-10098.266ENSFHEG00000020456-10098.266Fundulus_heteroclitus
ENSORLG00000027761-9886.667ENSFHEG00000004626nova19787.424Fundulus_heteroclitus
ENSORLG00000027761-6797.475ENSGMOG00000019162-7494.898Gadus_morhua
ENSORLG00000027761-10086.847ENSGMOG00000011253nova110086.074Gadus_morhua
ENSORLG00000027761-10076.538ENSGALG00000009850NOVA110075.385Gallus_gallus
ENSORLG00000027761-9694.330ENSGAFG00000003656-10094.330Gambusia_affinis
ENSORLG00000027761-9886.497ENSGAFG00000016382nova19886.853Gambusia_affinis
ENSORLG00000027761-9393.677ENSGACG00000012628-10092.211Gasterosteus_aculeatus
ENSORLG00000027761-9986.888ENSGACG00000020175nova110086.180Gasterosteus_aculeatus
ENSORLG00000027761-8777.286ENSGAGG00000007839NOVA19777.286Gopherus_agassizii
ENSORLG00000027761-10076.538ENSGGOG00000016495NOVA110075.385Gorilla_gorilla
ENSORLG00000027761-10098.844ENSHBUG00000002485NOVA110098.844Haplochromis_burtoni
ENSORLG00000027761-9987.500ENSHBUG00000018561nova19987.928Haplochromis_burtoni
ENSORLG00000027761-10076.538ENSHGLG00000003180NOVA110075.385Heterocephalus_glaber_female
ENSORLG00000027761-9676.429ENSHGLG00100000791NOVA19075.238Heterocephalus_glaber_male
ENSORLG00000027761-10085.687ENSHCOG00000008366nova110085.496Hippocampus_comes
ENSORLG00000027761-10096.146ENSHCOG00000019136-10096.146Hippocampus_comes
ENSORLG00000027761-9991.634ENSIPUG00000019551nova210090.476Ictalurus_punctatus
ENSORLG00000027761-10085.985ENSIPUG00000018651nova110083.333Ictalurus_punctatus
ENSORLG00000027761-9277.282ENSSTOG00000020788NOVA19977.350Ictidomys_tridecemlineatus
ENSORLG00000027761-10076.538ENSJJAG00000012915Nova110075.385Jaculus_jaculus
ENSORLG00000027761-5798.113ENSKMAG00000006068-83100.000Kryptolebias_marmoratus
ENSORLG00000027761-5698.630ENSKMAG00000015047-9998.630Kryptolebias_marmoratus
ENSORLG00000027761-10085.135ENSKMAG00000014225nova19984.942Kryptolebias_marmoratus
ENSORLG00000027761-10097.688ENSLBEG00000003511NOVA110097.688Labrus_bergylta
ENSORLG00000027761-9292.617ENSLBEG00000028542nova110085.660Labrus_bergylta
ENSORLG00000027761-10086.990ENSLACG00000015223nova29986.796Latimeria_chalumnae
ENSORLG00000027761-9676.596ENSLACG00000005669NOVA19977.305Latimeria_chalumnae
ENSORLG00000027761-10072.308ENSLOCG00000009727NOVA110074.495Lepisosteus_oculatus
ENSORLG00000027761-10092.293ENSLOCG00000014804nova210092.293Lepisosteus_oculatus
ENSORLG00000027761-10076.538ENSLAFG00000006455NOVA110078.093Loxodonta_africana
ENSORLG00000027761-9879.798ENSMFAG00000035425NOVA110075.385Macaca_fascicularis
ENSORLG00000027761-9880.051ENSMMUG00000004271NOVA110075.385Macaca_mulatta
ENSORLG00000027761-10076.538ENSMNEG00000040302NOVA110075.385Macaca_nemestrina
ENSORLG00000027761-9181.490ENSMLEG00000034714NOVA110080.135Mandrillus_leucophaeus
ENSORLG00000027761-10098.459ENSMAMG00000016281NOVA110098.459Mastacembelus_armatus
ENSORLG00000027761-9987.255ENSMAMG00000021272nova19986.538Mastacembelus_armatus
ENSORLG00000027761-9987.476ENSMZEG00005023362nova19986.590Maylandia_zebra
ENSORLG00000027761-10098.844ENSMZEG00005024407-10098.844Maylandia_zebra
ENSORLG00000027761-9676.123ENSMGAG00000012359NOVA110074.941Meleagris_gallopavo
ENSORLG00000027761-10076.538ENSMICG00000034677NOVA19977.350Microcebus_murinus
ENSORLG00000027761-10076.538ENSMOCG00000006277Nova110075.385Microtus_ochrogaster
ENSORLG00000027761-9695.354ENSMMOG00000005092-9495.354Mola_mola
ENSORLG00000027761-9986.667ENSMMOG00000006066nova110086.476Mola_mola
ENSORLG00000027761-9078.419ENSMODG00000001830NOVA19577.350Monodelphis_domestica
ENSORLG00000027761-9983.594ENSMALG00000005081nova19282.946Monopterus_albus
ENSORLG00000027761-5197.368ENSMALG00000010432-6797.368Monopterus_albus
ENSORLG00000027761-5384.324ENSMALG00000010422-8498.101Monopterus_albus
ENSORLG00000027761-10076.346MGP_CAROLIEiJ_G0017728Nova110075.192Mus_caroli
ENSORLG00000027761-10076.346ENSMUSG00000021047Nova110075.192Mus_musculus
ENSORLG00000027761-10076.346MGP_PahariEiJ_G0029485Nova110075.192Mus_pahari
ENSORLG00000027761-10076.346MGP_SPRETEiJ_G0018570Nova110075.192Mus_spretus
ENSORLG00000027761-10076.538ENSMPUG00000005462NOVA110075.385Mustela_putorius_furo
ENSORLG00000027761-9675.887ENSMLUG00000016716NOVA110074.704Myotis_lucifugus
ENSORLG00000027761-9375.117ENSNGAG00000023231Nova110077.730Nannospalax_galili
ENSORLG00000027761-56100.000ENSNBRG00000016780-7998.649Neolamprologus_brichardi
ENSORLG00000027761-9987.084ENSNBRG00000008100nova19986.207Neolamprologus_brichardi
ENSORLG00000027761-5285.556ENSNBRG00000016812-8598.089Neolamprologus_brichardi
ENSORLG00000027761-10076.538ENSNLEG00000033958NOVA110075.385Nomascus_leucogenys
ENSORLG00000027761-9074.463ENSMEUG00000009112NOVA19867.137Notamacropus_eugenii
ENSORLG00000027761-8176.786ENSOPRG00000007199-6773.756Ochotona_princeps
ENSORLG00000027761-9676.429ENSODEG00000001059NOVA110077.302Octodon_degus
ENSORLG00000027761-9887.476ENSONIG00000015810nova110087.280Oreochromis_niloticus
ENSORLG00000027761-10098.844ENSONIG00000007665NOVA110098.844Oreochromis_niloticus
ENSORLG00000027761-8774.799ENSOANG00000014015NOVA110073.458Ornithorhynchus_anatinus
ENSORLG00000027761-10076.538ENSOCUG00000017622NOVA110075.385Oryctolagus_cuniculus
ENSORLG00000027761-9986.187ENSORLG00020004573nova19886.948Oryzias_latipes_hni
ENSORLG00000027761-100100.000ENSORLG00020019124-100100.000Oryzias_latipes_hni
ENSORLG00000027761-9788.050ENSORLG00015000650nova19986.895Oryzias_latipes_hsok
ENSORLG00000027761-100100.000ENSORLG00015007890-100100.000Oryzias_latipes_hsok
ENSORLG00000027761-9985.798ENSOMEG00000015479nova19787.071Oryzias_melastigma
ENSORLG00000027761-10099.615ENSOMEG00000022949-10099.615Oryzias_melastigma
ENSORLG00000027761-9976.493ENSOGAG00000025938NOVA110075.337Otolemur_garnettii
ENSORLG00000027761-9177.564ENSOARG00000004870NOVA19977.350Ovis_aries
ENSORLG00000027761-9281.208ENSPPAG00000038980NOVA19979.866Pan_paniscus
ENSORLG00000027761-10076.538ENSPPRG00000015429NOVA110075.385Panthera_pardus
ENSORLG00000027761-9181.490ENSPTIG00000009518NOVA19080.135Panthera_tigris_altaica
ENSORLG00000027761-10076.538ENSPTRG00000006229NOVA110075.385Pan_troglodytes
ENSORLG00000027761-10076.538ENSPANG00000004891NOVA110075.385Papio_anubis
ENSORLG00000027761-10092.621ENSPKIG00000005431nova29992.621Paramormyrops_kingsleyae
ENSORLG00000027761-10076.699ENSPKIG00000001428NOVA110077.282Paramormyrops_kingsleyae
ENSORLG00000027761-9277.070ENSPSIG00000007132NOVA19977.350Pelodiscus_sinensis
ENSORLG00000027761-10094.412ENSPMGG00000009801-10094.412Periophthalmus_magnuspinnatus
ENSORLG00000027761-9987.209ENSPMGG00000005975nova19987.016Periophthalmus_magnuspinnatus
ENSORLG00000027761-10076.538ENSPEMG00000006503Nova110075.385Peromyscus_maniculatus_bairdii
ENSORLG00000027761-9675.448ENSPCIG00000024683NOVA110074.169Phascolarctos_cinereus
ENSORLG00000027761-9192.793ENSPFOG00000018009nova19993.018Poecilia_formosa
ENSORLG00000027761-10098.459ENSPFOG00000016392-10098.459Poecilia_formosa
ENSORLG00000027761-9986.019ENSPLAG00000015391nova19985.825Poecilia_latipinna
ENSORLG00000027761-10095.938ENSPLAG00000003504-10095.938Poecilia_latipinna
ENSORLG00000027761-10098.459ENSPMEG00000019140-10098.459Poecilia_mexicana
ENSORLG00000027761-9886.535ENSPMEG00000016376nova19986.337Poecilia_mexicana
ENSORLG00000027761-9986.187ENSPREG00000011614nova19985.992Poecilia_reticulata
ENSORLG00000027761-10095.745ENSPREG00000018946-10095.745Poecilia_reticulata
ENSORLG00000027761-10076.538ENSPPYG00000005714NOVA110075.385Pongo_abelii
ENSORLG00000027761-9672.772ENSPCAG00000010303NOVA110063.077Procavia_capensis
ENSORLG00000027761-9675.887ENSPCOG00000016857NOVA19977.286Propithecus_coquereli
ENSORLG00000027761-10075.962ENSPVAG00000002564NOVA110075.000Pteropus_vampyrus
ENSORLG00000027761-10098.844ENSPNYG00000022283-10098.844Pundamilia_nyererei
ENSORLG00000027761-9688.485ENSPNYG00000015521nova19188.283Pundamilia_nyererei
ENSORLG00000027761-10084.542ENSPNAG00000024351nova19789.438Pygocentrus_nattereri
ENSORLG00000027761-10091.650ENSPNAG00000009171nova210091.650Pygocentrus_nattereri
ENSORLG00000027761-9976.070ENSRNOG00000031440Nova19977.137Rattus_norvegicus
ENSORLG00000027761-9281.208ENSRBIG00000026331NOVA19979.866Rhinopithecus_bieti
ENSORLG00000027761-9181.490ENSRROG00000040203NOVA110080.135Rhinopithecus_roxellana
ENSORLG00000027761-9578.645ENSSBOG00000034029NOVA110077.618Saimiri_boliviensis_boliviensis
ENSORLG00000027761-9676.123ENSSHAG00000004907NOVA110074.941Sarcophilus_harrisii
ENSORLG00000027761-6592.593ENSSFOG00015010909-7992.593Scleropages_formosus
ENSORLG00000027761-10086.214ENSSFOG00015004204nova210087.379Scleropages_formosus
ENSORLG00000027761-5367.553ENSSFOG00015010887NOVA16877.576Scleropages_formosus
ENSORLG00000027761-10086.538ENSSMAG00000006485nova17286.346Scophthalmus_maximus
ENSORLG00000027761-10097.495ENSSMAG00000020189-10097.495Scophthalmus_maximus
ENSORLG00000027761-9688.235ENSSDUG00000020704nova19988.032Seriola_dumerili
ENSORLG00000027761-10094.412ENSSDUG00000001795-10094.412Seriola_dumerili
ENSORLG00000027761-10087.115ENSSLDG00000006713nova19888.462Seriola_lalandi_dorsalis
ENSORLG00000027761-10098.651ENSSLDG00000003193-10098.651Seriola_lalandi_dorsalis
ENSORLG00000027761-9078.373ENSSARG00000002599NOVA110077.302Sorex_araneus
ENSORLG00000027761-9675.448ENSSPUG00000006539NOVA110074.169Sphenodon_punctatus
ENSORLG00000027761-9987.476ENSSPAG00000001033nova19986.756Stegastes_partitus
ENSORLG00000027761-10098.844ENSSPAG00000008284NOVA110098.844Stegastes_partitus
ENSORLG00000027761-10076.538ENSSSCG00000024396NOVA110075.385Sus_scrofa
ENSORLG00000027761-10076.538ENSTGUG00000011799NOVA110075.385Taeniopygia_guttata
ENSORLG00000027761-10098.073ENSTRUG00000016275-10098.073Takifugu_rubripes
ENSORLG00000027761-9192.793ENSTNIG00000011634nova110087.398Tetraodon_nigroviridis
ENSORLG00000027761-8898.534ENSTNIG00000018993NOVA19898.534Tetraodon_nigroviridis
ENSORLG00000027761-10076.154ENSTBEG00000009774NOVA110075.192Tupaia_belangeri
ENSORLG00000027761-9168.094ENSTTRG00000006010NOVA110067.452Tursiops_truncatus
ENSORLG00000027761-10076.538ENSUAMG00000025822NOVA110075.385Ursus_americanus
ENSORLG00000027761-9675.448ENSUMAG00000023125NOVA110074.169Ursus_maritimus
ENSORLG00000027761-10076.538ENSVPAG00000007807NOVA110075.385Vicugna_pacos
ENSORLG00000027761-9281.208ENSVVUG00000029367NOVA19979.866Vulpes_vulpes
ENSORLG00000027761-10076.775ENSXETG00000010244nova110077.351Xenopus_tropicalis
ENSORLG00000027761-10094.220ENSXCOG00000009738NOVA110094.220Xiphophorus_couchianus
ENSORLG00000027761-9886.301ENSXMAG00000017880nova19985.328Xiphophorus_maculatus
ENSORLG00000027761-10098.073ENSXMAG00000013130-10098.073Xiphophorus_maculatus

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