EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000027892 (Gene tree)
Gene ID: 101167273
Gene Symbol: RAB29
Alias: -
Full Name: ras-related protein Rab-7L1
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 6475 bases
Position: chr7:28348876-28355350
Accession: 101167273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000037736	MMR_HSR1	PF01926.23	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000028062	RAB29-201	3093	XM_004086316	ENSORLP00000037736	204 (aa)	XP_004086364	UPI0002A4A5BF

Gene Model

Click here to download ENSORLG00000027892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000027892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000027892	RAB29	89	30.808	ENSORLG00000026197	rab6a	92	30.808
ENSORLG00000027892	RAB29	91	37.234	ENSORLG00000003902	rab12	77	36.979
ENSORLG00000027892	RAB29	98	35.000	ENSORLG00000006628	-	93	35.000
ENSORLG00000027892	RAB29	89	34.615	ENSORLG00000001098	si:dkey-16l2.16	83	34.615
ENSORLG00000027892	RAB29	83	33.918	ENSORLG00000015284	-	55	33.918
ENSORLG00000027892	RAB29	98	33.000	ENSORLG00000006405	rab9b	93	33.000
ENSORLG00000027892	RAB29	83	35.088	ENSORLG00000029812	rab30	81	35.088
ENSORLG00000027892	RAB29	97	34.343	ENSORLG00000009609	rab18b	93	34.343
ENSORLG00000027892	RAB29	90	36.757	ENSORLG00000016555	rab3db	84	36.757
ENSORLG00000027892	RAB29	82	33.929	ENSORLG00000029090	-	81	33.929
ENSORLG00000027892	RAB29	88	34.254	ENSORLG00000008345	-	83	34.254
ENSORLG00000027892	RAB29	83	35.294	ENSORLG00000001850	RAB39B	78	35.294
ENSORLG00000027892	RAB29	60	31.967	ENSORLG00000012782	arl8bb	61	31.967
ENSORLG00000027892	RAB29	84	35.260	ENSORLG00000022335	rab42a	78	35.260
ENSORLG00000027892	RAB29	81	30.539	ENSORLG00000025819	-	87	30.539
ENSORLG00000027892	RAB29	98	34.500	ENSORLG00000017806	rab9a	97	34.500
ENSORLG00000027892	RAB29	82	34.132	ENSORLG00000004624	rab18a	79	34.132
ENSORLG00000027892	RAB29	86	31.818	ENSORLG00000027669	RAB41	81	31.818
ENSORLG00000027892	RAB29	81	32.934	ENSORLG00000003882	rab5c	74	32.934
ENSORLG00000027892	RAB29	80	30.120	ENSORLG00000003681	rheb	86	30.120
ENSORLG00000027892	RAB29	84	33.908	ENSORLG00000015307	rab11ba	77	33.908
ENSORLG00000027892	RAB29	90	34.973	ENSORLG00000014099	si:dkey-34d22.5	82	34.973
ENSORLG00000027892	RAB29	83	34.302	ENSORLG00000013938	rab11bb	76	34.302
ENSORLG00000027892	RAB29	98	31.884	ENSORLG00000024116	RAB15	96	31.884
ENSORLG00000027892	RAB29	88	32.967	ENSORLG00000001351	-	87	32.967
ENSORLG00000027892	RAB29	84	36.047	ENSORLG00000025098	si:dkey-13a21.4	83	36.047
ENSORLG00000027892	RAB29	89	33.333	ENSORLG00000012261	rab5aa	80	33.333
ENSORLG00000027892	RAB29	84	32.370	ENSORLG00000016126	rab11al	77	32.370
ENSORLG00000027892	RAB29	83	36.257	ENSORLG00000028885	rab35b	98	33.816
ENSORLG00000027892	RAB29	88	32.258	ENSORLG00000016290	rab6bb	91	32.258
ENSORLG00000027892	RAB29	83	35.882	ENSORLG00000028104	rab1ab	81	35.882
ENSORLG00000027892	RAB29	84	34.503	ENSORLG00000000602	zgc:171927	78	34.503
ENSORLG00000027892	RAB29	90	33.000	ENSORLG00000021846	-	97	33.000
ENSORLG00000027892	RAB29	88	37.778	ENSORLG00000025395	-	87	37.778
ENSORLG00000027892	RAB29	84	34.483	ENSORLG00000018331	RAB11A	78	34.483
ENSORLG00000027892	RAB29	90	30.108	ENSORLG00000012158	rab25a	83	30.108
ENSORLG00000027892	RAB29	98	30.097	ENSORLG00000016135	rab25b	98	30.049
ENSORLG00000027892	RAB29	87	35.233	ENSORLG00000029921	-	87	35.233
ENSORLG00000027892	RAB29	75	33.987	ENSORLG00000030642	zgc:101559	64	33.987
ENSORLG00000027892	RAB29	87	34.536	ENSORLG00000007406	rab14	87	34.536
ENSORLG00000027892	RAB29	97	31.754	ENSORLG00000030109	rab33ba	88	31.754
ENSORLG00000027892	RAB29	67	35.211	ENSORLG00000002071	-	57	35.211
ENSORLG00000027892	RAB29	86	34.463	ENSORLG00000024558	-	72	34.463
ENSORLG00000027892	RAB29	60	31.967	ENSORLG00000028909	arl8a	61	31.967
ENSORLG00000027892	RAB29	91	34.211	ENSORLG00000010115	rab23	83	35.122
ENSORLG00000027892	RAB29	85	34.483	ENSORLG00000010846	rab15	79	34.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000027892	RAB29	100	73.301	ENSATEG00000024739	RAB29	100	73.301	Anabas_testudineus
ENSORLG00000027892	RAB29	81	84.848	ENSACLG00000008602	RAB29	100	84.848	Astatotilapia_calliptera
ENSORLG00000027892	RAB29	100	70.388	ENSCVAG00000014038	RAB29	100	70.388	Cyprinodon_variegatus
ENSORLG00000027892	RAB29	98	50.500	ENSEBUG00000002259	RAB29	98	49.510	Eptatretus_burgeri
ENSORLG00000027892	RAB29	80	74.233	ENSFHEG00000015993	RAB29	80	74.233	Fundulus_heteroclitus
ENSORLG00000027892	RAB29	80	70.732	ENSGMOG00000018475	RAB29	99	70.732	Gadus_morhua
ENSORLG00000027892	RAB29	100	70.874	ENSGAFG00000000629	RAB29	100	70.874	Gambusia_affinis
ENSORLG00000027892	RAB29	100	71.845	ENSGACG00000010473	RAB29	99	71.845	Gasterosteus_aculeatus
ENSORLG00000027892	RAB29	100	77.885	ENSHBUG00000012594	RAB29	100	77.885	Haplochromis_burtoni
ENSORLG00000027892	RAB29	99	70.443	ENSKMAG00000017150	-	91	70.443	Kryptolebias_marmoratus
ENSORLG00000027892	RAB29	99	75.122	ENSLBEG00000006152	-	100	75.122	Labrus_bergylta
ENSORLG00000027892	RAB29	99	75.122	ENSLBEG00000018812	RAB29	100	75.122	Labrus_bergylta
ENSORLG00000027892	RAB29	84	56.725	ENSLACG00000002523	RAB29	98	50.495	Latimeria_chalumnae
ENSORLG00000027892	RAB29	100	73.301	ENSMAMG00000006963	RAB29	100	73.301	Mastacembelus_armatus
ENSORLG00000027892	RAB29	100	77.404	ENSMZEG00005026799	RAB29	100	77.404	Maylandia_zebra
ENSORLG00000027892	RAB29	100	74.757	ENSMALG00000018436	RAB29	90	74.757	Monopterus_albus
ENSORLG00000027892	RAB29	79	83.851	ENSNBRG00000008714	RAB29	71	83.851	Neolamprologus_brichardi
ENSORLG00000027892	RAB29	100	76.923	ENSONIG00000014892	RAB29	100	76.923	Oreochromis_niloticus
ENSORLG00000027892	RAB29	100	96.569	ENSORLG00020005240	RAB29	100	96.569	Oryzias_latipes_hni
ENSORLG00000027892	RAB29	100	98.529	ENSORLG00015020441	-	100	98.529	Oryzias_latipes_hsok
ENSORLG00000027892	RAB29	100	92.647	ENSOMEG00000000336	RAB29	100	92.647	Oryzias_melastigma
ENSORLG00000027892	RAB29	86	75.429	ENSPMGG00000008290	-	100	69.118	Periophthalmus_magnuspinnatus
ENSORLG00000027892	RAB29	100	65.049	ENSPFOG00000013066	RAB29	99	65.049	Poecilia_formosa
ENSORLG00000027892	RAB29	99	66.010	ENSPLAG00000002600	RAB29	95	66.010	Poecilia_latipinna
ENSORLG00000027892	RAB29	100	65.534	ENSPMEG00000021807	RAB29	100	65.534	Poecilia_mexicana
ENSORLG00000027892	RAB29	100	68.932	ENSPREG00000020276	RAB29	100	68.932	Poecilia_reticulata
ENSORLG00000027892	RAB29	100	77.404	ENSPNYG00000015355	RAB29	100	77.404	Pundamilia_nyererei
ENSORLG00000027892	RAB29	100	70.531	ENSSDUG00000006543	RAB29	100	70.531	Seriola_dumerili
ENSORLG00000027892	RAB29	84	56.140	ENSSPUG00000015007	RAB29	84	56.140	Sphenodon_punctatus
ENSORLG00000027892	RAB29	100	69.903	ENSSPAG00000002062	RAB29	100	69.903	Stegastes_partitus
ENSORLG00000027892	RAB29	100	70.388	ENSXCOG00000016370	RAB29	100	70.388	Xiphophorus_couchianus
ENSORLG00000027892	RAB29	100	70.874	ENSXMAG00000029823	RAB29	100	70.874	Xiphophorus_maculatus