EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00000028011 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes
Status: putative
Strand: Plus strand
Length: 4691 bases
Position: chr4:4120747-4125437
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00000044646	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00000037005	-	4593	-	ENSORLP00000044646	435 (aa)	-	-

Gene Model

Click here to download ENSORLG00000028011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00000028011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00000028011	-	55	32.806	ENSORLG00000013294	-	73	33.600
ENSORLG00000028011	-	94	91.422	ENSORLG00000002031	-	97	91.422
ENSORLG00000028011	-	51	32.751	ENSORLG00000010984	si:ch211-113e8.5	67	32.751

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00000028011	-	60	44.898	ENSAPOG00000006502	-	54	44.898	Acanthochromis_polyacanthus
ENSORLG00000028011	-	93	50.864	ENSAOCG00000004579	-	97	50.864	Amphiprion_ocellaris
ENSORLG00000028011	-	93	51.111	ENSAPEG00000014403	-	100	51.111	Amphiprion_percula
ENSORLG00000028011	-	90	49.746	ENSATEG00000015654	-	94	49.746	Anabas_testudineus
ENSORLG00000028011	-	93	50.000	ENSACLG00000014795	-	93	50.000	Astatotilapia_calliptera
ENSORLG00000028011	-	51	41.026	ENSAMXG00000019109	-	92	41.026	Astyanax_mexicanus
ENSORLG00000028011	-	58	35.227	ENSAMXG00000006064	-	85	35.227	Astyanax_mexicanus
ENSORLG00000028011	-	51	42.932	ENSAMXG00000021387	-	68	42.932	Astyanax_mexicanus
ENSORLG00000028011	-	52	38.961	ENSAMXG00000033117	-	82	34.737	Astyanax_mexicanus
ENSORLG00000028011	-	55	35.060	ENSCVAG00000005778	-	83	35.060	Cyprinodon_variegatus
ENSORLG00000028011	-	54	37.500	ENSFHEG00000020783	-	92	37.500	Fundulus_heteroclitus
ENSORLG00000028011	-	53	36.757	ENSGAFG00000020826	-	93	36.757	Gambusia_affinis
ENSORLG00000028011	-	54	40.239	ENSHBUG00000001242	-	64	40.239	Haplochromis_burtoni
ENSORLG00000028011	-	91	50.732	ENSKMAG00000004774	-	98	50.732	Kryptolebias_marmoratus
ENSORLG00000028011	-	55	42.975	ENSLBEG00000019652	-	84	43.388	Labrus_bergylta
ENSORLG00000028011	-	70	34.516	ENSLOCG00000016496	-	86	34.516	Lepisosteus_oculatus
ENSORLG00000028011	-	51	33.632	ENSMAMG00000021970	-	96	33.632	Mastacembelus_armatus
ENSORLG00000028011	-	94	49.879	ENSMAMG00000015600	-	96	49.879	Mastacembelus_armatus
ENSORLG00000028011	-	50	34.234	ENSNBRG00000002136	-	76	34.234	Neolamprologus_brichardi
ENSORLG00000028011	-	98	92.056	ENSORLG00020008323	-	99	92.056	Oryzias_latipes_hni
ENSORLG00000028011	-	60	97.692	ENSORLG00020008286	-	90	97.692	Oryzias_latipes_hni
ENSORLG00000028011	-	99	90.888	ENSORLG00015004522	-	97	90.888	Oryzias_latipes_hsok
ENSORLG00000028011	-	77	69.613	ENSOMEG00000010594	-	93	69.613	Oryzias_melastigma
ENSORLG00000028011	-	54	45.699	ENSPFOG00000015865	-	95	45.699	Poecilia_formosa
ENSORLG00000028011	-	59	44.792	ENSPFOG00000015875	-	89	44.792	Poecilia_formosa
ENSORLG00000028011	-	57	60.000	ENSPFOG00000016787	-	99	60.000	Poecilia_formosa
ENSORLG00000028011	-	66	44.330	ENSPFOG00000012732	-	92	44.330	Poecilia_formosa
ENSORLG00000028011	-	51	45.876	ENSPFOG00000013109	-	92	45.876	Poecilia_formosa
ENSORLG00000028011	-	59	43.781	ENSPFOG00000000191	-	75	43.781	Poecilia_formosa
ENSORLG00000028011	-	53	37.629	ENSPFOG00000006124	-	91	37.629	Poecilia_formosa
ENSORLG00000028011	-	65	46.524	ENSPFOG00000013349	-	88	46.524	Poecilia_formosa
ENSORLG00000028011	-	56	32.129	ENSPLAG00000018664	-	88	32.129	Poecilia_latipinna
ENSORLG00000028011	-	51	32.852	ENSPLAG00000018692	-	97	33.935	Poecilia_latipinna
ENSORLG00000028011	-	64	43.689	ENSPMEG00000005912	-	81	44.444	Poecilia_mexicana
ENSORLG00000028011	-	92	50.000	ENSPMEG00000000604	-	92	50.000	Poecilia_mexicana
ENSORLG00000028011	-	61	31.148	ENSPMEG00000000724	-	80	31.148	Poecilia_mexicana
ENSORLG00000028011	-	57	32.422	ENSPMEG00000006334	-	81	32.422	Poecilia_mexicana
ENSORLG00000028011	-	92	49.505	ENSPREG00000020440	-	92	49.505	Poecilia_reticulata
ENSORLG00000028011	-	60	46.486	ENSPREG00000001530	-	76	46.486	Poecilia_reticulata
ENSORLG00000028011	-	52	44.105	ENSPNYG00000010004	-	81	44.105	Pundamilia_nyererei
ENSORLG00000028011	-	60	43.590	ENSPNAG00000014932	-	72	43.590	Pygocentrus_nattereri
ENSORLG00000028011	-	59	41.579	ENSPNAG00000013132	-	74	41.579	Pygocentrus_nattereri
ENSORLG00000028011	-	62	39.175	ENSSMAG00000012187	-	63	39.175	Scophthalmus_maximus
ENSORLG00000028011	-	53	42.029	ENSSLDG00000010531	-	94	40.496	Seriola_lalandi_dorsalis
ENSORLG00000028011	-	56	36.694	ENSSPAG00000015927	-	91	38.306	Stegastes_partitus
ENSORLG00000028011	-	51	40.265	ENSSPAG00000017616	-	78	40.265	Stegastes_partitus
ENSORLG00000028011	-	51	38.938	ENSTNIG00000004275	-	96	38.938	Tetraodon_nigroviridis